RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 KARSQ15046 597 aaKnown RBP18■□□□□ 0.47
SNRNP70-203ENST00000544278 TTC38Q5R3I4 469 aa18■□□□□ 0.47
SNRNP70-203ENST00000544278 HEATR3Q7Z4Q2 680 aa18■□□□□ 0.47
SNRNP70-203ENST00000544278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.99■□□□□ 0.47
SNRNP70-203ENST00000544278 ACTN4O43707 911 aaKnown RBP17.99■□□□□ 0.47
SNRNP70-203ENST00000544278 RCSD1Q6JBY9 416 aa17.99■□□□□ 0.47
SNRNP70-203ENST00000544278 TMTC2Q8N394 836 aa17.99■□□□□ 0.47
SNRNP70-203ENST00000544278 LDHBP07195 334 aaKnown RBP17.99■□□□□ 0.47
SNRNP70-203ENST00000544278 PHF20Q9BVI0 1012 aa17.99■□□□□ 0.47
SNRNP70-203ENST00000544278 RNF26Q9BY78 433 aaPredicted RBP17.99■□□□□ 0.47
SNRNP70-203ENST00000544278 CNTNAP5Q8WYK1 1306 aa17.99■□□□□ 0.47
SNRNP70-203ENST00000544278 STK36Q9NRP7 1315 aa17.99■□□□□ 0.47
SNRNP70-203ENST00000544278 PES1O00541 588 aaKnown RBP17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 IL17AQ16552 155 aa17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 SLC35G1Q2M3R5 365 aa17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 UBA5Q9GZZ9 404 aa17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 SRPRBQ9Y5M8 271 aaKnown RBP17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 CHD4Q14839 1912 aa17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 UFL1O94874 794 aa17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 PNMA1Q8ND90 353 aa17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 ZSWIM4Q9H7M6 989 aa17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 KAT14Q9H8E8 782 aa17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 FANCGO15287 622 aa17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 BARGINQ6ZT62 677 aa17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 CNBD1Q8NA66 436 aa17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 GTPBP4Q9BZE4 634 aaKnown RBP17.98■□□□□ 0.47
SNRNP70-203ENST00000544278 C6orf229H3BNL8 230 aa17.97■□□□□ 0.47
SNRNP70-203ENST00000544278 INF2Q27J81 1249 aa17.97■□□□□ 0.47
SNRNP70-203ENST00000544278 TRAPPC3LQ5T215 181 aa17.97■□□□□ 0.47
SNRNP70-203ENST00000544278 MEX3CQ5U5Q3 659 aaKnown RBP17.97■□□□□ 0.47
SNRNP70-203ENST00000544278 ECM29Q5VYK3 1845 aa17.97■□□□□ 0.47
SNRNP70-203ENST00000544278 RTL9Q8NET4 1388 aa17.97■□□□□ 0.47
SNRNP70-203ENST00000544278 XBP1P17861 261 aa17.97■□□□□ 0.47
SNRNP70-203ENST00000544278 GPSM2P81274 684 aa17.97■□□□□ 0.47
SNRNP70-203ENST00000544278 USP17L2Q6R6M4 530 aa17.97■□□□□ 0.47
SNRNP70-203ENST00000544278 BRIP1Q9BX63 1249 aa17.97■□□□□ 0.47
SNRNP70-203ENST00000544278 TFRCP02786 760 aaKnown RBP17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 TSPY3P0CV98 308 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 TSPY8P0CW00 308 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 CUL4BQ13620 913 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 CTNND2Q9UQB3 1225 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 PLCH1Q4KWH8 1693 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 SCG2P13521 617 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 ERCC6LQ2NKX8 1250 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 TOGARAM2Q6ZUX3 1019 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 NYAP1Q6ZVC0 841 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 PAGE5Q96GU1 130 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 TIGD1Q96MW7 591 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 OSBPL5Q9H0X9 879 aaPredicted RBP17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 GDAQ9Y2T3 454 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 PRPF3O43395 683 aaKnown RBP17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 KIF20AO95235 890 aa17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.96■□□□□ 0.47
SNRNP70-203ENST00000544278 TOM1O60784 492 aa17.95■□□□□ 0.46
SNRNP70-203ENST00000544278 ATP2B2Q01814 1243 aa17.95■□□□□ 0.46
SNRNP70-203ENST00000544278 TMEM60Q9H2L4 133 aa17.95■□□□□ 0.46
SNRNP70-203ENST00000544278 GTF2F1P35269 517 aaKnown RBP eCLIP17.95■□□□□ 0.464e-8■■■■□ 24.8
SNRNP70-203ENST00000544278 GSDMDP57764 484 aa17.95■□□□□ 0.46
SNRNP70-203ENST00000544278 VPS16Q9H269 839 aa17.95■□□□□ 0.46
SNRNP70-203ENST00000544278 ANAPC4Q9UJX5 808 aa17.95■□□□□ 0.46
SNRNP70-203ENST00000544278 LRP5O75197 1615 aa17.95■□□□□ 0.46
SNRNP70-203ENST00000544278 CACNA1SQ13698 1873 aa17.95■□□□□ 0.46
SNRNP70-203ENST00000544278 CYTH3O43739 400 aa17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 URI1O94763 535 aaPredicted RBP17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 FRMPD2Q68DX3 1309 aaPredicted RBP17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 MTRQ99707 1265 aa17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 TRIM49BA6NDI0 452 aa17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 ERICH4A6NGS2 130 aa17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 VSTM4Q8IW00 320 aa17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 RPGRQ92834 1020 aaKnown RBP17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 GJA10Q969M2 543 aa17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 NYXQ9GZU5 481 aa17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 IKBKBO14920 756 aa17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 BTDP43251 543 aa17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 KIF18AQ8NI77 898 aa17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 PHLPP1O60346 1717 aa17.94■□□□□ 0.46
SNRNP70-203ENST00000544278 FAM196BA6NMK8 535 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 SCNN1DP51172 638 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 MORC3Q14149 939 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 RRAGBQ5VZM2 374 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 PRR5LQ6MZQ0 368 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 ZNF444Q8N0Y2 327 aaPredicted RBP17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 HPS3Q969F9 1004 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 LZTFL1Q9NQ48 299 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 MYH6P13533 1939 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 SOWAHDA6NJG2 315 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 CERS3Q8IU89 383 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 BPIFA3Q9BQP9 254 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 BRMS1Q9HCU9 246 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 XDHP47989 1333 aa17.93■□□□□ 0.46
SNRNP70-203ENST00000544278 DOK7Q18PE1 504 aa17.92■□□□□ 0.46
SNRNP70-203ENST00000544278 SLC10A5Q5PT55 438 aa17.92■□□□□ 0.46
SNRNP70-203ENST00000544278 LRRC47Q8N1G4 583 aaKnown RBP17.92■□□□□ 0.46
SNRNP70-203ENST00000544278 CACNB3P54284 484 aa17.92■□□□□ 0.46
SNRNP70-203ENST00000544278 GTF2IP78347 998 aa17.92■□□□□ 0.46
SNRNP70-203ENST00000544278 MFSD14BQ5SR56 506 aa17.92■□□□□ 0.46
SNRNP70-203ENST00000544278 CCDC150Q8NCX0 1101 aa17.92■□□□□ 0.46
SNRNP70-203ENST00000544278 ANKRD2Q9GZV1 360 aa17.92■□□□□ 0.46
SNRNP70-203ENST00000544278 ST7Q9NRC1 585 aa17.92■□□□□ 0.46
SNRNP70-203ENST00000544278 TAB2Q9NYJ8 693 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms