RNA–Protein interactions for RNA: YPL226W

NEW1, Transcript of ATP binding cassette protein, yeast

Gene NEW1, Length 3,591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEW1	YPL226W	SMC2	P38989	1170 aa	Known RBP	2.6	□□□□□ -1.99
NEW1	YPL226W	ECM1	P39715	212 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	RVS167	P39743	482 aa	Known RBP	2.6	□□□□□ -1.99
NEW1	YPL226W	IAH1	P41734	238 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	MMM1	P41800	426 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	YFL066C	P43538	392 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	YJR124C	P47159	448 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	EMC4	P53073	190 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	YGR111W	P53265	400 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	YPR053C	Q6Q5F3	151 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	RPL1A	P0CX43	217 aa	Known RBP	2.6	□□□□□ -1.99
NEW1	YPL226W	RPL1B	P0CX44	217 aa	Known RBP	2.6	□□□□□ -1.99
NEW1	YPL226W	TUP1	P16649	713 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	TRX1	P22217	103 aa	Known RBP	2.6	□□□□□ -1.99
NEW1	YPL226W	MLF3	P32047	452 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	PMT1	P33775	817 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	SLD2	P34252	453 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	JNM1	P36224	373 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	TFG2	P41896	400 aa	Predicted RBP	2.6	□□□□□ -1.99
NEW1	YPL226W	DLD2	P46681	530 aa	Known RBP	2.6	□□□□□ -1.99
NEW1	YPL226W	MNN11	P46985	422 aa	Known RBP	2.6	□□□□□ -1.99
NEW1	YPL226W	GLG2	P47011	380 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	YJL132W	P47014	750 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	SNO2	P53823	222 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	BNA5	Q05979	453 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	YPR114W	Q06107	315 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	ARR1	Q06596	294 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	GNT1	Q12096	491 aa		2.6	□□□□□ -1.99
NEW1	YPL226W	BRF1	P29056	596 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	SEC65	P29478	273 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	YME2	P32843	850 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	SCD5	P34758	872 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	TGL4	P36165	910 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	ERP2	P39704	215 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	YEL028W	P39989	153 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	TMN3	P40071	706 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	MNT2	P53059	558 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	CDC55	Q00362	526 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	BET4	Q00618	327 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	PPN1	Q04119	674 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	RPC11	Q04307	110 aa	Predicted RBP	2.59	□□□□□ -1.99
NEW1	YPL226W	YLR287C	Q05881	355 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	THI73	Q07904	523 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	TRE2	Q08693	809 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	RTT10	Q08924	1013 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	GFA1	P14742	717 aa	Known RBP	2.59	□□□□□ -1.99
NEW1	YPL226W	KNS1	P32350	737 aa	Predicted RBP	2.59	□□□□□ -1.99
NEW1	YPL226W	YKL050C	P35736	922 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	RPC37	P36121	282 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	TAE1	P38340	232 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	MSR1	P38714	643 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	YHL041W	P38730	149 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	RTT107	P38850	1070 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	VFA1	P40080	203 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	ASN2	P49090	572 aa	Known RBP	2.59	□□□□□ -1.99
NEW1	YPL226W	TAD1	P53065	400 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	NRM1	P53718	249 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	YNL165W	P53891	406 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	DMA2	P53924	522 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	GRX3	Q03835	250 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	YML096W	Q04489	525 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	KAP95	Q06142	861 aa	Known RBP	2.59	□□□□□ -1.99
NEW1	YPL226W	ATG10	Q07879	167 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	SRO7	Q12038	1033 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	GPM3	Q12326	303 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	AFI1	Q99222	893 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	SEY1	Q99287	776 aa		2.59	□□□□□ -1.99
NEW1	YPL226W	GAL4	P04386	881 aa		2.59	□□□□□ -2
NEW1	YPL226W	SBP1	P10080	294 aa	Known RBP	2.59	□□□□□ -2
NEW1	YPL226W	CDC3	P32457	520 aa	Known RBP	2.59	□□□□□ -2
NEW1	YPL226W	RPN12	P32496	274 aa		2.59	□□□□□ -2
NEW1	YPL226W	RPS10B	P46784	105 aa	Known RBP	2.59	□□□□□ -2
NEW1	YPL226W	JJJ1	P53863	590 aa		2.59	□□□□□ -2
NEW1	YPL226W	IPI3	P53877	555 aa		2.59	□□□□□ -2
NEW1	YPL226W	NOP15	P53927	220 aa	Predicted RBP	2.59	□□□□□ -2
NEW1	YPL226W	YNL040W	P53960	456 aa	Predicted RBP	2.59	□□□□□ -2
NEW1	YPL226W	RRB1	Q04225	511 aa	Known RBP	2.59	□□□□□ -2
NEW1	YPL226W	RPS10A	Q08745	105 aa	Predicted RBP	2.59	□□□□□ -2
NEW1	YPL226W	RKM5	Q12367	367 aa		2.59	□□□□□ -2
NEW1	YPL226W	EFG1	Q3E705	233 aa	Known RBP	2.59	□□□□□ -2
NEW1	YPL226W	YKR104W	P0CE69	306 aa		2.58	□□□□□ -2
NEW1	YPL226W	SCH9	P11792	824 aa	Known RBP	2.58	□□□□□ -2
NEW1	YPL226W	SEC23	P15303	768 aa	Known RBP	2.58	□□□□□ -2
NEW1	YPL226W	ATE1	P16639	503 aa		2.58	□□□□□ -2
NEW1	YPL226W	PMA2	P19657	947 aa		2.58	□□□□□ -2
NEW1	YPL226W	CLN1	P20437	546 aa		2.58	□□□□□ -2
NEW1	YPL226W	MRPS28	P21771	286 aa		2.58	□□□□□ -2
NEW1	YPL226W	CIN8	P27895	1000 aa		2.58	□□□□□ -2
NEW1	YPL226W	BIT2	P38346	545 aa		2.58	□□□□□ -2
NEW1	YPL226W	ELO1	P39540	310 aa		2.58	□□□□□ -2
NEW1	YPL226W	PAN6	P40459	309 aa		2.58	□□□□□ -2
NEW1	YPL226W	YIL108W	P40483	696 aa	Known RBP	2.58	□□□□□ -2
NEW1	YPL226W	SPC105	P53148	917 aa		2.58	□□□□□ -2
NEW1	YPL226W	UME1	Q03010	460 aa		2.58	□□□□□ -2
NEW1	YPL226W	YDR131C	Q03899	556 aa		2.58	□□□□□ -2
NEW1	YPL226W	TY1A-DR2	Q03964	440 aa	Known RBP	2.58	□□□□□ -2
NEW1	YPL226W	TDA6	Q06466	467 aa		2.58	□□□□□ -2
NEW1	YPL226W	SWC7	Q06707	132 aa		2.58	□□□□□ -2
NEW1	YPL226W	OPY2	Q06810	360 aa		2.58	□□□□□ -2
NEW1	YPL226W	PDC5	P16467	563 aa	Known RBP	2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms