RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	PFA5	Q03289	374 aa		4.34	□□□□□ -1.71
APA1	YCL050C	YLR455W	Q06188	304 aa		4.34	□□□□□ -1.71
APA1	YCL050C	FRE3	Q08905	711 aa		4.34	□□□□□ -1.71
APA1	YCL050C	MRS6	P32864	603 aa	Known RBP	4.33	□□□□□ -1.72
APA1	YCL050C	IFA38	P38286	347 aa		4.33	□□□□□ -1.72
APA1	YCL050C	VPS41	P38959	992 aa		4.33	□□□□□ -1.72
APA1	YCL050C	VRG4	P40107	337 aa		4.33	□□□□□ -1.72
APA1	YCL050C	SAP185	P40856	1058 aa		4.33	□□□□□ -1.72
APA1	YCL050C	NUP53	Q03790	475 aa		4.33	□□□□□ -1.72
APA1	YCL050C	POS5	Q06892	414 aa		4.33	□□□□□ -1.72
APA1	YCL050C	BUD7	Q08754	746 aa		4.33	□□□□□ -1.72
APA1	YCL050C	PCD1	Q12524	340 aa		4.33	□□□□□ -1.72
APA1	YCL050C	SSM4	P40318	1319 aa		4.32	□□□□□ -1.72
APA1	YCL050C	RPL42A	P0CX27	106 aa	Known RBP	4.32	□□□□□ -1.72
APA1	YCL050C	RPL42B	P0CX28	106 aa	Known RBP	4.32	□□□□□ -1.72
APA1	YCL050C	CDC15	P27636	974 aa		4.32	□□□□□ -1.72
APA1	YCL050C	TEF4	P36008	412 aa	Known RBP	4.32	□□□□□ -1.72
APA1	YCL050C	GEX2	P36173	615 aa		4.32	□□□□□ -1.72
APA1	YCL050C	EAF7	P53911	425 aa	Known RBP	4.32	□□□□□ -1.72
APA1	YCL050C	IOC4	Q04213	475 aa		4.32	□□□□□ -1.72
APA1	YCL050C	SRL1	Q08673	210 aa		4.32	□□□□□ -1.72
APA1	YCL050C	YLR112W	Q12130	139 aa		4.32	□□□□□ -1.72
APA1	YCL050C	YPT1	P01123	206 aa	Known RBP	4.31	□□□□□ -1.72
APA1	YCL050C	CNS1	P33313	385 aa		4.31	□□□□□ -1.72
APA1	YCL050C	NTR2	P36118	322 aa	Predicted RBP	4.31	□□□□□ -1.72
APA1	YCL050C	AAP1	P37898	856 aa	Known RBP	4.31	□□□□□ -1.72
APA1	YCL050C	PFK26	P40433	827 aa	Known RBP	4.31	□□□□□ -1.72
APA1	YCL050C	IZH1	Q03419	316 aa		4.31	□□□□□ -1.72
APA1	YCL050C	VMS1	Q04311	632 aa	Known RBP	4.31	□□□□□ -1.72
APA1	YCL050C	TDA9	Q04545	1251 aa		4.31	□□□□□ -1.72
APA1	YCL050C	YMR034C	Q05131	434 aa	Predicted RBP	4.31	□□□□□ -1.72
APA1	YCL050C	MLH2	Q07980	695 aa		4.31	□□□□□ -1.72
APA1	YCL050C	SRP54	P20424	541 aa	Known RBP	4.3	□□□□□ -1.72
APA1	YCL050C	SRB5	P32585	307 aa		4.3	□□□□□ -1.72
APA1	YCL050C	SEC31	P38968	1273 aa	Known RBP	4.3	□□□□□ -1.72
APA1	YCL050C	YIL152W	P40455	235 aa		4.3	□□□□□ -1.72
APA1	YCL050C	CTF18	P49956	741 aa		4.3	□□□□□ -1.72
APA1	YCL050C	ATG16	Q03818	150 aa		4.3	□□□□□ -1.72
APA1	YCL050C	CAC2	Q04199	468 aa		4.3	□□□□□ -1.72
APA1	YCL050C	YLR302C	O13544	120 aa		4.29	□□□□□ -1.72
APA1	YCL050C	PET111	P08468	800 aa		4.29	□□□□□ -1.72
APA1	YCL050C	RAP1	P11938	827 aa		4.29	□□□□□ -1.72
APA1	YCL050C	PSY4	P38193	441 aa		4.29	□□□□□ -1.72
APA1	YCL050C	ARC40	P38328	384 aa	Known RBP	4.29	□□□□□ -1.72
APA1	YCL050C	RIC1	P40395	1056 aa		4.29	□□□□□ -1.72
APA1	YCL050C	SWP82	P43554	623 aa		4.29	□□□□□ -1.72
APA1	YCL050C	CTK2	P46962	323 aa		4.29	□□□□□ -1.72
APA1	YCL050C	PSP1	P50896	841 aa	Known RBP	4.29	□□□□□ -1.72
APA1	YCL050C	REG1	Q00816	1014 aa		4.29	□□□□□ -1.72
APA1	YCL050C	RSM28	Q03430	361 aa		4.29	□□□□□ -1.72
APA1	YCL050C	ECI1	Q05871	280 aa		4.29	□□□□□ -1.72
APA1	YCL050C	TKL1	P23254	680 aa	Known RBP	4.28	□□□□□ -1.72
APA1	YCL050C	ECM10	P39987	644 aa		4.28	□□□□□ -1.72
APA1	YCL050C	YIL169C	P40442	995 aa		4.28	□□□□□ -1.72
APA1	YCL050C	STB2	P46679	850 aa		4.28	□□□□□ -1.72
APA1	YCL050C	YNL234W	P53857	426 aa		4.28	□□□□□ -1.72
APA1	YCL050C	UTP21	Q06078	939 aa	Predicted RBP	4.28	□□□□□ -1.72
APA1	YCL050C	MCP2	Q06567	569 aa		4.28	□□□□□ -1.72
APA1	YCL050C	PSR2	Q07949	397 aa		4.28	□□□□□ -1.72
APA1	YCL050C	CBP1	P07252	654 aa		4.27	□□□□□ -1.73
APA1	YCL050C	CHO1	P08456	276 aa		4.27	□□□□□ -1.73
APA1	YCL050C	STE50	P25344	346 aa		4.27	□□□□□ -1.73
APA1	YCL050C	YCR043C	P25361	127 aa		4.27	□□□□□ -1.73
APA1	YCL050C	SAC1	P32368	623 aa	Known RBP	4.27	□□□□□ -1.73
APA1	YCL050C	MNN2	P38069	597 aa		4.27	□□□□□ -1.73
APA1	YCL050C	MET30	P39014	640 aa		4.27	□□□□□ -1.73
APA1	YCL050C	PCL6	P40038	420 aa		4.27	□□□□□ -1.73
APA1	YCL050C	MEP2	P41948	499 aa		4.27	□□□□□ -1.73
APA1	YCL050C	GTR1	Q00582	310 aa		4.27	□□□□□ -1.73
APA1	YCL050C	NUS1	Q12063	375 aa		4.27	□□□□□ -1.73
APA1	YCL050C	ERG8	P24521	451 aa		4.26	□□□□□ -1.73
APA1	YCL050C	YUR1	P26725	428 aa		4.26	□□□□□ -1.73
APA1	YCL050C	ESL2	P36168	1195 aa		4.26	□□□□□ -1.73
APA1	YCL050C	STV1	P37296	890 aa		4.26	□□□□□ -1.73
APA1	YCL050C	TES1	P41903	349 aa	Known RBP	4.26	□□□□□ -1.73
APA1	YCL050C	RTS3	P53289	263 aa		4.26	□□□□□ -1.73
APA1	YCL050C	ASI1	P54074	624 aa		4.26	□□□□□ -1.73
APA1	YCL050C	DIG1	Q03063	452 aa	Known RBP	4.26	□□□□□ -1.73
APA1	YCL050C	VCX1	Q99385	411 aa		4.26	□□□□□ -1.73
APA1	YCL050C	HXK2	P04807	486 aa	Known RBP	4.25	□□□□□ -1.73
APA1	YCL050C	SNF1	P06782	633 aa	Known RBP	4.25	□□□□□ -1.73
APA1	YCL050C	SLC1	P33333	303 aa		4.25	□□□□□ -1.73
APA1	YCL050C	RFC1	P38630	861 aa	Known RBP	4.25	□□□□□ -1.73
APA1	YCL050C	SAD1	P43589	448 aa		4.25	□□□□□ -1.73
APA1	YCL050C	YFR020W	P43600	232 aa		4.25	□□□□□ -1.73
APA1	YCL050C	IML2	P47031	731 aa		4.25	□□□□□ -1.73
APA1	YCL050C	RRT6	P53117	311 aa	Predicted RBP	4.25	□□□□□ -1.73
APA1	YCL050C	SGF73	P53165	657 aa		4.25	□□□□□ -1.73
APA1	YCL050C	YGR021W	P53212	290 aa		4.25	□□□□□ -1.73
APA1	YCL050C	NNF2	P53253	936 aa		4.25	□□□□□ -1.73
APA1	YCL050C	IST1	P53843	298 aa	Predicted RBP	4.25	□□□□□ -1.73
APA1	YCL050C	YNL181W	P53878	407 aa		4.25	□□□□□ -1.73
APA1	YCL050C	ARP10	Q04549	284 aa		4.25	□□□□□ -1.73
APA1	YCL050C	YLR281C	Q05863	155 aa		4.25	□□□□□ -1.73
APA1	YCL050C	VID22	Q05934	901 aa		4.25	□□□□□ -1.73
APA1	YCL050C	TFC6	Q06339	672 aa		4.25	□□□□□ -1.73
APA1	YCL050C	GRS2	Q06817	618 aa		4.25	□□□□□ -1.73
APA1	YCL050C	TRM8	Q12009	286 aa		4.25	□□□□□ -1.73
APA1	YCL050C	YOR019W	Q99248	730 aa		4.25	□□□□□ -1.73
APA1	YCL050C	GCS1	P35197	352 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms