RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	TMA16	Q08687	178 aa		4.89	□□□□□ -1.63
RPB7	YDR404C	CSR2	Q12734	1121 aa		4.89	□□□□□ -1.63
RPB7	YDR404C	GSC2	P40989	1895 aa		4.88	□□□□□ -1.63
RPB7	YDR404C	MET8	P15807	274 aa		4.88	□□□□□ -1.63
RPB7	YDR404C	ERG8	P24521	451 aa		4.88	□□□□□ -1.63
RPB7	YDR404C	GEX2	P36173	615 aa		4.88	□□□□□ -1.63
RPB7	YDR404C	STV1	P37296	890 aa		4.88	□□□□□ -1.63
RPB7	YDR404C	YPT10	P38146	199 aa		4.88	□□□□□ -1.63
RPB7	YDR404C	BUD16	P39988	312 aa		4.88	□□□□□ -1.63
RPB7	YDR404C	FMP10	P40098	244 aa		4.88	□□□□□ -1.63
RPB7	YDR404C	ARG2	P40360	574 aa		4.88	□□□□□ -1.63
RPB7	YDR404C	SMX3	P54999	86 aa	Predicted RBP	4.88	□□□□□ -1.63
RPB7	YDR404C	TRS23	Q03784	219 aa		4.88	□□□□□ -1.63
RPB7	YDR404C	SKM1	Q12469	655 aa		4.88	□□□□□ -1.63
RPB7	YDR404C	RPB2	P08518	1224 aa	Known RBP	4.87	□□□□□ -1.63
RPB7	YDR404C	MRP7	P12687	371 aa		4.87	□□□□□ -1.63
RPB7	YDR404C	YPK1	P12688	680 aa	Known RBP	4.87	□□□□□ -1.63
RPB7	YDR404C	CDC43	P18898	376 aa		4.87	□□□□□ -1.63
RPB7	YDR404C	CMK1	P27466	446 aa	Known RBP	4.87	□□□□□ -1.63
RPB7	YDR404C	GMH1	P36125	273 aa		4.87	□□□□□ -1.63
RPB7	YDR404C	CTR1	P49573	406 aa		4.87	□□□□□ -1.63
RPB7	YDR404C	ASE1	P50275	885 aa		4.87	□□□□□ -1.63
RPB7	YDR404C	RBG2	P53295	368 aa	Known RBP	4.87	□□□□□ -1.63
RPB7	YDR404C	RCO1	Q04779	684 aa		4.87	□□□□□ -1.63
RPB7	YDR404C	VIP1	Q06685	1146 aa	Known RBP	4.87	□□□□□ -1.63
RPB7	YDR404C	BMS1	Q08965	1183 aa	Known RBP	4.87	□□□□□ -1.63
RPB7	YDR404C	NBP2	Q12163	236 aa		4.87	□□□□□ -1.63
RPB7	YDR404C	GRX6	Q12438	231 aa		4.87	□□□□□ -1.63
RPB7	YDR404C	RVB2	Q12464	471 aa	Known RBP	4.87	□□□□□ -1.63
RPB7	YDR404C	YBR255C-A	Q3E776	120 aa		4.87	□□□□□ -1.63
RPB7	YDR404C	AUS1	Q08409	1394 aa		4.87	□□□□□ -1.63
RPB7	YDR404C	YMR084W	A2P2R3	262 aa		4.86	□□□□□ -1.63
RPB7	YDR404C	FOB1	O13329	566 aa		4.86	□□□□□ -1.63
RPB7	YDR404C	RPL19A	P0CX82	189 aa	Known RBP	4.86	□□□□□ -1.63
RPB7	YDR404C	RPL19B	P0CX83	189 aa	Predicted RBP	4.86	□□□□□ -1.63
RPB7	YDR404C	HPR1	P17629	752 aa	Known RBP	4.86	□□□□□ -1.63
RPB7	YDR404C	PDE1	P22434	369 aa		4.86	□□□□□ -1.63
RPB7	YDR404C	LNP1	P38878	278 aa		4.86	□□□□□ -1.63
RPB7	YDR404C	YIL161W	P40449	235 aa	Known RBP	4.86	□□□□□ -1.63
RPB7	YDR404C	ARC1	P46672	376 aa	Known RBP	4.86	□□□□□ -1.63
RPB7	YDR404C	IMO32	P53219	342 aa		4.86	□□□□□ -1.63
RPB7	YDR404C	YGR117C	P53270	476 aa		4.86	□□□□□ -1.63
RPB7	YDR404C	TGS1	Q12052	315 aa		4.86	□□□□□ -1.63
RPB7	YDR404C	MRH1	Q12117	320 aa	Predicted RBP	4.86	□□□□□ -1.63
RPB7	YDR404C	ERG27	Q12452	347 aa	Known RBP	4.86	□□□□□ -1.63
RPB7	YDR404C	YER175W-A	Q8TGU4	54 aa		4.86	□□□□□ -1.63
RPB7	YDR404C	VCX1	Q99385	411 aa		4.86	□□□□□ -1.63
RPB7	YDR404C	TOR1	P35169	2470 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	YML003W	P0CF16	290 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	CDC24	P11433	854 aa	Predicted RBP	4.85	□□□□□ -1.63
RPB7	YDR404C	SPO16	P17122	198 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	HSP104	P31539	908 aa	Known RBP	4.85	□□□□□ -1.63
RPB7	YDR404C	LOT5	P34234	306 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	GLG1	P36143	616 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	APE3	P37302	537 aa	Known RBP	4.85	□□□□□ -1.63
RPB7	YDR404C	TDP1	P38319	544 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	YJL206C	P39529	758 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	PMT6	P42934	759 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	YGL082W	P53155	381 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	DUO1	P53168	247 aa	Known RBP	4.85	□□□□□ -1.63
RPB7	YDR404C	SPC98	P53540	846 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	YNL092W	P53934	400 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	TIM10	P87108	93 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	YSA1	Q01976	231 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	YDR179W-A	Q03983	463 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	TDA9	Q04545	1251 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	ENT4	Q07872	247 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
RPB7	YDR404C	SWT1	Q12104	458 aa		4.85	□□□□□ -1.63
RPB7	YDR404C	PRS5	Q12265	496 aa	Known RBP	4.85	□□□□□ -1.63
RPB7	YDR404C	NUM1	Q00402	2748 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	AAC1	P04710	309 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	AMD2	P22580	549 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	PIH1	P38768	344 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	YGR079W	P53249	370 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	YNR061C	P53747	219 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	YML119W	Q03208	357 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	NGL2	Q03264	515 aa	Known RBP	4.84	□□□□□ -1.63
RPB7	YDR404C	GTB1	Q04924	702 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	YDL073W	Q07454	984 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	PSK2	Q08217	1101 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	NUS1	Q12063	375 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	TAH18	Q12181	623 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	ERP4	Q12450	207 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	YOR111W	Q99210	232 aa		4.84	□□□□□ -1.63
RPB7	YDR404C	SUI3	P09064	285 aa	Known RBP	4.83	□□□□□ -1.64
RPB7	YDR404C	OLE1	P21147	510 aa	Known RBP	4.83	□□□□□ -1.64
RPB7	YDR404C	KIN3	P22209	435 aa		4.83	□□□□□ -1.64
RPB7	YDR404C	SGF29	P25554	259 aa		4.83	□□□□□ -1.64
RPB7	YDR404C	SAC6	P32599	642 aa	Known RBP	4.83	□□□□□ -1.64
RPB7	YDR404C	NFU1	P32860	256 aa		4.83	□□□□□ -1.64
RPB7	YDR404C	ALY1	P36117	915 aa		4.83	□□□□□ -1.64
RPB7	YDR404C	YBR225W	P38321	900 aa		4.83	□□□□□ -1.64
RPB7	YDR404C	PFK26	P40433	827 aa	Known RBP	4.83	□□□□□ -1.64
RPB7	YDR404C	UBP16	Q02863	499 aa		4.83	□□□□□ -1.64
RPB7	YDR404C	ATG23	Q06671	453 aa		4.83	□□□□□ -1.64
RPB7	YDR404C	YBR126W-A	Q8TGU7	68 aa		4.83	□□□□□ -1.64
RPB7	YDR404C	KGD2	P19262	463 aa	Predicted RBP	4.82	□□□□□ -1.64
RPB7	YDR404C	LRE1	P25579	583 aa	Known RBP	4.82	□□□□□ -1.64
RPB7	YDR404C	RFA2	P26754	273 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms