RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W KTR4P38131 464 aa5.23□□□□□ -1.57
PRE7YBL041W HSL7P38274 827 aa5.23□□□□□ -1.57
PRE7YBL041W LYS9P38999 446 aa5.23□□□□□ -1.57
PRE7YBL041W TMA108P40462 946 aa5.23□□□□□ -1.57
PRE7YBL041W NUP84P52891 726 aa5.23□□□□□ -1.57
PRE7YBL041W FLC3P53121 802 aa5.23□□□□□ -1.57
PRE7YBL041W PEX31P53203 462 aa5.23□□□□□ -1.57
PRE7YBL041W UME1Q03010 460 aa5.23□□□□□ -1.57
PRE7YBL041W YMR206WQ03695 313 aa5.23□□□□□ -1.57
PRE7YBL041W YDR222WQ04925 415 aa5.23□□□□□ -1.57
PRE7YBL041W YLR287CQ05881 355 aa5.23□□□□□ -1.57
PRE7YBL041W ENB1Q08299 606 aa5.23□□□□□ -1.57
PRE7YBL041W CLP1Q08685 445 aaPredicted RBP5.23□□□□□ -1.57
PRE7YBL041W VPS5Q92331 675 aa5.23□□□□□ -1.57
PRE7YBL041W POL2P21951 2222 aaKnown RBP5.23□□□□□ -1.57
PRE7YBL041W MSF1P08425 469 aa5.22□□□□□ -1.57
PRE7YBL041W YPK1P12688 680 aaKnown RBP5.22□□□□□ -1.57
PRE7YBL041W IME2P32581 645 aa5.22□□□□□ -1.57
PRE7YBL041W SEC6P32844 805 aa5.22□□□□□ -1.57
PRE7YBL041W OAR1P35731 278 aa5.22□□□□□ -1.57
PRE7YBL041W JNM1P36224 373 aa5.22□□□□□ -1.57
PRE7YBL041W MRPL10P36520 322 aa5.22□□□□□ -1.57
PRE7YBL041W RKM3P38222 552 aa5.22□□□□□ -1.57
PRE7YBL041W CRP1P38845 465 aaKnown RBP5.22□□□□□ -1.57
PRE7YBL041W SMC2P38989 1170 aaKnown RBP5.22□□□□□ -1.57
PRE7YBL041W PCF11P39081 626 aaPredicted RBP5.22□□□□□ -1.57
PRE7YBL041W GDH3P39708 457 aa5.22□□□□□ -1.57
PRE7YBL041W EXO1P39875 702 aa5.22□□□□□ -1.57
PRE7YBL041W YER189WP40104 122 aa5.22□□□□□ -1.57
PRE7YBL041W UBP7P40453 1071 aa5.22□□□□□ -1.57
PRE7YBL041W PRP24P49960 444 aaKnown RBP5.22□□□□□ -1.57
PRE7YBL041W PYK2P52489 506 aaKnown RBP5.22□□□□□ -1.57
PRE7YBL041W YGR111WP53265 400 aa5.22□□□□□ -1.57
PRE7YBL041W TDA7P53882 636 aaPredicted RBP5.22□□□□□ -1.57
PRE7YBL041W KTR6P54070 446 aa5.22□□□□□ -1.57
PRE7YBL041W SXM1Q04175 944 aaKnown RBP5.22□□□□□ -1.57
PRE7YBL041W JIP5Q06214 492 aaPredicted RBP5.22□□□□□ -1.57
PRE7YBL041W YSH1Q06224 779 aaPredicted RBP5.22□□□□□ -1.57
PRE7YBL041W YDL073WQ07454 984 aa5.22□□□□□ -1.57
PRE7YBL041W AAD4Q07747 329 aa5.22□□□□□ -1.57
PRE7YBL041W NDD1Q08887 554 aa5.22□□□□□ -1.57
PRE7YBL041W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
PRE7YBL041W PAB1P04147 577 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58 RIP-Chip
PRE7YBL041W KAR3P17119 729 aa5.21□□□□□ -1.58
PRE7YBL041W STE13P33894 931 aa5.21□□□□□ -1.58
PRE7YBL041W YKL050CP35736 922 aa5.21□□□□□ -1.58
PRE7YBL041W TCD2P36101 447 aaKnown RBP5.21□□□□□ -1.58
PRE7YBL041W PRM9P39551 298 aa5.21□□□□□ -1.58
PRE7YBL041W VAC8P39968 578 aa5.21□□□□□ -1.58
PRE7YBL041W SAP185P40856 1058 aa5.21□□□□□ -1.58
PRE7YBL041W BST1P43571 1029 aa5.21□□□□□ -1.58
PRE7YBL041W VEL1P53058 206 aa5.21□□□□□ -1.58
PRE7YBL041W YGR283CP53336 341 aaPredicted RBP5.21□□□□□ -1.58
PRE7YBL041W TRM112P53738 135 aaPredicted RBP5.21□□□□□ -1.58
PRE7YBL041W VPS75P53853 264 aa5.21□□□□□ -1.58
PRE7YBL041W YLR012CQ07927 99 aa5.21□□□□□ -1.58
PRE7YBL041W RRP6Q12149 733 aaKnown RBP5.21□□□□□ -1.58
PRE7YBL041W UPC2Q12151 913 aa5.21□□□□□ -1.58
PRE7YBL041W HIS1P00498 297 aaKnown RBP5.2□□□□□ -1.58
PRE7YBL041W PYC1P11154 1178 aaKnown RBP5.2□□□□□ -1.58
PRE7YBL041W MET16P18408 261 aaPredicted RBP5.2□□□□□ -1.58
PRE7YBL041W ARF2P19146 181 aaKnown RBP5.2□□□□□ -1.58
PRE7YBL041W ROX1P25042 368 aa5.2□□□□□ -1.58
PRE7YBL041W TYE7P33122 291 aaPredicted RBP5.2□□□□□ -1.58
PRE7YBL041W FUI1P38196 639 aa5.2□□□□□ -1.58
PRE7YBL041W SWC5P38326 303 aa5.2□□□□□ -1.58
PRE7YBL041W URA8P38627 578 aaPredicted RBP5.2□□□□□ -1.58
PRE7YBL041W FSH1P38777 243 aaKnown RBP5.2□□□□□ -1.58
PRE7YBL041W RTT107P38850 1070 aa5.2□□□□□ -1.58
PRE7YBL041W TAN1P53072 289 aaPredicted RBP5.2□□□□□ -1.58
PRE7YBL041W SLU7Q02775 382 aaKnown RBP5.2□□□□□ -1.58
PRE7YBL041W SND1Q04007 877 aa5.2□□□□□ -1.58
PRE7YBL041W NEW1Q08972 1196 aaKnown RBP5.2□□□□□ -1.58
PRE7YBL041W ADE3P07245 946 aaKnown RBP5.19□□□□□ -1.58
PRE7YBL041W GFA1P14742 717 aaKnown RBP5.19□□□□□ -1.58
PRE7YBL041W SPO12P17123 173 aa5.19□□□□□ -1.58
PRE7YBL041W SBA1P28707 216 aaKnown RBP5.19□□□□□ -1.58
PRE7YBL041W STE14P32584 239 aa5.19□□□□□ -1.58
PRE7YBL041W YKL069WP36088 180 aa5.19□□□□□ -1.58
PRE7YBL041W MRPL40P36534 297 aa5.19□□□□□ -1.58
PRE7YBL041W KAP104P38217 918 aaKnown RBP5.19□□□□□ -1.58
PRE7YBL041W TSL1P38427 1098 aaKnown RBP5.19□□□□□ -1.58
PRE7YBL041W EDC3P39998 551 aaKnown RBP5.19□□□□□ -1.58
PRE7YBL041W TMN3P40071 706 aa5.19□□□□□ -1.58
PRE7YBL041W YER158CP40095 573 aa5.19□□□□□ -1.58
PRE7YBL041W YJR061WP40355 935 aa5.19□□□□□ -1.58
PRE7YBL041W YIL054WP40524 105 aa5.19□□□□□ -1.58
PRE7YBL041W SNG1P46950 547 aa5.19□□□□□ -1.58
PRE7YBL041W YGR021WP53212 290 aa5.19□□□□□ -1.58
PRE7YBL041W YNL247WP53852 767 aaKnown RBP5.19□□□□□ -1.58
PRE7YBL041W ELP3Q02908 557 aaKnown RBP5.19□□□□□ -1.58
PRE7YBL041W RPN4Q03465 531 aa5.19□□□□□ -1.58
PRE7YBL041W ARA2Q04212 335 aa5.19□□□□□ -1.58
PRE7YBL041W GYL1Q04322 720 aa5.19□□□□□ -1.58
PRE7YBL041W GRX8Q05926 109 aa5.19□□□□□ -1.58
PRE7YBL041W OPY2Q06810 360 aa5.19□□□□□ -1.58
PRE7YBL041W THI21Q08975 551 aa5.19□□□□□ -1.58
PRE7YBL041W TRM13Q12383 476 aa5.19□□□□□ -1.58
PRE7YBL041W MIS1P09440 975 aaKnown RBP5.18□□□□□ -1.58
PRE7YBL041W DAL81P21657 970 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms