Protein–RNA interactions for Protein: Q60949

Tbc1d1, TBC1 domain family member 1, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbc1d1Q60949 Gm25239-201ENSMUST00000174915 86 ntBASIC41.43■■■■■ 4.22
Tbc1d1Q60949 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
Tbc1d1Q60949 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Tbc1d1Q60949 Gm24109-201ENSMUST00000175489 103 ntBASIC36.32■■■■□ 3.4
Tbc1d1Q60949 Gm15042-201ENSMUST00000120212 883 ntBASIC35.5■■■■□ 3.27
Tbc1d1Q60949 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
Tbc1d1Q60949 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.01■■■■□ 3.2
Tbc1d1Q60949 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Tbc1d1Q60949 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Tbc1d1Q60949 Gm15045-201ENSMUST00000117359 883 ntBASIC34.57■■■■□ 3.12
Tbc1d1Q60949 Gm23366-201ENSMUST00000175022 89 ntBASIC34.5■■■■□ 3.11
Tbc1d1Q60949 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Tbc1d1Q60949 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.11■■■■□ 3.05
Tbc1d1Q60949 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.83■■■■□ 3.01
Tbc1d1Q60949 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Tbc1d1Q60949 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Tbc1d1Q60949 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.69■■■□□ 2.98
Tbc1d1Q60949 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Tbc1d1Q60949 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Tbc1d1Q60949 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Tbc1d1Q60949 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
Tbc1d1Q60949 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33■■■□□ 2.87
Tbc1d1Q60949 Gm25238-201ENSMUST00000174914 89 ntBASIC32.92■■■□□ 2.86
Tbc1d1Q60949 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
Tbc1d1Q60949 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Tbc1d1Q60949 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Tbc1d1Q60949 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Tbc1d1Q60949 Psd-208ENSMUST00000224556 2034 ntBASIC32.43■■■□□ 2.78
Tbc1d1Q60949 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Tbc1d1Q60949 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.22■■■□□ 2.75
Tbc1d1Q60949 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
Tbc1d1Q60949 Gm25262-201ENSMUST00000174934 133 ntBASIC31.91■■■□□ 2.7
Tbc1d1Q60949 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Tbc1d1Q60949 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.72■■■□□ 2.67
Tbc1d1Q60949 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.63■■■□□ 2.65
Tbc1d1Q60949 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.59■■■□□ 2.65
Tbc1d1Q60949 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Tbc1d1Q60949 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.47■■■□□ 2.63
Tbc1d1Q60949 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.46■■■□□ 2.63
Tbc1d1Q60949 Gm26115-201ENSMUST00000175605 87 ntBASIC31.42■■■□□ 2.62
Tbc1d1Q60949 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Tbc1d1Q60949 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.33■■■□□ 2.61
Tbc1d1Q60949 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Tbc1d1Q60949 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Tbc1d1Q60949 Gm8109-201ENSMUST00000194076 746 ntBASIC31.18■■■□□ 2.58
Tbc1d1Q60949 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Tbc1d1Q60949 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Tbc1d1Q60949 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
Tbc1d1Q60949 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.12■■■□□ 2.57
Tbc1d1Q60949 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Tbc1d1Q60949 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Tbc1d1Q60949 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Tbc1d1Q60949 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Tbc1d1Q60949 Gm27325-201ENSMUST00000175467 74 ntBASIC30.94■■■□□ 2.54
Tbc1d1Q60949 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.89■■■□□ 2.54
Tbc1d1Q60949 Rab21-202ENSMUST00000218831 843 ntBASIC30.88■■■□□ 2.53
Tbc1d1Q60949 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Tbc1d1Q60949 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Tbc1d1Q60949 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Tbc1d1Q60949 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.69■■■□□ 2.5
Tbc1d1Q60949 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Tbc1d1Q60949 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Tbc1d1Q60949 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Tbc1d1Q60949 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Tbc1d1Q60949 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.49■■■□□ 2.47
Tbc1d1Q60949 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.48■■■□□ 2.47
Tbc1d1Q60949 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
Tbc1d1Q60949 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.42■■■□□ 2.46
Tbc1d1Q60949 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Tbc1d1Q60949 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Tbc1d1Q60949 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
Tbc1d1Q60949 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Tbc1d1Q60949 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Tbc1d1Q60949 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Tbc1d1Q60949 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Tbc1d1Q60949 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Tbc1d1Q60949 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Tbc1d1Q60949 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Tbc1d1Q60949 Gm24804-201ENSMUST00000174982 85 ntBASIC30.05■■■□□ 2.4
Tbc1d1Q60949 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Tbc1d1Q60949 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.02■■■□□ 2.4
Tbc1d1Q60949 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.97■■■□□ 2.39
Tbc1d1Q60949 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Tbc1d1Q60949 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Tbc1d1Q60949 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Tbc1d1Q60949 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Tbc1d1Q60949 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.81■■■□□ 2.36
Tbc1d1Q60949 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.75■■■□□ 2.35
Tbc1d1Q60949 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Tbc1d1Q60949 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.68■■■□□ 2.34
Tbc1d1Q60949 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.68■■■□□ 2.34
Tbc1d1Q60949 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
Tbc1d1Q60949 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Tbc1d1Q60949 Gm27322-201ENSMUST00000184007 104 ntBASIC29.63■■■□□ 2.33
Tbc1d1Q60949 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Tbc1d1Q60949 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Tbc1d1Q60949 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Tbc1d1Q60949 Zfp131-205ENSMUST00000223812 663 ntBASIC29.56■■■□□ 2.32
Tbc1d1Q60949 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Tbc1d1Q60949 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms