RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FOXP2O15409 715 aa14.28□□□□□ -0.12
SHKBP1-213ENST00000597325 HMGCRP04035 888 aa14.28□□□□□ -0.12
SHKBP1-213ENST00000597325 HSPA4P34932 840 aa14.28□□□□□ -0.12
SHKBP1-213ENST00000597325 TRIM32Q13049 653 aa14.28□□□□□ -0.12
SHKBP1-213ENST00000597325 MAPKAPK5Q8IW41 473 aa14.28□□□□□ -0.12
SHKBP1-213ENST00000597325 TBC1D32Q96NH3 1257 aa14.28□□□□□ -0.12
SHKBP1-213ENST00000597325 HMX1Q9NP08 348 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-213ENST00000597325 DCP1AQ9NPI6 582 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-213ENST00000597325 CHD7Q9P2D1 2997 aa14.28□□□□□ -0.12
SHKBP1-213ENST00000597325 LTBP2Q14767 1821 aa14.27□□□□□ -0.12
SHKBP1-213ENST00000597325 FGAP02671 866 aa14.27□□□□□ -0.13
SHKBP1-213ENST00000597325 RBM25P49756 843 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-213ENST00000597325 SMAD3P84022 425 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-213ENST00000597325 CREB3L3Q68CJ9 461 aa14.27□□□□□ -0.13
SHKBP1-213ENST00000597325 MCM9Q9NXL9 1143 aa14.27□□□□□ -0.13
SHKBP1-213ENST00000597325 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.13
SHKBP1-213ENST00000597325 ZNF213O14771 459 aa14.26□□□□□ -0.13
SHKBP1-213ENST00000597325 SLC27A2O14975 620 aa14.26□□□□□ -0.13
SHKBP1-213ENST00000597325 POLR3DP05423 398 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-213ENST00000597325 SLC3A2P08195 630 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-213ENST00000597325 CACNB3P54284 484 aa14.26□□□□□ -0.13
SHKBP1-213ENST00000597325 ANAPC15P60006 121 aa14.26□□□□□ -0.13
SHKBP1-213ENST00000597325 NECTIN1Q15223 517 aa14.26□□□□□ -0.13
SHKBP1-213ENST00000597325 FAM83AQ86UY5 434 aa14.26□□□□□ -0.13
SHKBP1-213ENST00000597325 IDI2Q9BXS1 227 aa14.26□□□□□ -0.13
SHKBP1-213ENST00000597325 ZNF112Q9UJU3 913 aa14.26□□□□□ -0.13
SHKBP1-213ENST00000597325 MINDY4BA8MYZ0 360 aa14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 NPM3O75607 178 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 HLA-DOAP06340 250 aa14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 HAND2P61296 217 aa14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 PPARAQ07869 468 aa14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 KRT32Q14532 448 aa14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 SHHQ15465 462 aa14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 MAP3K21Q5TCX8 1036 aa14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 ADAMTS19Q8TE59 1207 aa14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 ATXN2LQ8WWM7 1075 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 COA7Q96BR5 231 aa14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 OSBPL5Q9H0X9 879 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 SAP30BPQ9UHR5 308 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 BAZ2AQ9UIF9 1905 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-213ENST00000597325 MYH1P12882 1939 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 USP17L12C9JPN9 530 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 USP17L21D6R901 530 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 CXCL11O14625 94 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 ENTPD3O75355 529 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 CYP21A2P08686 494 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 TCP10Q12799 353 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 NFIAQ12857 509 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 SBK1Q52WX2 424 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 C9orf50Q5SZB4 431 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 FKBP1CQ5VVH2 108 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 DCAF15Q66K64 600 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 CTR9Q6PD62 1173 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 MIGA2Q7L4E1 593 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 HOOK2Q96ED9 719 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 LBHD1Q9BQE6 289 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 ZNF341Q9BYN7 854 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 DDX4Q9NQI0 724 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 GJD2Q9UKL4 321 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 PALD1Q9ULE6 856 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 SLC45A1Q9Y2W3 748 aa14.24□□□□□ -0.13
SHKBP1-213ENST00000597325 PLXNB2O15031 1838 aa14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 A0A0G2JLL6 359 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 NOL9Q5SY16 702 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 PRRT2Q7Z6L0 340 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 TTC6Q86TZ1 520 aa14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 KCNB2Q92953 911 aa14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 ASB2Q96Q27 587 aa14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 UHRF1Q96T88 793 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 C1QTNF1Q9BXJ1 281 aa14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 DHX36Q9H2U1 1008 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 RNF41Q9H4P4 317 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 FAM198AQ9UFP1 575 aa14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 SNX14Q9Y5W7 946 aa14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 MUC6Q6W4X9 2439 aa14.23□□□□□ -0.13
SHKBP1-213ENST00000597325 ROBO3Q96MS0 1386 aa14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 PTPRFP10586 1907 aa14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 CYP2D7A0A087X1C5 515 aa14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 PSMA5P28066 241 aa14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 TRDNQ13061 729 aa14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 C12orf60Q5U649 245 aa14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 RALYLQ86SE5 291 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 JAKMIP1Q96N16 626 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 TRIM34Q9BYJ4 488 aa14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 ZNF287Q9HBT7 754 aa14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 ANAPC4Q9UJX5 808 aa14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 USP34Q70CQ2 3546 aa14.22□□□□□ -0.13
SHKBP1-213ENST00000597325 CYP2D6P10635 497 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 PCP11498 1178 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 CTDSPL2Q05D32 466 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 PDE4BQ07343 736 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 GRIN2CQ14957 1233 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 TSGA10IPQ3SY00 556 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 AKNAD1Q5T1N1 836 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 LHX8Q68G74 356 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 MFSD6Q6ZSS7 791 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 TBC1D10CQ8IV04 446 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 RASEFQ8IZ41 740 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 CRACR2BQ8N4Y2 399 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms