RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W RPS15Q01855 142 aaKnown RBP2.84□□□□□ -1.96
SPB1YCL054W RXT3Q07458 294 aa2.84□□□□□ -1.96
SPB1YCL054W DIA2Q08496 732 aaPredicted RBP2.84□□□□□ -1.96
SPB1YCL054W MLH3Q12083 715 aa2.84□□□□□ -1.96
SPB1YCL054W CHS5Q12114 671 aaKnown RBP2.84□□□□□ -1.96
SPB1YCL054W YLR302CO13544 120 aa2.83□□□□□ -1.96
SPB1YCL054W SIR3P06701 978 aa2.83□□□□□ -1.96
SPB1YCL054W CAP1P28495 268 aaKnown RBP2.83□□□□□ -1.96
SPB1YCL054W DSS4P32601 143 aa2.83□□□□□ -1.96
SPB1YCL054W SPT7P35177 1332 aa2.83□□□□□ -1.96
SPB1YCL054W EBP2P36049 427 aaKnown RBP2.83□□□□□ -1.96
SPB1YCL054W ALY1P36117 915 aa2.83□□□□□ -1.96
SPB1YCL054W SRO77P38163 1010 aa2.83□□□□□ -1.96
SPB1YCL054W RIM15P43565 1770 aa2.83□□□□□ -1.96
SPB1YCL054W MPS3P47069 682 aa2.83□□□□□ -1.96
SPB1YCL054W MUP1P50276 574 aa2.83□□□□□ -1.96
SPB1YCL054W UBC11P52492 156 aa2.83□□□□□ -1.96
SPB1YCL054W SNF12P53628 566 aa2.83□□□□□ -1.96
SPB1YCL054W EFR3Q03653 782 aaKnown RBP2.83□□□□□ -1.96
SPB1YCL054W ECM22Q05958 814 aaPredicted RBP2.83□□□□□ -1.96
SPB1YCL054W RIX7Q07844 837 aaKnown RBP2.83□□□□□ -1.96
SPB1YCL054W YBR126W-AQ8TGU7 68 aa2.83□□□□□ -1.96
SPB1YCL054W YOR111WQ99210 232 aa2.83□□□□□ -1.96
SPB1YCL054W TRP4P07285 380 aaPredicted RBP2.83□□□□□ -1.96
SPB1YCL054W YSP3P25036 478 aa2.83□□□□□ -1.96
SPB1YCL054W DPH2P32461 534 aa2.83□□□□□ -1.96
SPB1YCL054W YPT10P38146 199 aa2.83□□□□□ -1.96
SPB1YCL054W ARO9P38840 513 aaPredicted RBP2.83□□□□□ -1.96
SPB1YCL054W CCT6P39079 546 aa2.83□□□□□ -1.96
SPB1YCL054W YEL025CP39991 1188 aa2.83□□□□□ -1.96
SPB1YCL054W SLZ1P40167 298 aa2.83□□□□□ -1.96
SPB1YCL054W PAN2P53010 1115 aaPredicted RBP2.83□□□□□ -1.96
SPB1YCL054W YGR016WP53209 190 aa2.83□□□□□ -1.96
SPB1YCL054W FHN1P53279 174 aa2.83□□□□□ -1.96
SPB1YCL054W CTF4Q01454 927 aa2.83□□□□□ -1.96
SPB1YCL054W GET3Q12154 354 aaKnown RBP2.83□□□□□ -1.96
SPB1YCL054W BUG1Q12191 341 aa2.83□□□□□ -1.96
SPB1YCL054W Q0010Q9ZZX9 128 aa2.83□□□□□ -1.96
SPB1YCL054W VPS34P22543 875 aa2.82□□□□□ -1.96
SPB1YCL054W PRP28P23394 588 aa2.82□□□□□ -1.96
SPB1YCL054W LCB1P25045 558 aaKnown RBP2.82□□□□□ -1.96
SPB1YCL054W ANP1P32629 500 aa2.82□□□□□ -1.96
SPB1YCL054W TDP1P38319 544 aa2.82□□□□□ -1.96
SPB1YCL054W RGI2P40188 164 aa2.82□□□□□ -1.96
SPB1YCL054W MEP1P40260 492 aa2.82□□□□□ -1.96
SPB1YCL054W YIR042CP40586 236 aa2.82□□□□□ -1.96
SPB1YCL054W CIR1P42940 261 aa2.82□□□□□ -1.96
SPB1YCL054W HOS2P53096 452 aaPredicted RBP2.82□□□□□ -1.96
SPB1YCL054W YGL036WP53185 909 aaPredicted RBP2.82□□□□□ -1.96
SPB1YCL054W JJJ1P53863 590 aa2.82□□□□□ -1.96
SPB1YCL054W CRF1Q04930 467 aa2.82□□□□□ -1.96
SPB1YCL054W RRP9Q06506 573 aaKnown RBP2.82□□□□□ -1.96
SPB1YCL054W SEC53P07283 254 aaKnown RBP2.82□□□□□ -1.96
SPB1YCL054W CDC60P26637 1090 aaKnown RBP2.82□□□□□ -1.96
SPB1YCL054W YHR097CP38809 366 aaKnown RBP2.82□□□□□ -1.96
SPB1YCL054W JHD1P40034 492 aa2.82□□□□□ -1.96
SPB1YCL054W SGN1P40561 250 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SPB1YCL054W MET28P40573 187 aa2.82□□□□□ -1.96
SPB1YCL054W AMA1P50082 593 aa2.82□□□□□ -1.96
SPB1YCL054W YNL092WP53934 400 aa2.82□□□□□ -1.96
SPB1YCL054W YPL108WQ02872 168 aaPredicted RBP2.82□□□□□ -1.96
SPB1YCL054W ENB1Q08299 606 aa2.82□□□□□ -1.96
SPB1YCL054W IRC13Q08630 104 aa2.82□□□□□ -1.96
SPB1YCL054W GPN2Q08726 347 aaPredicted RBP2.82□□□□□ -1.96
SPB1YCL054W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SPB1YCL054W SMC6Q12749 1114 aa2.82□□□□□ -1.96
SPB1YCL054W YOR019WQ99248 730 aa2.82□□□□□ -1.96
SPB1YCL054W CBS1P14066 229 aa2.81□□□□□ -1.96
SPB1YCL054W APE1P14904 514 aa2.81□□□□□ -1.96
SPB1YCL054W THR1P17423 357 aaKnown RBP2.81□□□□□ -1.96
SPB1YCL054W ADK2P26364 225 aa2.81□□□□□ -1.96
SPB1YCL054W MVD1P32377 396 aaKnown RBP2.81□□□□□ -1.96
SPB1YCL054W PEX5P35056 612 aa2.81□□□□□ -1.96
SPB1YCL054W PHO11P35842 467 aa2.81□□□□□ -1.96
SPB1YCL054W CTP1P38152 299 aa2.81□□□□□ -1.96
SPB1YCL054W SDH8P38345 138 aa2.81□□□□□ -1.96
SPB1YCL054W PHO12P38693 467 aa2.81□□□□□ -1.96
SPB1YCL054W EAF6P47128 113 aa2.81□□□□□ -1.96
SPB1YCL054W RCF1Q03713 159 aa2.81□□□□□ -1.96
SPB1YCL054W YDR286CQ05530 114 aa2.81□□□□□ -1.96
SPB1YCL054W ALE1Q08548 619 aa2.81□□□□□ -1.96
SPB1YCL054W HUA2Q12134 243 aa2.81□□□□□ -1.96
SPB1YCL054W NOP58Q12499 511 aaKnown RBP2.81□□□□□ -1.96
SPB1YCL054W CYB2P00175 591 aa2.81□□□□□ -1.96
SPB1YCL054W CTT1P06115 562 aa2.81□□□□□ -1.96
SPB1YCL054W CAD1P24813 409 aaKnown RBP2.81□□□□□ -1.96
SPB1YCL054W CTS1P29029 562 aa2.81□□□□□ -1.96
SPB1YCL054W BRF1P29056 596 aa2.81□□□□□ -1.96
SPB1YCL054W VPH1P32563 840 aaKnown RBP2.81□□□□□ -1.96
SPB1YCL054W ELF1P36053 145 aa2.81□□□□□ -1.96
SPB1YCL054W MET18P40469 1032 aa2.81□□□□□ -1.96
SPB1YCL054W ARF3P40994 183 aaRIP-Chip data2.81□□□□□ -1.96not detected
SPB1YCL054W VMA13P41807 478 aaKnown RBP2.81□□□□□ -1.96
SPB1YCL054W BUD27P43573 796 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SPB1YCL054W IDS2P46958 469 aa2.81□□□□□ -1.96
SPB1YCL054W YJL163CP46996 555 aa2.81□□□□□ -1.96
SPB1YCL054W GPI8P49018 411 aa2.81□□□□□ -1.96
SPB1YCL054W ASE1P50275 885 aa2.81□□□□□ -1.96
SPB1YCL054W RRP46P53256 223 aaPredicted RBP2.81□□□□□ -1.96
SPB1YCL054W YNL058CP53947 316 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms