RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C PSP1P50896 841 aaKnown RBP3.12□□□□□ -1.91
SNU56YDR240C ESBP6P53918 673 aa3.12□□□□□ -1.91
SNU56YDR240C MCP2Q06567 569 aa3.12□□□□□ -1.91
SNU56YDR240C APL5Q08951 932 aaKnown RBP3.12□□□□□ -1.91
SNU56YDR240C RRP6Q12149 733 aaKnown RBP3.12□□□□□ -1.91
SNU56YDR240C CDC23P16522 626 aa3.11□□□□□ -1.91
SNU56YDR240C LHS1P36016 881 aa3.11□□□□□ -1.91
SNU56YDR240C AAP1P37898 856 aaKnown RBP3.11□□□□□ -1.91
SNU56YDR240C ADE17P38009 592 aaKnown RBP3.11□□□□□ -1.91
SNU56YDR240C EXO84P38261 753 aa3.11□□□□□ -1.91
SNU56YDR240C NPR3P38742 1146 aa3.11□□□□□ -1.91
SNU56YDR240C ERR3P42222 437 aa3.11□□□□□ -1.91
SNU56YDR240C ASI1P54074 624 aa3.11□□□□□ -1.91
SNU56YDR240C CTL1Q03220 320 aaKnown RBP3.11□□□□□ -1.91
SNU56YDR240C YER145C-AA0A023PYF4 145 aa3.1□□□□□ -1.91
SNU56YDR240C CBP1P07252 654 aa3.1□□□□□ -1.91
SNU56YDR240C SRP54P20424 541 aaKnown RBP3.1□□□□□ -1.91
SNU56YDR240C CLB4P24871 460 aa3.1□□□□□ -1.91
SNU56YDR240C TOM20P35180 183 aa3.1□□□□□ -1.91
SNU56YDR240C GRX7P38068 203 aa3.1□□□□□ -1.91
SNU56YDR240C YBR138CP38277 524 aa3.1□□□□□ -1.91
SNU56YDR240C PUG1P40100 303 aa3.1□□□□□ -1.91
SNU56YDR240C HOS2P53096 452 aaPredicted RBP3.1□□□□□ -1.91
SNU56YDR240C ARP10Q04549 284 aa3.1□□□□□ -1.91
SNU56YDR240C RTT103Q05543 409 aa3.1□□□□□ -1.91
SNU56YDR240C HIM1Q06674 414 aa3.1□□□□□ -1.91
SNU56YDR240C FMP46P36141 133 aaKnown RBP3.09□□□□□ -1.91
SNU56YDR240C MRPL36P36531 177 aa3.09□□□□□ -1.91
SNU56YDR240C YPK3P38070 525 aa3.09□□□□□ -1.91
SNU56YDR240C UBP13P38187 747 aa3.09□□□□□ -1.91
SNU56YDR240C CTK2P46962 323 aa3.09□□□□□ -1.91
SNU56YDR240C CUL3P53202 744 aa3.09□□□□□ -1.91
SNU56YDR240C GIS2P53849 153 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
SNU56YDR240C PFA5Q03289 374 aa3.09□□□□□ -1.91
SNU56YDR240C RSF1Q05043 376 aa3.09□□□□□ -1.91
SNU56YDR240C ATP2P00830 511 aaKnown RBP3.09□□□□□ -1.92
SNU56YDR240C GUK1P15454 187 aaKnown RBP3.09□□□□□ -1.92
SNU56YDR240C PHO81P17442 1178 aa3.09□□□□□ -1.92
SNU56YDR240C CLB2P24869 491 aa3.09□□□□□ -1.92
SNU56YDR240C SAC1P32368 623 aaKnown RBP3.09□□□□□ -1.92
SNU56YDR240C RAD24P32641 659 aa3.09□□□□□ -1.92
SNU56YDR240C SOF1P33750 489 aaKnown RBP3.09□□□□□ -1.92
SNU56YDR240C NTR2P36118 322 aaPredicted RBP3.09□□□□□ -1.92
SNU56YDR240C SEC31P38968 1273 aaKnown RBP3.09□□□□□ -1.92
SNU56YDR240C IAH1P41734 238 aa3.09□□□□□ -1.92
SNU56YDR240C ASE1P50275 885 aa3.09□□□□□ -1.92
SNU56YDR240C YNL234WP53857 426 aa3.09□□□□□ -1.92
SNU56YDR240C CSL4P53859 292 aaPredicted RBP3.09□□□□□ -1.92
SNU56YDR240C STP3Q05937 343 aa3.09□□□□□ -1.92
SNU56YDR240C YLR352WQ06479 807 aa3.09□□□□□ -1.92
SNU56YDR240C PET111P08468 800 aa3.08□□□□□ -1.92
SNU56YDR240C KRS1P15180 591 aaKnown RBP3.08□□□□□ -1.92
SNU56YDR240C HNM1P19807 563 aa3.08□□□□□ -1.92
SNU56YDR240C RPN2P32565 945 aaKnown RBP3.08□□□□□ -1.92
SNU56YDR240C YHL041WP38730 149 aa3.08□□□□□ -1.92
SNU56YDR240C YJL070CP40361 888 aa3.08□□□□□ -1.92
SNU56YDR240C ATG27P46989 271 aa3.08□□□□□ -1.92
SNU56YDR240C SCW10Q04951 389 aa3.08□□□□□ -1.92
SNU56YDR240C CRN1Q06440 651 aa3.08□□□□□ -1.92
SNU56YDR240C CHO1P08456 276 aa3.07□□□□□ -1.92
SNU56YDR240C RAP1P11938 827 aa3.07□□□□□ -1.92
SNU56YDR240C NCP1P16603 691 aaKnown RBP3.07□□□□□ -1.92
SNU56YDR240C TKL1P23254 680 aaKnown RBP3.07□□□□□ -1.92
SNU56YDR240C MGR1P25573 417 aa3.07□□□□□ -1.92
SNU56YDR240C TFC3P34111 1160 aa3.07□□□□□ -1.92
SNU56YDR240C YMR230W-AQ3E7B5 62 aa3.07□□□□□ -1.92
SNU56YDR240C YCL049CP25577 312 aa3.06□□□□□ -1.92
SNU56YDR240C SEC1P30619 724 aaKnown RBP3.06□□□□□ -1.92
SNU56YDR240C SRB5P32585 307 aa3.06□□□□□ -1.92
SNU56YDR240C ECM10P39987 644 aa3.06□□□□□ -1.92
SNU56YDR240C CRZ1P53968 678 aa3.06□□□□□ -1.92
SNU56YDR240C PMS1P14242 873 aa3.05□□□□□ -1.92
SNU56YDR240C PDR3P33200 976 aa3.05□□□□□ -1.92
SNU56YDR240C YIR014WP40570 242 aa3.05□□□□□ -1.92
SNU56YDR240C RTS2P40962 232 aa3.05□□□□□ -1.92
SNU56YDR240C SWP82P43554 623 aa3.05□□□□□ -1.92
SNU56YDR240C SGF73P53165 657 aa3.05□□□□□ -1.92
SNU56YDR240C IST1P53843 298 aaPredicted RBP3.05□□□□□ -1.92
SNU56YDR240C MAK10Q02197 733 aa3.05□□□□□ -1.92
SNU56YDR240C RSM28Q03430 361 aa3.05□□□□□ -1.92
SNU56YDR240C TY2A-LR1P0C2J4 438 aa3.04□□□□□ -1.92
SNU56YDR240C TY2A-FP0CX61 438 aa3.04□□□□□ -1.92
SNU56YDR240C TY2A-GR2P0CX62 438 aa3.04□□□□□ -1.92
SNU56YDR240C PGI1P12709 554 aaKnown RBP3.04□□□□□ -1.92
SNU56YDR240C NOP1P15646 327 aaKnown RBP3.04□□□□□ -1.92
SNU56YDR240C RPB8P20436 146 aa3.04□□□□□ -1.92
SNU56YDR240C MSM1P22438 575 aa3.04□□□□□ -1.92
SNU56YDR240C TY2A-CP25383 438 aa3.04□□□□□ -1.92
SNU56YDR240C CDC15P27636 974 aa3.04□□□□□ -1.92
SNU56YDR240C GAC1P28006 793 aa3.04□□□□□ -1.92
SNU56YDR240C RFC1P38630 861 aaKnown RBP3.04□□□□□ -1.92
SNU56YDR240C ACA1P39970 489 aa3.04□□□□□ -1.92
SNU56YDR240C YMR178WQ03219 274 aaKnown RBP3.04□□□□□ -1.92
SNU56YDR240C TY2A-DR2Q03483 438 aa3.04□□□□□ -1.92
SNU56YDR240C EKI1Q03764 534 aa3.04□□□□□ -1.92
SNU56YDR240C NYV1Q12255 253 aa3.04□□□□□ -1.92
SNU56YDR240C TY2A-BQ12260 438 aa3.04□□□□□ -1.92
SNU56YDR240C TY2A-OR2Q12293 438 aa3.04□□□□□ -1.92
SNU56YDR240C TY2A-DR1Q12392 438 aa3.04□□□□□ -1.92
SNU56YDR240C TY2A-OR1Q12439 438 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms