RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W IOC4Q04213 475 aa4.57□□□□□ -1.68
SHR3YDL212W CRN1Q06440 651 aa4.57□□□□□ -1.68
SHR3YDL212W STE50P25344 346 aa4.56□□□□□ -1.68
SHR3YDL212W NTR2P36118 322 aaPredicted RBP4.56□□□□□ -1.68
SHR3YDL212W LSC1P53598 329 aaKnown RBP4.56□□□□□ -1.68
SHR3YDL212W MRPL13Q02204 264 aa4.56□□□□□ -1.68
SHR3YDL212W IZH1Q03419 316 aa4.56□□□□□ -1.68
SHR3YDL212W NUP53Q03790 475 aa4.56□□□□□ -1.68
SHR3YDL212W SWF1Q04629 336 aa4.56□□□□□ -1.68
SHR3YDL212W BLS1Q06071 122 aa4.56□□□□□ -1.68
SHR3YDL212W TMA16Q08687 178 aa4.56□□□□□ -1.68
SHR3YDL212W BUD7Q08754 746 aa4.56□□□□□ -1.68
SHR3YDL212W SPO16P17122 198 aa4.55□□□□□ -1.68
SHR3YDL212W LEU5P38702 357 aa4.55□□□□□ -1.68
SHR3YDL212W FAF1P40546 346 aaPredicted RBP4.55□□□□□ -1.68
SHR3YDL212W TES1P41903 349 aaKnown RBP4.55□□□□□ -1.68
SHR3YDL212W BNA1P47096 177 aa4.55□□□□□ -1.68
SHR3YDL212W VPS25P47142 202 aa4.55□□□□□ -1.68
SHR3YDL212W DCP2P53550 970 aaKnown RBP4.55□□□□□ -1.68
SHR3YDL212W YNR061CP53747 219 aa4.55□□□□□ -1.68
SHR3YDL212W ECM16Q04217 1267 aaKnown RBP4.55□□□□□ -1.68
SHR3YDL212W TPK1P06244 397 aa4.54□□□□□ -1.68
SHR3YDL212W NUP120P35729 1037 aa4.54□□□□□ -1.68
SHR3YDL212W MNN2P38069 597 aa4.54□□□□□ -1.68
SHR3YDL212W PSD1P39006 500 aa4.54□□□□□ -1.68
SHR3YDL212W IES5P40060 125 aa4.54□□□□□ -1.68
SHR3YDL212W TPM2P40414 161 aa4.54□□□□□ -1.68
SHR3YDL212W UBP8P50102 471 aa4.54□□□□□ -1.68
SHR3YDL212W PSP1P50896 841 aaKnown RBP4.54□□□□□ -1.68
SHR3YDL212W ARP9Q05123 467 aa4.54□□□□□ -1.68
SHR3YDL212W CSR1Q06705 408 aaKnown RBP4.54□□□□□ -1.68
SHR3YDL212W MRPL36P36531 177 aa4.53□□□□□ -1.68
SHR3YDL212W AAP1P37898 856 aaKnown RBP4.53□□□□□ -1.68
SHR3YDL212W CTF18P49956 741 aa4.53□□□□□ -1.68
SHR3YDL212W ASE1P50275 885 aa4.53□□□□□ -1.68
SHR3YDL212W REG1Q00816 1014 aa4.53□□□□□ -1.68
SHR3YDL212W DIG1Q03063 452 aaKnown RBP4.53□□□□□ -1.68
SHR3YDL212W PFA5Q03289 374 aa4.53□□□□□ -1.68
SHR3YDL212W POS5Q06892 414 aa4.53□□□□□ -1.68
SHR3YDL212W YLR049CQ12110 428 aa4.53□□□□□ -1.68
SHR3YDL212W SRB5P32585 307 aa4.52□□□□□ -1.69
SHR3YDL212W PCL6P40038 420 aa4.52□□□□□ -1.69
SHR3YDL212W ESBP6P53918 673 aa4.52□□□□□ -1.69
SHR3YDL212W VCX1Q99385 411 aa4.52□□□□□ -1.69
SHR3YDL212W MET30P39014 640 aa4.51□□□□□ -1.69
SHR3YDL212W ECM10P39987 644 aa4.51□□□□□ -1.69
SHR3YDL212W YIL169CP40442 995 aa4.51□□□□□ -1.69
SHR3YDL212W SMK1P41808 388 aa4.51□□□□□ -1.69
SHR3YDL212W STB2P46679 850 aa4.51□□□□□ -1.69
SHR3YDL212W CTK2P46962 323 aa4.51□□□□□ -1.69
SHR3YDL212W LHS1P36016 881 aa4.5□□□□□ -1.69
SHR3YDL212W SEC31P38968 1273 aaKnown RBP4.5□□□□□ -1.69
SHR3YDL212W YFR020WP43600 232 aa4.5□□□□□ -1.69
SHR3YDL212W YTP1P53584 459 aa4.5□□□□□ -1.69
SHR3YDL212W MAK10Q02197 733 aa4.5□□□□□ -1.69
SHR3YDL212W RSM28Q03430 361 aa4.5□□□□□ -1.69
SHR3YDL212W YOL159CQ08300 171 aa4.5□□□□□ -1.69
SHR3YDL212W GPN2Q08726 347 aaPredicted RBP4.5□□□□□ -1.69
SHR3YDL212W TRM8Q12009 286 aa4.5□□□□□ -1.69
SHR3YDL212W TKL1P23254 680 aaKnown RBP4.49□□□□□ -1.69
SHR3YDL212W ERG8P24521 451 aa4.49□□□□□ -1.69
SHR3YDL212W EFM2P38347 419 aa4.49□□□□□ -1.69
SHR3YDL212W MRX1P40050 688 aa4.49□□□□□ -1.69
SHR3YDL212W PFK26P40433 827 aaKnown RBP4.49□□□□□ -1.69
SHR3YDL212W SAP185P40856 1058 aa4.49□□□□□ -1.69
SHR3YDL212W HXT9P40885 567 aa4.49□□□□□ -1.69
SHR3YDL212W GTR1Q00582 310 aa4.49□□□□□ -1.69
SHR3YDL212W BET4Q00618 327 aa4.49□□□□□ -1.69
SHR3YDL212W PSK2Q08217 1101 aa4.49□□□□□ -1.69
SHR3YDL212W NDD1Q08887 554 aa4.49□□□□□ -1.69
SHR3YDL212W YOR019WQ99248 730 aa4.49□□□□□ -1.69
SHR3YDL212W SNF1P06782 633 aaKnown RBP4.48□□□□□ -1.69
SHR3YDL212W CBP1P07252 654 aa4.48□□□□□ -1.69
SHR3YDL212W RAD16P31244 790 aa4.48□□□□□ -1.69
SHR3YDL212W XRS2P33301 854 aa4.48□□□□□ -1.69
SHR3YDL212W SOF1P33750 489 aaKnown RBP4.48□□□□□ -1.69
SHR3YDL212W TFC3P34111 1160 aa4.48□□□□□ -1.69
SHR3YDL212W GCS1P35197 352 aa4.48□□□□□ -1.69
SHR3YDL212W YND1P40009 630 aa4.48□□□□□ -1.69
SHR3YDL212W IST3P40565 148 aaPredicted RBP4.48□□□□□ -1.69
SHR3YDL212W FCP1Q03254 732 aa4.48□□□□□ -1.69
SHR3YDL212W APL5Q08951 932 aaKnown RBP4.48□□□□□ -1.69
SHR3YDL212W CLB2P24869 491 aa4.47□□□□□ -1.69
SHR3YDL212W MAF1P41910 395 aa4.47□□□□□ -1.69
SHR3YDL212W IML2P47031 731 aa4.47□□□□□ -1.69
SHR3YDL212W SGF73P53165 657 aa4.47□□□□□ -1.69
SHR3YDL212W ECI1Q05871 280 aa4.47□□□□□ -1.69
SHR3YDL212W VID22Q05934 901 aa4.47□□□□□ -1.69
SHR3YDL212W RAP1P11938 827 aa4.46□□□□□ -1.7
SHR3YDL212W VRG4P40107 337 aa4.46□□□□□ -1.7
SHR3YDL212W RPN11P43588 306 aaKnown RBP4.46□□□□□ -1.7
SHR3YDL212W UTP21Q06078 939 aaPredicted RBP4.46□□□□□ -1.7
SHR3YDL212W GUK1P15454 187 aaKnown RBP4.45□□□□□ -1.7
SHR3YDL212W SAC1P32368 623 aaKnown RBP4.45□□□□□ -1.7
SHR3YDL212W PTH2P34222 208 aa4.45□□□□□ -1.7
SHR3YDL212W TEF4P36008 412 aaKnown RBP4.45□□□□□ -1.7
SHR3YDL212W PSY4P38193 441 aa4.45□□□□□ -1.7
SHR3YDL212W RFC1P38630 861 aaKnown RBP4.45□□□□□ -1.7
SHR3YDL212W FMP10P40098 244 aa4.45□□□□□ -1.7
SHR3YDL212W ATG16Q03818 150 aa4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms