RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	YNL092W	P53934	400 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	UBP16	Q02863	499 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	ARX1	Q03862	593 aa	Known RBP	2.96	□□□□□ -1.94
TFB1	YDR311W	GYL1	Q04322	720 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	CRN1	Q06440	651 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	ATG23	Q06671	453 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	YDL242W	Q07746	117 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	YJR112W-A	Q3E743	109 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	AI5_ALPHA	Q9ZZX1	630 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	YRF1-4	O13559	1382 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	STE4	P18851	423 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	PWP1	P21304	576 aa	Known RBP	2.95	□□□□□ -1.94
TFB1	YDR311W	CLB1	P24868	471 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	RRP7	P25368	297 aa	Predicted RBP	2.95	□□□□□ -1.94
TFB1	YDR311W	CNE1	P27825	502 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	CST26	P38226	397 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	RFC1	P38630	861 aa	Known RBP	2.95	□□□□□ -1.94
TFB1	YDR311W	FMP52	P40008	231 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	SSU1	P41930	458 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	YIP4	P53093	235 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	OAZ1	Q02803	292 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	VPS38	Q05919	439 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	MRD1	Q06106	887 aa	Known RBP	2.95	□□□□□ -1.94
TFB1	YDR311W	YSH1	Q06224	779 aa	Predicted RBP	2.95	□□□□□ -1.94
TFB1	YDR311W	MRI1	Q06489	411 aa	Known RBP	2.95	□□□□□ -1.94
TFB1	YDR311W	PDH1	Q12428	516 aa	Known RBP	2.95	□□□□□ -1.94
TFB1	YDR311W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
TFB1	YDR311W	CLB3	P24870	427 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	URA7	P28274	579 aa	Known RBP	2.95	□□□□□ -1.94
TFB1	YDR311W	CCL1	P37366	393 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	VID24	P38263	362 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	LNP1	P38878	278 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	CTK2	P46962	323 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	MCM6	P53091	1017 aa	Known RBP	2.95	□□□□□ -1.94
TFB1	YDR311W	VPS9	P54787	451 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	CIK1	Q01649	594 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	INA17	Q02888	182 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	TRS23	Q03784	219 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	SWA2	Q06677	668 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	CUE5	Q08412	411 aa	Known RBP	2.95	□□□□□ -1.94
TFB1	YDR311W	SMF3	Q12078	473 aa	Predicted RBP	2.95	□□□□□ -1.94
TFB1	YDR311W	RKI1	Q12189	258 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	Q0010	Q9ZZX9	128 aa		2.95	□□□□□ -1.94
TFB1	YDR311W	GAL80	P04387	435 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	SRP54	P20424	541 aa	Known RBP	2.94	□□□□□ -1.94
TFB1	YDR311W	ERG4	P25340	473 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	AAD3	P25612	363 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	YCR051W	P25631	222 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	ERV1	P27882	189 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	PMT1	P33775	817 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	KES1	P35844	434 aa	Known RBP	2.94	□□□□□ -1.94
TFB1	YDR311W	AFG3	P39925	761 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	YIL166C	P40445	542 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	SEC28	P40509	296 aa	Known RBP	2.94	□□□□□ -1.94
TFB1	YDR311W	MSY1	P48527	492 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	CTR1	P49573	406 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	MNN10	P50108	393 aa	Known RBP	2.94	□□□□□ -1.94
TFB1	YDR311W	YGR066C	P53242	292 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	NNF2	P53253	936 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	YAT1	P80235	687 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	UFO1	Q04511	668 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	ROY1	Q04847	553 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	FMP45	Q07651	309 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	YPL216W	Q08964	1102 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	LAM4	P38800	1345 aa		2.94	□□□□□ -1.94
TFB1	YDR311W	PCT1	P13259	424 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	KGD1	P20967	1014 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	STE11	P23561	717 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	YIH1	P25637	258 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	YKL100C	P34248	587 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	APE3	P37302	537 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	APL3	P38065	1025 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	ERC1	P38767	581 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	FUN12	P39730	1002 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	GDI1	P39958	451 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	BUR6	P40096	142 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	EFM4	P40516	257 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	RPS7B	P48164	190 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	TCB2	P48231	1178 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	MSE1	P48525	536 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	PHO23	P50947	330 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	RPA49	Q01080	415 aa	Predicted RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	PEX25	Q02969	394 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	YDR239C	Q03780	787 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	YDR109C	Q04585	715 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	YML053C	Q04978	212 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	LUC7	Q07508	261 aa	Predicted RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	ATG29	Q12092	213 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	NFI1	Q12216	726 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	GPM3	Q12326	303 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	AFI1	Q99222	893 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	ALG7	P07286	448 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	ABF1	P14164	731 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	KGD2	P19262	463 aa	Predicted RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	CDC15	P27636	974 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	PDB1	P32473	366 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	SIP1	P32578	815 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	WBP1	P33767	430 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	HES1	P35843	434 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	TCD2	P36101	447 aa	Known RBP	2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 74.4 ms