RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 PDE6AP16499 860 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 DSG3P32926 999 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 MSL3Q8N5Y2 521 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 DEFB123Q8N688 67 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 RHPN1Q8TCX5 695 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 SPATC1LQ9H0A9 340 aa13.59□□□□□ -0.23
SMARCE1-214ENST00000578112 TMEM265A0A087WTH1 108 aa13.58□□□□□ -0.24
SMARCE1-214ENST00000578112 KBTBD13C9JR72 458 aa13.58□□□□□ -0.24
SMARCE1-214ENST00000578112 SEPT4O43236 478 aa13.58□□□□□ -0.24
SMARCE1-214ENST00000578112 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMARCE1-214ENST00000578112 TMX2Q9Y320 296 aa13.58□□□□□ -0.24
SMARCE1-214ENST00000578112 DLL1O00548 723 aa13.58□□□□□ -0.24
SMARCE1-214ENST00000578112 ACER1Q8TDN7 264 aa13.58□□□□□ -0.24
SMARCE1-214ENST00000578112 MOV10L1Q9BXT6 1211 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-214ENST00000578112 TCRBV5S4A2TA0A5A2 114 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 SHROOM1Q2M3G4 852 aaPredicted RBP13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 ZSCAN25Q6NSZ9 544 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 DPP9Q86TI2 863 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 NPLOC4Q8TAT6 608 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 VCPKMTQ9H867 229 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 DCP1AQ9NPI6 582 aaPredicted RBP13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 FLRT1Q9NZU1 646 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 SYNPO2Q9UMS6 1093 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 ADAMTS5Q9UNA0 930 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 SYN1P17600 705 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 PLCD1P51178 756 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 SEPT2Q15019 361 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 SLC9C2Q5TAH2 1124 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 DDRGK1Q96HY6 314 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 MCM9Q9NXL9 1143 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 MYH7P12883 1935 aa13.57□□□□□ -0.24
SMARCE1-214ENST00000578112 ADORA2AP29274 412 aa13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 RTP1P59025 263 aa13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 UBE3CQ15386 1083 aa13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 ANTXR1Q9H6X2 564 aa13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 DDX19BQ9UMR2 479 aa13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 ZBED9Q6R2W3 1325 aa13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 TRIOBPQ9H2D6 2365 aa13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 POTEB2H3BUK9 544 aa13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 IFIT2P09913 472 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 SENP6Q9GZR1 1112 aaPredicted RBP13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 C1orf115Q9H7X2 142 aa13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 ZNF532Q9HCE3 1301 aa13.56□□□□□ -0.24
SMARCE1-214ENST00000578112 GREB1LQ9C091 1923 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-214ENST00000578112 ATP5JP18859 108 aa13.55□□□□□ -0.24
SMARCE1-214ENST00000578112 ADD2P35612 726 aa13.55□□□□□ -0.24
SMARCE1-214ENST00000578112 ZYXQ15942 572 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-214ENST00000578112 WDR78Q5VTH9 848 aa13.55□□□□□ -0.24
SMARCE1-214ENST00000578112 SLC39A5Q6ZMH5 540 aa13.55□□□□□ -0.24
SMARCE1-214ENST00000578112 RIOX2Q8IUF8 465 aa13.55□□□□□ -0.24
SMARCE1-214ENST00000578112 PHF24Q9UPV7 400 aa13.55□□□□□ -0.24
SMARCE1-214ENST00000578112 RLBP1P12271 317 aa13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 ERCC3P19447 782 aa13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 SMAD3P84022 425 aaKnown RBP13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 C16orf86Q6ZW13 317 aa13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 TRPV1Q8NER1 839 aa13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 TSEN34Q9BSV6 310 aaKnown RBP13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 KANSL2Q9H9L4 492 aa13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 GOPCQ9HD26 462 aa13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 FCER1AP12319 257 aa13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 ICA1Q05084 483 aa13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 GIMAP6Q6P9H5 292 aa13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 EXOC6BQ9Y2D4 811 aa13.54□□□□□ -0.24
SMARCE1-214ENST00000578112 A0A1W2PRG0 241 aa13.53□□□□□ -0.24
SMARCE1-214ENST00000578112 MPHOSPH10O00566 681 aaKnown RBP13.53□□□□□ -0.24
SMARCE1-214ENST00000578112 CNGA1P29973 690 aa13.53□□□□□ -0.24
SMARCE1-214ENST00000578112 C12orf60Q5U649 245 aa13.53□□□□□ -0.24
SMARCE1-214ENST00000578112 MAML3Q96JK9 1138 aa13.53□□□□□ -0.24
SMARCE1-214ENST00000578112 HAUS7Q99871 368 aa13.53□□□□□ -0.24
SMARCE1-214ENST00000578112 ARPP21Q9UBL0 812 aaPredicted RBP13.53□□□□□ -0.24
SMARCE1-214ENST00000578112 PEX10O60683 326 aa13.53□□□□□ -0.24
SMARCE1-214ENST00000578112 ZNF697Q5TEC3 545 aa13.53□□□□□ -0.24
SMARCE1-214ENST00000578112 PAG1Q9NWQ8 432 aa13.53□□□□□ -0.24
SMARCE1-214ENST00000578112 CYP2C19P33261 490 aa13.52□□□□□ -0.24
SMARCE1-214ENST00000578112 SBK1Q52WX2 424 aa13.52□□□□□ -0.24
SMARCE1-214ENST00000578112 ZNF467Q7Z7K2 595 aaPredicted RBP13.52□□□□□ -0.24
SMARCE1-214ENST00000578112 LCORLQ8N3X6 602 aa13.52□□□□□ -0.24
SMARCE1-214ENST00000578112 FLOT1O75955 427 aa13.52□□□□□ -0.25
SMARCE1-214ENST00000578112 PLXNA1Q9UIW2 1896 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 SYNGAP1Q96PV0 1343 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 GOLIM4O00461 696 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 ATP2A1O14983 1001 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 COBLO75128 1261 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 FDX1P10109 184 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 CDK8P49336 464 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 RNF180Q86T96 592 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 TOX2Q96NM4 488 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 MMP19Q99542 508 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 SEZ6LQ9BYH1 1024 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 RARBP10826 455 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 MDM2Q00987 491 aaPredicted RBP13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 LRRC41Q15345 812 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 ZNF792Q3KQV3 632 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 NCAPG2Q86XI2 1143 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 ZNF287Q9HBT7 754 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 PPP1R9AQ9ULJ8 1098 aa13.51□□□□□ -0.25
SMARCE1-214ENST00000578112 KIAA0355O15063 1070 aa13.5□□□□□ -0.25
SMARCE1-214ENST00000578112 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms