RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W PFA4Q12006 378 aa2.15□□□□□ -2.06
SNF5YBR289W NDJ1Q12366 352 aa2.15□□□□□ -2.06
SNF5YBR289W SSM4P40318 1319 aa2.15□□□□□ -2.06
SNF5YBR289W CDC43P18898 376 aa2.15□□□□□ -2.07
SNF5YBR289W RPS2P25443 254 aaKnown RBP2.15□□□□□ -2.07
SNF5YBR289W CHS3P29465 1165 aa2.15□□□□□ -2.07
SNF5YBR289W PXL1P36166 706 aa2.15□□□□□ -2.07
SNF5YBR289W YBR225WP38321 900 aa2.15□□□□□ -2.07
SNF5YBR289W YEL068CP39977 110 aa2.15□□□□□ -2.07
SNF5YBR289W YMR147WP40218 223 aaKnown RBP2.15□□□□□ -2.07
SNF5YBR289W OPT1P40897 799 aa2.15□□□□□ -2.07
SNF5YBR289W IME4P41833 600 aa2.15□□□□□ -2.07
SNF5YBR289W MRX6P48564 524 aa2.15□□□□□ -2.07
SNF5YBR289W YRB30P53107 440 aaPredicted RBP2.15□□□□□ -2.07
SNF5YBR289W KTR5P53966 522 aaPredicted RBP2.15□□□□□ -2.07
SNF5YBR289W COG4Q06096 861 aa2.15□□□□□ -2.07
SNF5YBR289W CRN1Q06440 651 aa2.15□□□□□ -2.07
SNF5YBR289W FRE3Q08905 711 aa2.15□□□□□ -2.07
SNF5YBR289W CTT1P06115 562 aa2.14□□□□□ -2.07
SNF5YBR289W PWP1P21304 576 aaKnown RBP2.14□□□□□ -2.07
SNF5YBR289W CLB2P24869 491 aa2.14□□□□□ -2.07
SNF5YBR289W DMC1P25453 334 aa2.14□□□□□ -2.07
SNF5YBR289W PGS1P25578 521 aa2.14□□□□□ -2.07
SNF5YBR289W ECM10P39987 644 aa2.14□□□□□ -2.07
SNF5YBR289W IST3P40565 148 aaPredicted RBP2.14□□□□□ -2.07
SNF5YBR289W VMA13P41807 478 aaKnown RBP2.14□□□□□ -2.07
SNF5YBR289W YTP1P53584 459 aa2.14□□□□□ -2.07
SNF5YBR289W RSM28Q03430 361 aa2.14□□□□□ -2.07
SNF5YBR289W BSP1Q06604 576 aa2.14□□□□□ -2.07
SNF5YBR289W TUB1P09733 447 aaKnown RBP2.14□□□□□ -2.07
SNF5YBR289W MRPL9P31334 269 aa2.14□□□□□ -2.07
SNF5YBR289W TIF3P34167 436 aaKnown RBP2.14□□□□□ -2.07
SNF5YBR289W KEL1P38853 1164 aaKnown RBP2.14□□□□□ -2.07
SNF5YBR289W JHD1P40034 492 aa2.14□□□□□ -2.07
SNF5YBR289W DJP1P40564 432 aa2.14□□□□□ -2.07
SNF5YBR289W IRC6P43615 237 aa2.14□□□□□ -2.07
SNF5YBR289W IML2P47031 731 aa2.14□□□□□ -2.07
SNF5YBR289W DUO1P53168 247 aaKnown RBP2.14□□□□□ -2.07
SNF5YBR289W COG2P53271 262 aa2.14□□□□□ -2.07
SNF5YBR289W VMS1Q04311 632 aaKnown RBP2.14□□□□□ -2.07
SNF5YBR289W APN1P22936 367 aa2.13□□□□□ -2.07
SNF5YBR289W SLC1P33333 303 aa2.13□□□□□ -2.07
SNF5YBR289W NDE1P40215 560 aa2.13□□□□□ -2.07
SNF5YBR289W YJR061WP40355 935 aa2.13□□□□□ -2.07
SNF5YBR289W PFK26P40433 827 aaKnown RBP2.13□□□□□ -2.07
SNF5YBR289W ARC1P46672 376 aaKnown RBP2.13□□□□□ -2.07
SNF5YBR289W STU2P46675 888 aa2.13□□□□□ -2.07
SNF5YBR289W CTK2P46962 323 aa2.13□□□□□ -2.07
SNF5YBR289W ASE1P50275 885 aa2.13□□□□□ -2.07
SNF5YBR289W CAC2Q04199 468 aa2.13□□□□□ -2.07
SNF5YBR289W YDR109CQ04585 715 aa2.13□□□□□ -2.07
SNF5YBR289W TPK1P06244 397 aa2.13□□□□□ -2.07
SNF5YBR289W YFL068WP0CX99 160 aa2.13□□□□□ -2.07
SNF5YBR289W YLL066W-AP0CY00 160 aa2.13□□□□□ -2.07
SNF5YBR289W YLL067W-AP0CY01 160 aa2.13□□□□□ -2.07
SNF5YBR289W TKL1P23254 680 aaKnown RBP2.13□□□□□ -2.07
SNF5YBR289W NFU1P32860 256 aa2.13□□□□□ -2.07
SNF5YBR289W RPC34P32910 317 aa2.13□□□□□ -2.07
SNF5YBR289W PPZ2P33329 710 aa2.13□□□□□ -2.07
SNF5YBR289W SNU114P36048 1008 aaKnown RBP2.13□□□□□ -2.07
SNF5YBR289W ADE17P38009 592 aaKnown RBP2.13□□□□□ -2.07
SNF5YBR289W MTG2P38860 518 aa2.13□□□□□ -2.07
SNF5YBR289W KAP123P40069 1113 aaKnown RBP2.13□□□□□ -2.07
SNF5YBR289W FAF1P40546 346 aaPredicted RBP2.13□□□□□ -2.07
SNF5YBR289W BPL1P48445 690 aaPredicted RBP2.13□□□□□ -2.07
SNF5YBR289W APT1P49435 187 aaKnown RBP2.13□□□□□ -2.07
SNF5YBR289W TAP42Q04372 366 aa2.13□□□□□ -2.07
SNF5YBR289W COQ11Q05892 277 aa2.13□□□□□ -2.07
SNF5YBR289W PEX2P32800 271 aa2.12□□□□□ -2.07
SNF5YBR289W RPF2P36160 344 aaKnown RBP2.12□□□□□ -2.07
SNF5YBR289W BNA3P47039 444 aaKnown RBP2.12□□□□□ -2.07
SNF5YBR289W LYS20P48570 428 aaKnown RBP2.12□□□□□ -2.07
SNF5YBR289W PYK2P52489 506 aaKnown RBP2.12□□□□□ -2.07
SNF5YBR289W DSD1P53095 428 aa2.12□□□□□ -2.07
SNF5YBR289W HOS2P53096 452 aaPredicted RBP2.12□□□□□ -2.07
SNF5YBR289W VPS75P53853 264 aa2.12□□□□□ -2.07
SNF5YBR289W APM1Q00776 475 aaPredicted RBP2.12□□□□□ -2.07
SNF5YBR289W FMP30Q02883 468 aa2.12□□□□□ -2.07
SNF5YBR289W TDA9Q04545 1251 aa2.12□□□□□ -2.07
SNF5YBR289W GRX6Q12438 231 aa2.12□□□□□ -2.07
SNF5YBR289W SGF29P25554 259 aa2.12□□□□□ -2.07
SNF5YBR289W OCT1P35999 772 aa2.12□□□□□ -2.07
SNF5YBR289W ARN1P38731 627 aa2.12□□□□□ -2.07
SNF5YBR289W SEC31P38968 1273 aaKnown RBP2.12□□□□□ -2.07
SNF5YBR289W YER130CP39959 443 aa2.12□□□□□ -2.07
SNF5YBR289W LSM5P40089 93 aaKnown RBP2.12□□□□□ -2.07
SNF5YBR289W LAS21P40367 830 aa2.12□□□□□ -2.07
SNF5YBR289W LCL3P53153 274 aa2.12□□□□□ -2.07
SNF5YBR289W SNU56Q03782 492 aaKnown RBP2.12□□□□□ -2.07
SNF5YBR289W NUP1P20676 1076 aa2.11□□□□□ -2.07
SNF5YBR289W ERG3P32353 365 aa2.11□□□□□ -2.07
SNF5YBR289W PDB1P32473 366 aaKnown RBP2.11□□□□□ -2.07
SNF5YBR289W CIR1P42940 261 aa2.11□□□□□ -2.07
SNF5YBR289W BSC5P53755 489 aa2.11□□□□□ -2.07
SNF5YBR289W THI7Q05998 598 aa2.11□□□□□ -2.07
SNF5YBR289W UTP21Q06078 939 aaPredicted RBP2.11□□□□□ -2.07
SNF5YBR289W YOL159C-AQ3E769 90 aa2.11□□□□□ -2.07
SNF5YBR289W SPO16P17122 198 aa2.11□□□□□ -2.07
SNF5YBR289W CNA1P23287 553 aa2.11□□□□□ -2.07
SNF5YBR289W TEF4P36008 412 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 200 ms