RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W PMT3P47190 753 aa1.66□□□□□ -2.14
CDC36YDL165W TRI1Q05024 226 aa1.66□□□□□ -2.14
CDC36YDL165W TOP1P04786 769 aa1.65□□□□□ -2.15
CDC36YDL165W UBP12P39538 1254 aa1.65□□□□□ -2.15
CDC36YDL165W SIM1P40472 476 aa1.65□□□□□ -2.15
CDC36YDL165W YJL213WP40896 331 aa1.65□□□□□ -2.15
CDC36YDL165W GUF1P46943 645 aa1.65□□□□□ -2.15
CDC36YDL165W MSY1P48527 492 aa1.65□□□□□ -2.15
CDC36YDL165W HCR1Q05775 265 aaKnown RBP1.65□□□□□ -2.15
CDC36YDL165W AIM6Q07716 390 aa1.65□□□□□ -2.15
CDC36YDL165W TMA17Q12513 150 aa1.65□□□□□ -2.15
CDC36YDL165W RMP1Q12530 201 aa1.65□□□□□ -2.15
CDC36YDL165W EDE1P34216 1381 aa1.64□□□□□ -2.15
CDC36YDL165W RPL15AP05748 204 aaKnown RBP1.64□□□□□ -2.15
CDC36YDL165W PCT1P13259 424 aa1.64□□□□□ -2.15
CDC36YDL165W GID7P25569 745 aa1.64□□□□□ -2.15
CDC36YDL165W TFC4P33339 1025 aa1.64□□□□□ -2.15
CDC36YDL165W ENP1P38333 483 aaKnown RBP1.64□□□□□ -2.15
CDC36YDL165W COS10P52924 374 aa1.64□□□□□ -2.15
CDC36YDL165W ADE16P54113 591 aaKnown RBP1.64□□□□□ -2.15
CDC36YDL165W VPS64Q03944 604 aa1.64□□□□□ -2.15
CDC36YDL165W TMA64Q04600 565 aaKnown RBP1.64□□□□□ -2.15
CDC36YDL165W ECM38Q05902 660 aaPredicted RBP1.64□□□□□ -2.15
CDC36YDL165W AAD4Q07747 329 aa1.64□□□□□ -2.15
CDC36YDL165W QCR6P00127 147 aa1.63□□□□□ -2.15
CDC36YDL165W NAT1P12945 854 aaKnown RBP1.63□□□□□ -2.15
CDC36YDL165W ATS1P31386 333 aa1.63□□□□□ -2.15
CDC36YDL165W AGP2P38090 596 aa1.63□□□□□ -2.15
CDC36YDL165W TIF5P38431 405 aaKnown RBP1.63□□□□□ -2.15
CDC36YDL165W FPR3P38911 411 aaKnown RBP1.63□□□□□ -2.15
CDC36YDL165W MAK10Q02197 733 aa1.63□□□□□ -2.15
CDC36YDL165W CHO1P08456 276 aa1.62□□□□□ -2.15
CDC36YDL165W MCK1P21965 375 aaKnown RBP1.62□□□□□ -2.15
CDC36YDL165W ERG1P32476 496 aaKnown RBP1.62□□□□□ -2.15
CDC36YDL165W MIC60P36112 540 aa1.62□□□□□ -2.15
CDC36YDL165W YBP1P38315 674 aa1.62□□□□□ -2.15
CDC36YDL165W RPH1P39956 796 aa1.62□□□□□ -2.15
CDC36YDL165W RPT2P40327 437 aaKnown RBP1.62□□□□□ -2.15
CDC36YDL165W DUG1P43616 481 aaKnown RBP1.62□□□□□ -2.15
CDC36YDL165W TCB2P48231 1178 aa1.62□□□□□ -2.15
CDC36YDL165W HOL1P53389 586 aa1.62□□□□□ -2.15
CDC36YDL165W FOL1P53848 824 aa1.62□□□□□ -2.15
CDC36YDL165W ATG21Q02887 496 aa1.62□□□□□ -2.15
CDC36YDL165W IOC4Q04213 475 aa1.62□□□□□ -2.15
CDC36YDL165W PLP2Q12017 286 aa1.62□□□□□ -2.15
CDC36YDL165W YDL012CQ12489 107 aa1.62□□□□□ -2.15
CDC36YDL165W HSP82P02829 709 aaKnown RBP1.61□□□□□ -2.15
CDC36YDL165W COX11P19516 300 aaKnown RBP1.61□□□□□ -2.15
CDC36YDL165W ADE17P38009 592 aaKnown RBP1.61□□□□□ -2.15
CDC36YDL165W ERG7P38604 731 aa1.61□□□□□ -2.15
CDC36YDL165W SPC105P53148 917 aa1.61□□□□□ -2.15
CDC36YDL165W CWC22P53333 577 aaKnown RBP1.61□□□□□ -2.15
CDC36YDL165W PFA5Q03289 374 aa1.61□□□□□ -2.15
CDC36YDL165W UTP14Q04500 899 aaKnown RBP1.61□□□□□ -2.15
CDC36YDL165W GTB1Q04924 702 aa1.61□□□□□ -2.15
CDC36YDL165W PAL1Q05518 499 aaKnown RBP1.61□□□□□ -2.15
CDC36YDL165W TMC1Q08422 150 aaPredicted RBP1.61□□□□□ -2.15
CDC36YDL165W PSF3Q12146 194 aa1.61□□□□□ -2.15
CDC36YDL165W RNA1P11745 407 aaKnown RBP1.6□□□□□ -2.15
CDC36YDL165W RPS0AP32905 252 aaKnown RBP1.6□□□□□ -2.15
CDC36YDL165W MSN2P33748 704 aa1.6□□□□□ -2.15
CDC36YDL165W YGL039WP53183 348 aaKnown RBP1.6□□□□□ -2.15
CDC36YDL165W COG6P53959 839 aa1.6□□□□□ -2.15
CDC36YDL165W DOS2P54858 310 aa1.6□□□□□ -2.15
CDC36YDL165W CRD1Q07560 283 aa1.6□□□□□ -2.15
CDC36YDL165W YOL159CQ08300 171 aa1.6□□□□□ -2.15
CDC36YDL165W BAG7Q12128 409 aa1.6□□□□□ -2.15
CDC36YDL165W RVB2Q12464 471 aaKnown RBP1.6□□□□□ -2.15
CDC36YDL165W FAB1P34756 2278 aa1.6□□□□□ -2.15
CDC36YDL165W RPB8P20436 146 aa1.59□□□□□ -2.15
CDC36YDL165W TKL1P23254 680 aaKnown RBP1.59□□□□□ -2.15
CDC36YDL165W PRS1P32895 427 aaKnown RBP1.59□□□□□ -2.15
CDC36YDL165W UBP13P38187 747 aa1.59□□□□□ -2.15
CDC36YDL165W YBR071WP38243 211 aa1.59□□□□□ -2.15
CDC36YDL165W RFC1P38630 861 aaKnown RBP1.59□□□□□ -2.15
CDC36YDL165W YER130CP39959 443 aa1.59□□□□□ -2.15
CDC36YDL165W RGI2P40188 164 aa1.59□□□□□ -2.15
CDC36YDL165W RPR2P40571 144 aa1.59□□□□□ -2.15
CDC36YDL165W NIT2P47016 307 aa1.59□□□□□ -2.15
CDC36YDL165W IKS1P47042 667 aa1.59□□□□□ -2.15
CDC36YDL165W TIS11P47977 285 aa1.59□□□□□ -2.15
CDC36YDL165W RPM2Q02773 1202 aa1.59□□□□□ -2.15
CDC36YDL165W ERP1Q05359 219 aaKnown RBP1.59□□□□□ -2.15
CDC36YDL165W MHR1Q06630 226 aa1.59□□□□□ -2.15
CDC36YDL165W RLP24Q07915 199 aaKnown RBP1.59□□□□□ -2.15
CDC36YDL165W SET6Q12529 373 aa1.59□□□□□ -2.15
CDC36YDL165W MPD2Q99316 277 aa1.59□□□□□ -2.15
CDC36YDL165W SSB1P11484 613 aaKnown RBP1.58□□□□□ -2.16
CDC36YDL165W URK1P27515 501 aa1.58□□□□□ -2.16
CDC36YDL165W STV1P37296 890 aa1.58□□□□□ -2.16
CDC36YDL165W YLF2P38746 405 aa1.58□□□□□ -2.16
CDC36YDL165W SCS2P40075 244 aaKnown RBP1.58□□□□□ -2.16
CDC36YDL165W SSB2P40150 613 aaKnown RBP1.58□□□□□ -2.16
CDC36YDL165W RTT101P47050 842 aa1.58□□□□□ -2.16
CDC36YDL165W SDT1P53078 280 aa1.58□□□□□ -2.16
CDC36YDL165W PEX14P53112 341 aa1.58□□□□□ -2.16
CDC36YDL165W SLD3P53135 668 aa1.58□□□□□ -2.16
CDC36YDL165W NUP100Q02629 959 aa1.58□□□□□ -2.16
CDC36YDL165W YDL218WQ07629 317 aa1.58□□□□□ -2.16
CDC36YDL165W ICL2Q12031 575 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms