RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ERCC3P19447 782 aa21.54■■□□□ 1.04
SUDS3-204ENST00000543473 RESTQ13127 1097 aa21.54■■□□□ 1.04
SUDS3-204ENST00000543473 RPS6KA1Q15418 735 aa21.54■■□□□ 1.04
SUDS3-204ENST00000543473 ANKRD2Q9GZV1 360 aa21.54■■□□□ 1.04
SUDS3-204ENST00000543473 hCG_1642624A0A1W2PR95 340 aa21.54■■□□□ 1.04
SUDS3-204ENST00000543473 RPL13P26373 211 aaKnown RBP21.54■■□□□ 1.04
SUDS3-204ENST00000543473 KMT5BQ4FZB7 885 aa21.54■■□□□ 1.04
SUDS3-204ENST00000543473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.54■■□□□ 1.042e-7■■■□□ 16
SUDS3-204ENST00000543473 BCORL1Q5H9F3 1711 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 ERBB3P21860 1342 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 SF3A3Q12874 501 aaKnown RBP eCLIP21.53■■□□□ 1.049e-7■■■■■ 44.5
SUDS3-204ENST00000543473 ASIC2Q16515 512 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 SLFNL1Q499Z3 407 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 ZNF589Q86UQ0 364 aaPredicted RBP21.53■■□□□ 1.04
SUDS3-204ENST00000543473 EFCAB13Q8IY85 973 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 PAF1Q8N7H5 531 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 CYP2E1P05181 493 aaPredicted RBP21.53■■□□□ 1.04
SUDS3-204ENST00000543473 RRAGAQ7L523 313 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 SMARCC2Q8TAQ2 1214 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 HYOU1Q9Y4L1 999 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 RNF40O75150 1001 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 ATP5DP30049 168 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 MTMR3Q13615 1198 aa21.53■■□□□ 1.04
SUDS3-204ENST00000543473 SEL1L2Q5TEA6 688 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 TTLL7Q6ZT98 887 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 CPSF2Q9P2I0 782 aaKnown RBP21.52■■□□□ 1.04
SUDS3-204ENST00000543473 SERPINA10Q9UK55 444 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 TCIRG1Q13488 830 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 DAAM2Q86T65 1068 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 HINFPQ9BQA5 517 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 TCP1P17987 556 aaKnown RBP21.52■■□□□ 1.04
SUDS3-204ENST00000543473 ZNF532Q9HCE3 1301 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 HGSO14964 777 aaPredicted RBP21.52■■□□□ 1.04
SUDS3-204ENST00000543473 GJC1P36383 396 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 DNM2P50570 870 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 PLCB3Q01970 1234 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 LMNTD2Q8IXW0 634 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 CROCC2H7BZ55 1655 aa21.52■■□□□ 1.04
SUDS3-204ENST00000543473 TRPM1Q7Z4N2 1603 aa21.52■■□□□ 1.03
SUDS3-204ENST00000543473 SPHKAPQ2M3C7 1700 aa21.52■■□□□ 1.03
SUDS3-204ENST00000543473 KLHL30Q0D2K2 578 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 NECTIN1Q15223 517 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 CCDC24Q8N4L8 307 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 JRKLQ9Y4A0 524 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 FGAP02671 866 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 PICALMQ13492 652 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 PUM3Q15397 648 aaKnown RBP21.51■■□□□ 1.03
SUDS3-204ENST00000543473 CARD10Q9BWT7 1032 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 CARMIL3Q8ND23 1372 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 ZMYM6O95789 1325 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 CCDC160A6NGH7 325 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 SARNPP82979 210 aaKnown RBP21.51■■□□□ 1.03
SUDS3-204ENST00000543473 CROCCP2Q86T23 111 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 CERS3Q8IU89 383 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 CACNA2D3Q8IZS8 1091 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 MORC2Q9Y6X9 1032 aaPredicted RBP21.51■■□□□ 1.03
SUDS3-204ENST00000543473 KDRP35968 1356 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 USP37Q86T82 979 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 MYO1AQ9UBC5 1043 aa21.51■■□□□ 1.03
SUDS3-204ENST00000543473 A0A087WUV0 522 aaPredicted RBP21.5■■□□□ 1.03
SUDS3-204ENST00000543473 MYO1CO00159 1063 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 CTNNA1P35221 906 aaKnown RBP21.5■■□□□ 1.03
SUDS3-204ENST00000543473 PPP4R3AQ6IN85 833 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 VSTM4Q8IW00 320 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 IQCDQ96DY2 449 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 ENC1O14682 589 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 RIMBP2O15034 1052 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 CETN3O15182 167 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 AKNAD1Q5T1N1 836 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 NLRC4Q9NPP4 1024 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 TLR7Q9NYK1 1049 aaKnown RBP21.5■■□□□ 1.03
SUDS3-204ENST00000543473 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.5■■□□□ 1.03
SUDS3-204ENST00000543473 H7C1D1 291 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 FAM13AO94988 1023 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 EEF2P13639 858 aaKnown RBP21.5■■□□□ 1.03
SUDS3-204ENST00000543473 ERCC5P28715 1186 aaPredicted RBP21.5■■□□□ 1.03
SUDS3-204ENST00000543473 FMNL3Q8IVF7 1028 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 EFCC1Q9HA90 598 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 TXKP42681 527 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 PLA2G4DQ86XP0 818 aa21.5■■□□□ 1.03
SUDS3-204ENST00000543473 PPP6R2O75170 966 aa21.49■■□□□ 1.03
SUDS3-204ENST00000543473 ATP1A3P13637 1013 aa21.49■■□□□ 1.03
SUDS3-204ENST00000543473 CCDC144BQ3MJ40 725 aa21.49■■□□□ 1.03
SUDS3-204ENST00000543473 VSIG1Q86XK7 387 aa21.49■■□□□ 1.03
SUDS3-204ENST00000543473 ADAM21Q9UKJ8 722 aa21.49■■□□□ 1.03
SUDS3-204ENST00000543473 TTC19Q6DKK2 380 aaPredicted RBP21.49■■□□□ 1.03
SUDS3-204ENST00000543473 PI4K2BQ8TCG2 481 aa21.49■■□□□ 1.03
SUDS3-204ENST00000543473 NEBLO76041 1014 aa21.49■■□□□ 1.03
SUDS3-204ENST00000543473 PROSER3Q2NL68 480 aa21.49■■□□□ 1.03
SUDS3-204ENST00000543473 SFMBT2Q5VUG0 894 aa21.49■■□□□ 1.03
SUDS3-204ENST00000543473 CCNT1O60563 726 aaKnown RBP21.49■■□□□ 1.03
SUDS3-204ENST00000543473 DBNLQ9UJU6 430 aaKnown RBP21.49■■□□□ 1.03
SUDS3-204ENST00000543473 LDHBP07195 334 aaKnown RBP21.48■■□□□ 1.03
SUDS3-204ENST00000543473 TAOK1Q7L7X3 1001 aa21.48■■□□□ 1.03
SUDS3-204ENST00000543473 ZNF654Q8IZM8 581 aa21.48■■□□□ 1.03
SUDS3-204ENST00000543473 CMTR1Q8N1G2 835 aaKnown RBP21.48■■□□□ 1.03
SUDS3-204ENST00000543473 RBL2Q08999 1139 aa21.48■■□□□ 1.03
SUDS3-204ENST00000543473 PEX26Q7Z412 305 aa21.48■■□□□ 1.03
SUDS3-204ENST00000543473 STMN2Q93045 179 aa21.48■■□□□ 1.03
SUDS3-204ENST00000543473 WDR17Q8IZU2 1322 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms