RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Sem1P60897 70 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Pcdhgc5Q91XW9 944 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Q922C1 641 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Pde4bB1AWC9 736 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gm382B1AXN3 1250 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Chp1P61022 195 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Dcaf17Q3TUL7 519 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Eps8l2Q99K30 729 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Card14Q99KF0 999 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Klc4Q9DBS5 619 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Siglec1Q62230 1695 aa11.9□□□□□ -0.5
Rnf40-201ENSMUST00000033088 Gm10134F6ZQC6 126 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Pls1Q3V0K9 630 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Brinp3Q499E0 766 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Itga6Q61739 1091 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Krt74Q6IFZ9 495 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Gnl3lQ6PGG6 577 aaKnown RBP11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Epn1Q80VP1 575 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ccdc50Q810U5 305 aaKnown RBP11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Lrrd1Q8C0R9 853 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Sh2b1Q91ZM2 756 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Tekt2Q922G7 430 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Efcab2Q9CQ46 164 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Dph5Q9CWQ0 281 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Galnt15Q9D2N8 638 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Taf7Q9R1C0 341 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Mapk8ip1Q9WVI9 707 aa11.9□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Eif6O55135 245 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ppp1r21Q3TDD9 780 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Fxr1Q61584 677 aaKnown RBP11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ces3aQ63880 571 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Pex19Q8VCI5 299 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ces3bQ8VCU1 571 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Bag2Q91YN9 210 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Tubb4aQ9D6F9 444 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ehd4Q9EQP2 541 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Gm5934D3Z4U6 212 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Grin1P35438 938 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Nlrp4cQ3TKR3 982 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Tmem232Q5K6N0 675 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Cdcp1Q5U462 833 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Prpf40bQ80W14 870 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Bicd1Q8BR07 835 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ncaph2Q8BSP2 607 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Spata16Q8C636 571 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Gramd4Q8CB44 633 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Rab44Q8CB87 725 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Thap2Q9D305 217 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ubn2Q80WC1 1314 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 A0A1Y7VML8 143 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ppfia4B8QI36 1187 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Irx1P81068 480 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Uhmk1P97343 419 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Trim34aQ99PP6 485 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 AvenQ9D9K3 342 aa11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 NgdnQ9DB96 315 aaKnown RBP11.89□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Trpm3Q5F4S9 1721 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Prl3d3A0A0M6L0J6 224 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Dennd3A2RT67 1274 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Prr16A3KMN5 304 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Prl7d1P04769 244 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Il7P10168 154 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ercc5P35689 1170 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Krt86P97861 486 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Zfp781Q0P5U5 243 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Efcab14Q8BGQ6 484 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Calcoco1Q8CGU1 691 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Gm30191A0A0U1RNT7 187 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Kdm1aQ6ZQ88 853 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ccdc38Q8CDN8 563 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 SyncQ9EPM5 470 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Add2Q9QYB8 725 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ctnna1P26231 906 aaKnown RBP11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Pdrg1P59048 133 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Meis3P97368 378 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ankle2Q6P1H6 964 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Adat2Q6P6J0 191 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Bola3Q8CEI1 110 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Slc35f6Q8VE96 372 aa11.88□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ess2O70279 479 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Card10P58660 1021 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Pde4dQ01063 747 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 1700013D24RikQ0P521 120 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Sec31aQ3UPL0 1230 aaKnown RBP11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Tbc1d1Q60949 1255 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Smtnl1Q99LM3 459 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Hps5P59438 1126 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Anks6Q6GQX6 883 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Llgl1Q80Y17 1036 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Haus7Q8BKT8 364 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 LgsnQ8CIX8 563 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Q8VDP2 222 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Vps33aQ9D2N9 598 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Ctnnd1P30999 938 aaKnown RBP11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Surf6P70279 355 aaKnown RBP11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 CoilQ5SU73 570 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Mrps31Q61733 384 aaKnown RBP11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Cep128Q8BI22 1102 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Acbd3Q8BMP6 525 aa11.87□□□□□ -0.51
Rnf40-201ENSMUST00000033088 Tmem266Q8BZB3 538 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms