RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W STN1P38960 494 aa2.4□□□□□ -2.03
SPF1YEL031W ECM10P39987 644 aa2.4□□□□□ -2.03
SPF1YEL031W GCD10P41814 478 aa2.4□□□□□ -2.03
SPF1YEL031W FET5P43561 622 aa2.4□□□□□ -2.03
SPF1YEL031W GCD14P46959 383 aaPredicted RBP2.4□□□□□ -2.03
SPF1YEL031W YJL132WP47014 750 aa2.4□□□□□ -2.03
SPF1YEL031W RSM26P47141 266 aa2.4□□□□□ -2.03
SPF1YEL031W MSB3P48566 633 aaPredicted RBP2.4□□□□□ -2.03
SPF1YEL031W MET13P53128 600 aa2.4□□□□□ -2.03
SPF1YEL031W TWF1P53250 332 aa2.4□□□□□ -2.03
SPF1YEL031W FPK1P53739 893 aa2.4□□□□□ -2.03
SPF1YEL031W SPP1Q03012 353 aa2.4□□□□□ -2.03
SPF1YEL031W YPL034WQ03083 165 aa2.4□□□□□ -2.03
SPF1YEL031W RSN1Q03516 953 aa2.4□□□□□ -2.03
SPF1YEL031W CEF1Q03654 590 aaPredicted RBP2.4□□□□□ -2.03
SPF1YEL031W VHS1Q03785 461 aa2.4□□□□□ -2.03
SPF1YEL031W YPQ2Q06328 317 aa2.4□□□□□ -2.03
SPF1YEL031W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SPF1YEL031W CUE5Q08412 411 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W SGT1Q08446 395 aa2.4□□□□□ -2.03
SPF1YEL031W YNG1Q08465 219 aa2.4□□□□□ -2.03
SPF1YEL031W WRS1Q12109 432 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W YDR018CQ12185 396 aa2.4□□□□□ -2.03
SPF1YEL031W TRM10Q12400 293 aa2.4□□□□□ -2.03
SPF1YEL031W YPR1Q12458 312 aa2.4□□□□□ -2.03
SPF1YEL031W YOR019WQ99248 730 aa2.4□□□□□ -2.03
SPF1YEL031W COS2P0CX12 379 aa2.4□□□□□ -2.03
SPF1YEL031W COS3P0CX13 379 aa2.4□□□□□ -2.03
SPF1YEL031W SAR1P20606 190 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W SAN1P22470 610 aa2.4□□□□□ -2.03
SPF1YEL031W AMD2P22580 549 aa2.4□□□□□ -2.03
SPF1YEL031W ESS1P22696 170 aa2.4□□□□□ -2.03
SPF1YEL031W YSP3P25036 478 aa2.4□□□□□ -2.03
SPF1YEL031W LCB1P25045 558 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W MCM5P29496 775 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W HXT3P32466 567 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W PET309P32522 965 aaPredicted RBP2.4□□□□□ -2.03
SPF1YEL031W NGR1P32831 672 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W PRP40P33203 583 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W MAE1P36013 669 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W SPC34P36131 295 aa2.4□□□□□ -2.03
SPF1YEL031W RIM2P38127 377 aa2.4□□□□□ -2.03
SPF1YEL031W EGD2P38879 174 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W EXO1P39875 702 aa2.4□□□□□ -2.03
SPF1YEL031W TPA1P40032 644 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W RTT105P40063 208 aa2.4□□□□□ -2.03
SPF1YEL031W YJL107CP42947 387 aa2.4□□□□□ -2.03
SPF1YEL031W RIM21P48565 533 aa2.4□□□□□ -2.03
SPF1YEL031W NQM1P53228 333 aaPredicted RBP2.4□□□□□ -2.03
SPF1YEL031W SOK2P53438 785 aaPredicted RBP2.4□□□□□ -2.03
SPF1YEL031W COG5P53951 403 aa2.4□□□□□ -2.03
SPF1YEL031W RPA49Q01080 415 aaPredicted RBP2.4□□□□□ -2.03
SPF1YEL031W EGD1Q02642 157 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W YPL107WQ02873 248 aa2.4□□□□□ -2.03
SPF1YEL031W INA17Q02888 182 aa2.4□□□□□ -2.03
SPF1YEL031W TDA1Q03533 586 aa2.4□□□□□ -2.03
SPF1YEL031W SNU56Q03782 492 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W SEG1Q04279 960 aa2.4□□□□□ -2.03
SPF1YEL031W GLO2Q05584 274 aa2.4□□□□□ -2.03
SPF1YEL031W FAR10Q06001 478 aa2.4□□□□□ -2.03
SPF1YEL031W DBP9Q06218 594 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W DXO1Q06349 442 aa2.4□□□□□ -2.03
SPF1YEL031W HDA3Q06623 655 aa2.4□□□□□ -2.03
SPF1YEL031W RSC3Q06639 885 aa2.4□□□□□ -2.03
SPF1YEL031W NTG2Q08214 380 aa2.4□□□□□ -2.03
SPF1YEL031W NBA1Q08229 501 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W PCL8Q08966 492 aa2.4□□□□□ -2.03
SPF1YEL031W FMP40Q08968 688 aaPredicted RBP2.4□□□□□ -2.03
SPF1YEL031W TMA46Q12000 345 aaKnown RBP2.4□□□□□ -2.03
SPF1YEL031W YRM1Q12340 786 aa2.4□□□□□ -2.03
SPF1YEL031W GRX6Q12438 231 aa2.4□□□□□ -2.03
SPF1YEL031W YOL159C-AQ3E769 90 aa2.4□□□□□ -2.03
SPF1YEL031W MHF1Q3E835 90 aa2.4□□□□□ -2.03
SPF1YEL031W RGS2Q99188 309 aa2.4□□□□□ -2.03
SPF1YEL031W YGL041W-AP0C5N3 154 aa2.39□□□□□ -2.03
SPF1YEL031W NFT1P0CE68 1218 aa2.39□□□□□ -2.03
SPF1YEL031W DSF1P0CX08 502 aa2.39□□□□□ -2.03
SPF1YEL031W YNR073CP0CX09 502 aa2.39□□□□□ -2.03
SPF1YEL031W CDC24P11433 854 aaPredicted RBP2.39□□□□□ -2.03
SPF1YEL031W KAR1P11927 433 aa2.39□□□□□ -2.03
SPF1YEL031W GCY1P14065 312 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
SPF1YEL031W GAP1P19145 602 aaPredicted RBP2.39□□□□□ -2.03
SPF1YEL031W PMA2P19657 947 aa2.39□□□□□ -2.03
SPF1YEL031W SLY1P22213 666 aa2.39□□□□□ -2.03
SPF1YEL031W GIT1P25346 518 aa2.39□□□□□ -2.03
SPF1YEL031W PUP3P25451 205 aaKnown RBP2.39□□□□□ -2.03
SPF1YEL031W HRR25P29295 494 aaKnown RBP2.39□□□□□ -2.03
SPF1YEL031W PTP2P29461 750 aa2.39□□□□□ -2.03
SPF1YEL031W PMT1P33775 817 aa2.39□□□□□ -2.03
SPF1YEL031W EAP1P36041 632 aaKnown RBP2.39□□□□□ -2.03
SPF1YEL031W YKL133CP36066 463 aa2.39□□□□□ -2.03
SPF1YEL031W RRN3P36070 627 aa2.39□□□□□ -2.03
SPF1YEL031W RDH54P38086 958 aa2.39□□□□□ -2.03
SPF1YEL031W ECM13P38195 257 aa2.39□□□□□ -2.03
SPF1YEL031W SRP72P38688 640 aaKnown RBP2.39□□□□□ -2.03
SPF1YEL031W APM2P38700 605 aa2.39□□□□□ -2.03
SPF1YEL031W YHR219WP38900 624 aa2.39□□□□□ -2.03
SPF1YEL031W SHU2P38957 223 aa2.39□□□□□ -2.03
SPF1YEL031W GAA1P39012 614 aa2.39□□□□□ -2.03
SPF1YEL031W FHL1P39521 936 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms