RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SHROOM1Q2M3G4 852 aaPredicted RBP7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 SLC9C2Q5TAH2 1124 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 MIGA1Q8NAN2 632 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 ARRDC4Q8NCT1 418 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 FEZ1Q99689 392 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 PAGR1Q9BTK6 254 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 SPATC1LQ9H0A9 340 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 RPAP3Q9H6T3 665 aaPredicted RBP7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 ZBTB40Q9NUA8 1239 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 BTBD7Q9P203 1132 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 SAP30BPQ9UHR5 308 aaKnown RBP7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 DDX19BQ9UMR2 479 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 DIS3Q9Y2L1 958 aaKnown RBP7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 TMX2Q9Y320 296 aa7.39□□□□□ -1.23
LSM3P4-201ENST00000502948 COL6A3P12111 3177 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 ZNF532Q9HCE3 1301 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 A0A1W2PRG0 241 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 POTEB2H3BUK9 544 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 WDR46O15213 610 aaKnown RBP7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 SEPT4O43236 478 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 SLC25A27O95847 323 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 DSG3P32926 999 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 COPB2P35606 906 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 ADD2P35612 726 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 ATP2B2Q01814 1243 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 LRRC26Q2I0M4 334 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 C12orf60Q5U649 245 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 MSL3Q8N5Y2 521 aaKnown RBP7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 ACER1Q8TDN7 264 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 MOV10L1Q9BXT6 1211 aaKnown RBP7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 C1orf115Q9H7X2 142 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 MCM9Q9NXL9 1143 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 FLRT1Q9NZU1 646 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 SYNPO2Q9UMS6 1093 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 EXOC6BQ9Y2D4 811 aa7.38□□□□□ -1.23
LSM3P4-201ENST00000502948 PEX10O60683 326 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 IFIT2P09913 472 aaKnown RBP7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 HNRNPUQ00839 825 aaKnown RBP eCLIP7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 SEPT2Q15019 361 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 ZSCAN25Q6NSZ9 544 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 GIMAP6Q6P9H5 292 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 C16orf86Q6ZW13 317 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 DPP9Q86TI2 863 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 RIOX2Q8IUF8 465 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 SIAH1Q8IUQ4 282 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 AMOTL1Q8IY63 956 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 NPLOC4Q8TAT6 608 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 LRCH3Q96II8 777 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 HAUS7Q99871 368 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 UBE2OQ9C0C9 1292 aaKnown RBP7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 VCPKMTQ9H867 229 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 KANSL2Q9H9L4 492 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 ARHGEF10LQ9HCE6 1279 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 CWC22Q9HCG8 908 aaKnown RBP7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 PAG1Q9NWQ8 432 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 MTMR10Q9NXD2 777 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 ZMYND8Q9ULU4 1186 aaPredicted RBP7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 SMCHD1A6NHR9 2005 aa7.37□□□□□ -1.23
LSM3P4-201ENST00000502948 ATP2A1O14983 1001 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 ERCC3P19447 782 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 ADORA2AP29274 412 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 SBK1Q52WX2 424 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 SIRT2Q8IXJ6 389 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 LCORLQ8N3X6 602 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 DEFB123Q8N688 67 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 SLC17A8Q8NDX2 589 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 TRPV1Q8NER1 839 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 DDRGK1Q96HY6 314 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 MAML3Q96JK9 1138 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 SENP6Q9GZR1 1112 aaPredicted RBP7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 IL1RAPL2Q9NP60 686 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 ARPP21Q9UBL0 812 aaPredicted RBP7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 PRKAG2Q9UGJ0 569 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 MYH4Q9Y623 1939 aa7.36□□□□□ -1.23
LSM3P4-201ENST00000502948 TMEM265A0A087WTH1 108 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 GOLIM4O00461 696 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 COBLO75128 1261 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 FCER1AP12319 257 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 SYN1P17600 705 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 CYP2C19P33261 490 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 CDK8P49336 464 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 ICA1Q05084 483 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 ZYXQ15942 572 aaKnown RBP7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 SLC39A5Q6ZMH5 540 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 ZNF467Q7Z7K2 595 aaPredicted RBP7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 PANK1Q8TE04 598 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 SDR42E1Q8WUS8 393 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 TOX2Q96NM4 488 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 LBHD1Q9BQE6 289 aaPredicted RBP7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 TANGO6Q9C0B7 1094 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 GOPCQ9HD26 462 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 PHF24Q9UPV7 400 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 NDUFB9Q9Y6M9 179 aa7.35□□□□□ -1.23
LSM3P4-201ENST00000502948 DNAH12Q6ZR08 3092 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 USP17L12C9JPN9 530 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 KBTBD13C9JR72 458 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 USP17L21D6R901 530 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 VWA5AO00534 786 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms