RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 WFDC3Q8IUB2 231 aa6.17□□□□□ -1.42
HDAC2-216ENST00000523628 NUP155O75694 1391 aa6.17□□□□□ -1.42
HDAC2-216ENST00000523628 CFAP65Q6ZU64 1925 aaKnown RBP6.17□□□□□ -1.42
HDAC2-216ENST00000523628 MED1Q15648 1581 aaPredicted RBP6.16□□□□□ -1.42
HDAC2-216ENST00000523628 PAPLNO95428 1278 aa6.16□□□□□ -1.42
HDAC2-216ENST00000523628 USP17L7P0C7H9 530 aa6.16□□□□□ -1.42
HDAC2-216ENST00000523628 LIG1P18858 919 aa6.16□□□□□ -1.42
HDAC2-216ENST00000523628 HDLBPQ00341 1268 aaKnown RBP6.16□□□□□ -1.42
HDAC2-216ENST00000523628 RPS26P11Q5JNZ5 115 aaPredicted RBP6.16□□□□□ -1.42
HDAC2-216ENST00000523628 C9orf131Q5VYM1 1079 aa6.16□□□□□ -1.42
HDAC2-216ENST00000523628 PRPF40BQ6NWY9 871 aaKnown RBP6.16□□□□□ -1.42
HDAC2-216ENST00000523628 ZNF574Q6ZN55 896 aaPredicted RBP6.16□□□□□ -1.42
HDAC2-216ENST00000523628 MISP3Q96FF7 219 aa6.16□□□□□ -1.42
HDAC2-216ENST00000523628 CRIM1Q9NZV1 1036 aa6.16□□□□□ -1.42
HDAC2-216ENST00000523628 GADD45BO75293 160 aaPredicted RBP6.15□□□□□ -1.42
HDAC2-216ENST00000523628 SLFN14P0C7P3 912 aa6.15□□□□□ -1.42
HDAC2-216ENST00000523628 PLCL1Q15111 1095 aa6.15□□□□□ -1.42
HDAC2-216ENST00000523628 SPRED2Q7Z698 418 aa6.15□□□□□ -1.42
HDAC2-216ENST00000523628 WDR89Q96FK6 387 aaPredicted RBP6.15□□□□□ -1.42
HDAC2-216ENST00000523628 FANCD2OSQ96PS1 177 aa6.15□□□□□ -1.42
HDAC2-216ENST00000523628 ATXN3LQ9H3M9 355 aa6.15□□□□□ -1.42
HDAC2-216ENST00000523628 CCDC86Q9H6F5 360 aaKnown RBP6.15□□□□□ -1.42
HDAC2-216ENST00000523628 VTI1BQ9UEU0 232 aa6.15□□□□□ -1.42
HDAC2-216ENST00000523628 SPATA31A6Q5VVP1 1343 aa6.15□□□□□ -1.43
HDAC2-216ENST00000523628 ARID1BQ8NFD5 2236 aaPredicted RBP6.14□□□□□ -1.43
HDAC2-216ENST00000523628 TMEM238LA0A1B0GVL6 79 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 BIN1O00499 593 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 FAM87AP0C7U9 286 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 EIF4BP23588 611 aaKnown RBP6.14□□□□□ -1.43
HDAC2-216ENST00000523628 LTKP29376 864 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 FANCCQ00597 558 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 ID3Q02535 119 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 RAD51AP2Q09MP3 1159 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 FAAP100Q0VG06 881 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 BNIP3Q12983 259 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 ZNF792Q3KQV3 632 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 NETO1Q8TDF5 533 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 ZC3H12CQ9C0D7 883 aaKnown RBP6.14□□□□□ -1.43
HDAC2-216ENST00000523628 C19orf44Q9H6X5 657 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 PIDD1Q9HB75 910 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 NLRP2Q9NX02 1062 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 TRAK1Q9UPV9 953 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 TMEM94Q12767 1356 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 JCADQ9P266 1359 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 PTCH1Q13635 1447 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 LAMC1P11047 1609 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 AHDC1Q5TGY3 1603 aaPredicted RBP6.14□□□□□ -1.43
HDAC2-216ENST00000523628 ALKQ9UM73 1620 aa6.14□□□□□ -1.43
HDAC2-216ENST00000523628 STRCP1A6NGW2 1772 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 ZNF862O60290 1169 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 TCF3P15923 654 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 ATF3P18847 181 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 ZNF157P51786 506 aaPredicted RBP6.13□□□□□ -1.43
HDAC2-216ENST00000523628 FCGRTP55899 365 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 CDK5R2Q13319 367 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 KIF4BQ2VIQ3 1234 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 SMYD4Q8IYR2 804 aaPredicted RBP6.13□□□□□ -1.43
HDAC2-216ENST00000523628 PLD6Q8N2A8 252 aaKnown RBP6.13□□□□□ -1.43
HDAC2-216ENST00000523628 FRMD6Q96NE9 622 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 KRT82Q9NSB4 513 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 SPG7Q9UQ90 795 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 USP31Q70CQ4 1352 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 ANKRD30BQ9BXX2 1392 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 ROBO1Q9Y6N7 1651 aa6.13□□□□□ -1.43
HDAC2-216ENST00000523628 XIRP1Q702N8 1843 aaKnown RBP6.13□□□□□ -1.43
HDAC2-216ENST00000523628 GIPC1O14908 333 aa6.12□□□□□ -1.43
HDAC2-216ENST00000523628 GSTP1P09211 210 aaKnown RBP6.12□□□□□ -1.43
HDAC2-216ENST00000523628 CD8BP10966 210 aa6.12□□□□□ -1.43
HDAC2-216ENST00000523628 HNRNPUQ00839 825 aaKnown RBP eCLIP6.12□□□□□ -1.43
HDAC2-216ENST00000523628 SHPRHQ149N8 1683 aa6.12□□□□□ -1.43
HDAC2-216ENST00000523628 XRN1Q8IZH2 1706 aaKnown RBP6.12□□□□□ -1.43
HDAC2-216ENST00000523628 TMEM87AQ8NBN3 555 aa6.12□□□□□ -1.43
HDAC2-216ENST00000523628 CRELD1Q96HD1 420 aa6.12□□□□□ -1.43
HDAC2-216ENST00000523628 DISC1Q9NRI5 854 aa6.12□□□□□ -1.43
HDAC2-216ENST00000523628 FAM8A1Q9UBU6 413 aa6.12□□□□□ -1.43
HDAC2-216ENST00000523628 VAV3Q9UKW4 847 aa6.12□□□□□ -1.43
HDAC2-216ENST00000523628 PCDHGC5Q9Y5F6 944 aa6.12□□□□□ -1.43
HDAC2-216ENST00000523628 MYO5BQ9ULV0 1848 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 PHLPP1O60346 1717 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 CCDC144AA2RUR9 1427 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 NAIPQ13075 1403 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 LRPPRCP42704 1394 aaKnown RBP6.11□□□□□ -1.43
HDAC2-216ENST00000523628 FBXO24O75426 580 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 FUT4P22083 530 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 HSPA1LP34931 641 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 TTLL4Q14679 1199 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 ATG4DQ86TL0 474 aaPredicted RBP6.11□□□□□ -1.43
HDAC2-216ENST00000523628 FAM181AQ8N9Y4 354 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 MKNK2Q9HBH9 465 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 MRS2Q9HD23 443 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 COPRSQ9NQ92 184 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 PCOLCE2Q9UKZ9 415 aa6.11□□□□□ -1.43
HDAC2-216ENST00000523628 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.11□□□□□ -1.43
HDAC2-216ENST00000523628 ADAMTS13Q76LX8 1427 aa6.1□□□□□ -1.43
HDAC2-216ENST00000523628 EIF3AQ14152 1382 aaKnown RBP6.1□□□□□ -1.43
HDAC2-216ENST00000523628 RNGTTO60942 597 aaKnown RBP6.1□□□□□ -1.43
HDAC2-216ENST00000523628 FGD1P98174 961 aa6.1□□□□□ -1.43
HDAC2-216ENST00000523628 PRKCQQ04759 706 aa6.1□□□□□ -1.43
HDAC2-216ENST00000523628 RASIP1Q5U651 963 aa6.1□□□□□ -1.43
HDAC2-216ENST00000523628 ZNF772Q68DY9 489 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms