RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 KIF28PB7ZC32 967 aa14.69□□□□□ -0.06
CACNB3-223ENST00000552480 MMP1P03956 469 aa14.69□□□□□ -0.06
CACNB3-223ENST00000552480 TNNI2P48788 182 aa14.69□□□□□ -0.06
CACNB3-223ENST00000552480 UBE2HP62256 183 aa14.69□□□□□ -0.06
CACNB3-223ENST00000552480 NBPF9Q3BBW0 867 aa14.69□□□□□ -0.06
CACNB3-223ENST00000552480 GPT2Q8TD30 523 aa14.69□□□□□ -0.06
CACNB3-223ENST00000552480 SYT17Q9BSW7 474 aa14.69□□□□□ -0.06
CACNB3-223ENST00000552480 V9GY48 417 aaPredicted RBP14.69□□□□□ -0.06
CACNB3-223ENST00000552480 TCHHQ07283 1943 aa14.68□□□□□ -0.06
CACNB3-223ENST00000552480 GADD45BO75293 160 aaPredicted RBP14.68□□□□□ -0.06
CACNB3-223ENST00000552480 PARP1P09874 1014 aaKnown RBP14.68□□□□□ -0.06
CACNB3-223ENST00000552480 SLURP2P0DP57 97 aa14.68□□□□□ -0.06
CACNB3-223ENST00000552480 U2AF2P26368 475 aaKnown RBP eCLIP14.68□□□□□ -0.06
CACNB3-223ENST00000552480 GNL2Q13823 731 aaKnown RBP14.68□□□□□ -0.06
CACNB3-223ENST00000552480 SAFBQ15424 915 aaKnown RBP eCLIP14.68□□□□□ -0.06
CACNB3-223ENST00000552480 TMEM179Q6ZVK1 233 aa14.68□□□□□ -0.06
CACNB3-223ENST00000552480 STAG2Q8N3U4 1231 aa14.68□□□□□ -0.06
CACNB3-223ENST00000552480 LEO1Q8WVC0 666 aaPredicted RBP14.68□□□□□ -0.06
CACNB3-223ENST00000552480 SPATA32Q96LK8 384 aa14.68□□□□□ -0.06
CACNB3-223ENST00000552480 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.68□□□□□ -0.06
CACNB3-223ENST00000552480 NYAP2Q9P242 653 aa14.68□□□□□ -0.06
CACNB3-223ENST00000552480 TFIP11Q9UBB9 837 aaKnown RBP14.68□□□□□ -0.06
CACNB3-223ENST00000552480 CLIP2Q9UDT6 1046 aa14.68□□□□□ -0.06
CACNB3-223ENST00000552480 CNOT7Q9UIV1 285 aaKnown RBP14.68□□□□□ -0.06
CACNB3-223ENST00000552480 TBC1D12O60347 775 aa14.67□□□□□ -0.06
CACNB3-223ENST00000552480 SNHG28P0DPA3 235 aa14.67□□□□□ -0.06
CACNB3-223ENST00000552480 SCG2P13521 617 aa14.67□□□□□ -0.06
CACNB3-223ENST00000552480 SMARCA1P28370 1054 aa14.67□□□□□ -0.06
CACNB3-223ENST00000552480 TNFAIP1Q13829 316 aa14.67□□□□□ -0.06
CACNB3-223ENST00000552480 PFKFB3Q16875 520 aaPredicted RBP14.67□□□□□ -0.06
CACNB3-223ENST00000552480 ABCB5Q2M3G0 1257 aa14.67□□□□□ -0.06
CACNB3-223ENST00000552480 ASPRV1Q53RT3 343 aa14.67□□□□□ -0.06
CACNB3-223ENST00000552480 MYSM1Q5VVJ2 828 aa14.67□□□□□ -0.06
CACNB3-223ENST00000552480 SPZ1Q9BXG8 430 aa14.67□□□□□ -0.06
CACNB3-223ENST00000552480 KANSL2Q9H9L4 492 aa14.67□□□□□ -0.06
CACNB3-223ENST00000552480 SBF1O95248 1867 aa14.67□□□□□ -0.06
CACNB3-223ENST00000552480 USP17L5A8MUK1 530 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 KLRF2D3W0D1 207 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 PDHBP11177 359 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 GSE1Q14687 1217 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 KIF4BQ2VIQ3 1234 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 RBM26Q5T8P6 1007 aaKnown RBP14.66□□□□□ -0.06
CACNB3-223ENST00000552480 CLEC10AQ8IUN9 316 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 GPC2Q8N158 579 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 LRRC47Q8N1G4 583 aaKnown RBP14.66□□□□□ -0.06
CACNB3-223ENST00000552480 MKL1Q969V6 931 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 PHF20Q9BVI0 1012 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 TMEM39BQ9GZU3 492 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 FOXP1Q9H334 677 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-223ENST00000552480 CABP5Q9NP86 173 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 RTEL1Q9NZ71 1219 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 PGAP2Q9UHJ9 254 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 KCNJ14Q9UNX9 436 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 MTMR7Q9Y216 660 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 MYH4Q9Y623 1939 aa14.66□□□□□ -0.06
CACNB3-223ENST00000552480 hCG_1642624A0A1W2PR95 340 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 H7C1D1 291 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 GDF11O95390 407 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 EGFRP00533 1210 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 ICA1Q05084 483 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 SEPT2Q15019 361 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 SLC35G1Q2M3R5 365 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 USP17L2Q6R6M4 530 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 DIS3L2Q8IYB7 885 aaKnown RBP14.65□□□□□ -0.06
CACNB3-223ENST00000552480 FAM177A1Q8N128 213 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-223ENST00000552480 USP28Q96RU2 1077 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 GZF1Q9H116 711 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-223ENST00000552480 SH3GLB2Q9NR46 395 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 POLR3EQ9NVU0 708 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 VPS54Q9P1Q0 977 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 RCOR1Q9UKL0 485 aa14.65□□□□□ -0.06
CACNB3-223ENST00000552480 GOLGA8HP0CJ92 632 aa14.64□□□□□ -0.07
CACNB3-223ENST00000552480 EEF2P13639 858 aaKnown RBP14.64□□□□□ -0.07
CACNB3-223ENST00000552480 KRT2P35908 639 aa14.64□□□□□ -0.07
CACNB3-223ENST00000552480 NASPP49321 788 aaPredicted RBP14.64□□□□□ -0.07
CACNB3-223ENST00000552480 ATP2B2Q01814 1243 aa14.64□□□□□ -0.07
CACNB3-223ENST00000552480 MAP3K10Q02779 954 aa14.64□□□□□ -0.07
CACNB3-223ENST00000552480 SHROOM1Q2M3G4 852 aaPredicted RBP14.64□□□□□ -0.07
CACNB3-223ENST00000552480 TBC1D10BQ4KMP7 808 aaPredicted RBP14.64□□□□□ -0.07
CACNB3-223ENST00000552480 CAVIN1Q6NZI2 390 aaKnown RBP14.64□□□□□ -0.07
CACNB3-223ENST00000552480 RASGRP2Q7LDG7 609 aa14.64□□□□□ -0.07
CACNB3-223ENST00000552480 SAMD7Q7Z3H4 446 aa14.64□□□□□ -0.07
CACNB3-223ENST00000552480 NOSTRINQ8IVI9 506 aa14.64□□□□□ -0.07
CACNB3-223ENST00000552480 SHISA4Q96DD7 197 aa14.64□□□□□ -0.07
CACNB3-223ENST00000552480 BRMS1Q9HCU9 246 aa14.64□□□□□ -0.07
CACNB3-223ENST00000552480 GPRC5DQ9NZD1 345 aa14.64□□□□□ -0.07
CACNB3-223ENST00000552480 SYNPO2Q9UMS6 1093 aa14.64□□□□□ -0.07
CACNB3-223ENST00000552480 BTBD18B2RXH4 712 aa14.63□□□□□ -0.07
CACNB3-223ENST00000552480 CYTH3O43739 400 aa14.63□□□□□ -0.07
CACNB3-223ENST00000552480 YEATS4O95619 227 aa14.63□□□□□ -0.07
CACNB3-223ENST00000552480 GH2P01242 217 aa14.63□□□□□ -0.07
CACNB3-223ENST00000552480 YBX3P16989 372 aaKnown RBP eCLIP14.63□□□□□ -0.07
CACNB3-223ENST00000552480 ZNF543Q08ER8 600 aa14.63□□□□□ -0.07
CACNB3-223ENST00000552480 RASA3Q14644 834 aa14.63□□□□□ -0.07
CACNB3-223ENST00000552480 RRP1BQ14684 758 aaKnown RBP14.63□□□□□ -0.07
CACNB3-223ENST00000552480 GPATCH4Q5T3I0 446 aaKnown RBP14.63□□□□□ -0.07
CACNB3-223ENST00000552480 DCAF4Q8WV16 495 aa14.63□□□□□ -0.07
CACNB3-223ENST00000552480 SYAP1Q96A49 352 aaPredicted RBP14.63□□□□□ -0.07
CACNB3-223ENST00000552480 FTOQ9C0B1 505 aaKnown RBP eCLIP14.63□□□□□ -0.07
CACNB3-223ENST00000552480 RIOX1Q9H6W3 641 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms