RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CEP131Q9UPN4 1083 aa6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.91□□□□□ -1.3
TNFSF4-201ENST00000281834 NRAPQ86VF7 1730 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 CNTNAP5Q8WYK1 1306 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 KLRF2D3W0D1 207 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 POLRMTO00411 1230 aaKnown RBP6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 PRPF3O43395 683 aaKnown RBP6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 CALM1P0DP23 149 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 CALM2P0DP24 149 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 CALM3P0DP25 149 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 PTPREP23469 700 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 ATP2B4P23634 1241 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 CHRNA5P30532 468 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 TYW1BQ6NUM6 668 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 CPLX3Q8WVH0 158 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 CEP95Q96GE4 821 aa6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 CICQ96RK0 1608 aaPredicted RBP6.9□□□□□ -1.3
TNFSF4-201ENST00000281834 DDX60Q8IY21 1712 aaKnown RBP6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 A0A087X0B3 334 aa6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 NAPAP54920 295 aa6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 FANCCQ00597 558 aa6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 FUT2Q10981 343 aa6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 LETM2Q2VYF4 491 aa6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 JAKMIP3Q5VZ66 844 aa6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 PHF20Q9BVI0 1012 aa6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 RTFDC1Q9BY42 306 aaPredicted RBP6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 PPP1R1BQ9UD71 204 aaPredicted RBP6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 HOOK1Q9UJC3 728 aaKnown RBP6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 FLT1P17948 1338 aa6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 FAM205AQ6ZU69 1335 aa6.9□□□□□ -1.31
TNFSF4-201ENST00000281834 MYH13Q9UKX3 1938 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 TMEM232C9JQI7 657 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 ORC4O43929 436 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 BBOX1O75936 387 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 DDAH1O94760 285 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 CAVIN2O95810 425 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 TNNT1P13805 278 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 RASA1P20936 1047 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 MYL5Q02045 173 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 LRRC8AQ8IWT6 810 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 USP40Q9NVE5 1235 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 NFE2L3Q9Y4A8 694 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 DAGLAQ9Y4D2 1042 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 PARP3Q9Y6F1 533 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 BMP6P22004 513 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 SFPQP23246 707 aaKnown RBP eCLIP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 SLC16A2P36021 539 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 FMR1Q06787 632 aaKnown RBP eCLIP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 HSP90AA2PQ14568 343 aaPredicted RBP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 KARSQ15046 597 aaKnown RBP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 CCDC96Q2M329 555 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 KLHL34Q8N239 644 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 MAN1B1Q9UKM7 699 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 HPSEQ9Y251 543 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 V9GYY5 206 aaPredicted RBP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 SMTNL1A8MU46 457 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 USP17L5A8MUK1 530 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 CYTH3O43739 400 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 ADRA2BP18089 450 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 NFIAQ12857 509 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 IKQ13123 557 aaPredicted RBP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 SHROOM1Q2M3G4 852 aaPredicted RBP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 WWC2Q6AWC2 1192 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 BLIDQ8IZY5 108 aa6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 SAMSN1Q9NSI8 373 aaKnown RBP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 BIN2Q9UBW5 565 aaPredicted RBP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 SCAF8Q9UPN6 1271 aaKnown RBP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 SRPRBQ9Y5M8 271 aaKnown RBP6.89□□□□□ -1.31
TNFSF4-201ENST00000281834 LRP5O75197 1615 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 TPM3P06753 285 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 PARP1P09874 1014 aaKnown RBP6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 ERCC3P19447 782 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 CERS5Q8N5B7 392 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 COA7Q96BR5 231 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 PIGSQ96S52 555 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 DDX4Q9NQI0 724 aaKnown RBP6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 SEC63Q9UGP8 760 aaKnown RBP6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 BTAF1O14981 1849 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 AKR1B1P15121 316 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 RBM6P78332 1123 aaKnown RBP6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 PFKFB3Q16875 520 aaPredicted RBP6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 SOGA3Q5TF21 947 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 KCTD1Q719H9 257 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 TULP1O00294 542 aaPredicted RBP6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 RIOK3O14730 519 aaKnown RBP6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 MARCH6O60337 910 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 CCNT1O60563 726 aaKnown RBP6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 TOP1P11387 765 aaKnown RBP6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 SNAP25P60880 206 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 NCAPHQ15003 741 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 CRY2Q49AN0 593 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 SBK1Q52WX2 424 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 C2CD5Q86YS7 1000 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 ZFPM1Q8IX07 1006 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 MRFAP1L1Q96HT8 127 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 TRIM34Q9BYJ4 488 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 MAD2L2Q9UI95 211 aa6.88□□□□□ -1.31
TNFSF4-201ENST00000281834 TPM2P07951 284 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms