RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 PUS7LQ9H0K6 701 aaKnown RBP23.19■■□□□ 1.3
CPSF7-204ENST00000413232 ATP8A2Q9NTI2 1148 aa23.19■■□□□ 1.3
CPSF7-204ENST00000413232 COL11A1P12107 1806 aaPredicted RBP23.19■■□□□ 1.3
CPSF7-204ENST00000413232 A0A0G2JMZ2 1700 aa23.19■■□□□ 1.3
CPSF7-204ENST00000413232 USP17L12C9JPN9 530 aa23.18■■□□□ 1.3
CPSF7-204ENST00000413232 USP17L21D6R901 530 aa23.18■■□□□ 1.3
CPSF7-204ENST00000413232 PTPREP23469 700 aa23.18■■□□□ 1.3
CPSF7-204ENST00000413232 UBE3CQ15386 1083 aa23.18■■□□□ 1.3
CPSF7-204ENST00000413232 WDR78Q5VTH9 848 aa23.18■■□□□ 1.3
CPSF7-204ENST00000413232 LHX8Q68G74 356 aa23.18■■□□□ 1.3
CPSF7-204ENST00000413232 TMEM179Q6ZVK1 233 aa23.18■■□□□ 1.3
CPSF7-204ENST00000413232 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.18■■□□□ 1.34e-7■■■□□ 16.7
CPSF7-204ENST00000413232 NBPF3Q9H094 633 aa23.18■■□□□ 1.3
CPSF7-204ENST00000413232 SWAP70Q9UH65 585 aa23.18■■□□□ 1.3
CPSF7-204ENST00000413232 CDK8P49336 464 aa23.17■■□□□ 1.3
CPSF7-204ENST00000413232 CCNA1P78396 465 aa23.17■■□□□ 1.3
CPSF7-204ENST00000413232 TRMT44Q8IYL2 757 aaKnown RBP23.17■■□□□ 1.3
CPSF7-204ENST00000413232 NPLOC4Q8TAT6 608 aa23.17■■□□□ 1.3
CPSF7-204ENST00000413232 STAP2Q9UGK3 403 aa23.17■■□□□ 1.3
CPSF7-204ENST00000413232 PFASO15067 1338 aa23.16■■□□□ 1.3
CPSF7-204ENST00000413232 SLC15A5A6NIM6 579 aa23.16■■□□□ 1.3
CPSF7-204ENST00000413232 COG2Q14746 738 aa23.16■■□□□ 1.3
CPSF7-204ENST00000413232 C11orf49Q9H6J7 331 aa23.16■■□□□ 1.3
CPSF7-204ENST00000413232 CWC22Q9HCG8 908 aaKnown RBP23.16■■□□□ 1.3
CPSF7-204ENST00000413232 GRB14Q14449 540 aa23.15■■□□□ 1.3
CPSF7-204ENST00000413232 TSHZ3Q63HK5 1081 aa23.15■■□□□ 1.3
CPSF7-204ENST00000413232 CTR9Q6PD62 1173 aa23.15■■□□□ 1.3
CPSF7-204ENST00000413232 C7orf61Q8IZ16 206 aa23.15■■□□□ 1.3
CPSF7-204ENST00000413232 SPICE1Q8N0Z3 855 aa23.15■■□□□ 1.3
CPSF7-204ENST00000413232 MOV10L1Q9BXT6 1211 aaKnown RBP23.15■■□□□ 1.3
CPSF7-204ENST00000413232 TANGO6Q9C0B7 1094 aa23.15■■□□□ 1.3
CPSF7-204ENST00000413232 DCTPP1Q9H773 170 aa23.15■■□□□ 1.3
CPSF7-204ENST00000413232 SLC4A4Q9Y6R1 1079 aa23.15■■□□□ 1.3
CPSF7-204ENST00000413232 GREB1LQ9C091 1923 aaPredicted RBP23.14■■□□□ 1.3
CPSF7-204ENST00000413232 IGHA2P01877 340 aa23.14■■□□□ 1.29
CPSF7-204ENST00000413232 C16orf86Q6ZW13 317 aa23.14■■□□□ 1.29
CPSF7-204ENST00000413232 ECHDC1Q9NTX5 307 aa23.14■■□□□ 1.29
CPSF7-204ENST00000413232 ZMYND8Q9ULU4 1186 aaPredicted RBP23.14■■□□□ 1.29
CPSF7-204ENST00000413232 TMX2Q9Y320 296 aa23.14■■□□□ 1.29
CPSF7-204ENST00000413232 SMCHD1A6NHR9 2005 aa23.14■■□□□ 1.29
CPSF7-204ENST00000413232 GLRX3O76003 335 aaKnown RBP23.13■■□□□ 1.29
CPSF7-204ENST00000413232 HOXC6P09630 235 aa23.13■■□□□ 1.29
CPSF7-204ENST00000413232 ICA1Q05084 483 aa23.13■■□□□ 1.29
CPSF7-204ENST00000413232 HOXC10Q9NYD6 342 aa23.13■■□□□ 1.29
CPSF7-204ENST00000413232 ZNF236Q9UL36 1845 aa23.12■■□□□ 1.29
CPSF7-204ENST00000413232 COL6A1P12109 1028 aa23.12■■□□□ 1.29
CPSF7-204ENST00000413232 DSG3P32926 999 aa23.12■■□□□ 1.29
CPSF7-204ENST00000413232 TRPV1Q8NER1 839 aa23.12■■□□□ 1.29
CPSF7-204ENST00000413232 ATG4CQ96DT6 458 aa23.12■■□□□ 1.29
CPSF7-204ENST00000413232 CCDC17Q96LX7 622 aa23.12■■□□□ 1.29
CPSF7-204ENST00000413232 STRBPQ96SI9 672 aaKnown RBP23.12■■□□□ 1.29
CPSF7-204ENST00000413232 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.12■■□□□ 1.29
CPSF7-204ENST00000413232 SPATC1LQ9H0A9 340 aa23.12■■□□□ 1.29
CPSF7-204ENST00000413232 VCPKMTQ9H867 229 aa23.12■■□□□ 1.29
CPSF7-204ENST00000413232 EEF2P13639 858 aaKnown RBP23.11■■□□□ 1.29
CPSF7-204ENST00000413232 SYN1P17600 705 aa23.11■■□□□ 1.29
CPSF7-204ENST00000413232 CYP2C19P33261 490 aa23.11■■□□□ 1.29
CPSF7-204ENST00000413232 OSBP2Q969R2 916 aa23.11■■□□□ 1.29
CPSF7-204ENST00000413232 ARHGEF10LQ9HCE6 1279 aa23.11■■□□□ 1.29
CPSF7-204ENST00000413232 IVNS1ABPQ9Y6Y0 642 aa23.11■■□□□ 1.29
CPSF7-204ENST00000413232 GSG1L2A8MUP6 293 aa23.1■■□□□ 1.29
CPSF7-204ENST00000413232 SOX1O00570 391 aaPredicted RBP23.1■■□□□ 1.29
CPSF7-204ENST00000413232 COBLO75128 1261 aa23.1■■□□□ 1.29
CPSF7-204ENST00000413232 ERCC3P19447 782 aa23.1■■□□□ 1.29
CPSF7-204ENST00000413232 MFSD14CQ5VZR4 134 aa23.1■■□□□ 1.29
CPSF7-204ENST00000413232 ZSCAN25Q6NSZ9 544 aa23.1■■□□□ 1.29
CPSF7-204ENST00000413232 KBTBD3Q8NAB2 608 aa23.1■■□□□ 1.29
CPSF7-204ENST00000413232 LPAR1Q92633 364 aa23.1■■□□□ 1.29
CPSF7-204ENST00000413232 GDF15Q99988 308 aa23.1■■□□□ 1.29
CPSF7-204ENST00000413232 FLOT1O75955 427 aa23.09■■□□□ 1.29
CPSF7-204ENST00000413232 ADORA2AP29274 412 aa23.09■■□□□ 1.29
CPSF7-204ENST00000413232 ATP2B2Q01814 1243 aa23.09■■□□□ 1.29
CPSF7-204ENST00000413232 FBXO28Q9NVF7 368 aa23.09■■□□□ 1.29
CPSF7-204ENST00000413232 PCDHB15Q9Y5E8 787 aa23.09■■□□□ 1.29
CPSF7-204ENST00000413232 MYH4Q9Y623 1939 aa23.08■■□□□ 1.29
CPSF7-204ENST00000413232 LRRC26Q2I0M4 334 aa23.08■■□□□ 1.29
CPSF7-204ENST00000413232 SAMD1Q6SPF0 538 aaPredicted RBP23.08■■□□□ 1.29
CPSF7-204ENST00000413232 STK11IPQ8N1F8 1099 aa23.08■■□□□ 1.29
CPSF7-204ENST00000413232 PLXNA1Q9UIW2 1896 aa23.08■■□□□ 1.29
CPSF7-204ENST00000413232 PLS1Q14651 629 aa23.07■■□□□ 1.28
CPSF7-204ENST00000413232 TMEM132BQ14DG7 1078 aa23.07■■□□□ 1.28
CPSF7-204ENST00000413232 DPP9Q86TI2 863 aa23.07■■□□□ 1.28
CPSF7-204ENST00000413232 AMOTL1Q8IY63 956 aa23.07■■□□□ 1.28
CPSF7-204ENST00000413232 SHCBP1Q8NEM2 672 aa23.07■■□□□ 1.28
CPSF7-204ENST00000413232 DDRGK1Q96HY6 314 aa23.07■■□□□ 1.28
CPSF7-204ENST00000413232 KANSL2Q9H9L4 492 aa23.07■■□□□ 1.28
CPSF7-204ENST00000413232 DDX20Q9UHI6 824 aaKnown RBP23.07■■□□□ 1.28
CPSF7-204ENST00000413232 ADAMTS5Q9UNA0 930 aa23.07■■□□□ 1.28
CPSF7-204ENST00000413232 WDR46O15213 610 aaKnown RBP23.06■■□□□ 1.28
CPSF7-204ENST00000413232 STRNO43815 780 aa23.06■■□□□ 1.28
CPSF7-204ENST00000413232 CYBAP13498 195 aa23.06■■□□□ 1.28
CPSF7-204ENST00000413232 RASA1P20936 1047 aa23.06■■□□□ 1.28
CPSF7-204ENST00000413232 CNGA1P29973 690 aa23.06■■□□□ 1.28
CPSF7-204ENST00000413232 SBK1Q52WX2 424 aa23.06■■□□□ 1.28
CPSF7-204ENST00000413232 MB21D1Q8N884 522 aa23.06■■□□□ 1.28
CPSF7-204ENST00000413232 OTUD7AQ8TE49 926 aaPredicted RBP23.06■■□□□ 1.28
CPSF7-204ENST00000413232 APPBP2Q92624 585 aa23.06■■□□□ 1.28
CPSF7-204ENST00000413232 LRCH3Q96II8 777 aa23.06■■□□□ 1.28
CPSF7-204ENST00000413232 EPB41L4AQ9HCS5 686 aaPredicted RBP23.06■■□□□ 1.28
CPSF7-204ENST00000413232 A0A1W2PPC1 479 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms