RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W AUR1P36107 401 aaPredicted RBP2.47□□□□□ -2.01
VPS16YPL045W KTR3P38130 404 aaPredicted RBP2.47□□□□□ -2.01
VPS16YPL045W RXT2P38255 430 aa2.47□□□□□ -2.01
VPS16YPL045W AMA1P50082 593 aa2.47□□□□□ -2.01
VPS16YPL045W GLO1P50107 326 aa2.47□□□□□ -2.01
VPS16YPL045W SGF73P53165 657 aa2.47□□□□□ -2.01
VPS16YPL045W BTN2P53286 410 aa2.47□□□□□ -2.01
VPS16YPL045W VPS9P54787 451 aa2.47□□□□□ -2.01
VPS16YPL045W GCN5Q03330 439 aa2.47□□□□□ -2.01
VPS16YPL045W SKG3Q06315 1026 aa2.47□□□□□ -2.01
VPS16YPL045W ACK1Q07622 623 aaPredicted RBP2.47□□□□□ -2.01
VPS16YPL045W RIX7Q07844 837 aaKnown RBP2.47□□□□□ -2.01
VPS16YPL045W PGC1Q08959 321 aa2.47□□□□□ -2.01
VPS16YPL045W SWT1Q12104 458 aa2.47□□□□□ -2.01
VPS16YPL045W SPT7P35177 1332 aa2.47□□□□□ -2.01
VPS16YPL045W MMS22Q06164 1454 aa2.47□□□□□ -2.01
VPS16YPL045W DNF1P32660 1571 aa2.47□□□□□ -2.01
VPS16YPL045W CYB2P00175 591 aa2.46□□□□□ -2.01
VPS16YPL045W SES1P07284 462 aaKnown RBP2.46□□□□□ -2.01
VPS16YPL045W PRP28P23394 588 aa2.46□□□□□ -2.01
VPS16YPL045W MNE1P24720 663 aa2.46□□□□□ -2.01
VPS16YPL045W CAD1P24813 409 aaKnown RBP2.46□□□□□ -2.01
VPS16YPL045W GBP2P25555 427 aaKnown RBP RIP-Chip data2.46□□□□□ -2.01not detected
VPS16YPL045W CDC20P26309 610 aa2.46□□□□□ -2.01
VPS16YPL045W MVD1P32377 396 aaKnown RBP2.46□□□□□ -2.01
VPS16YPL045W YKL100CP34248 587 aa2.46□□□□□ -2.01
VPS16YPL045W GCS1P35197 352 aa2.46□□□□□ -2.01
VPS16YPL045W HRB1P38922 454 aaKnown RBP RIP-Chip data2.46□□□□□ -2.01not detected
VPS16YPL045W PIG2P40187 538 aa2.46□□□□□ -2.01
VPS16YPL045W YIL161WP40449 235 aaKnown RBP2.46□□□□□ -2.01
VPS16YPL045W MLP2P40457 1679 aa2.46□□□□□ -2.01
VPS16YPL045W DJP1P40564 432 aa2.46□□□□□ -2.01
VPS16YPL045W YIR042CP40586 236 aa2.46□□□□□ -2.01
VPS16YPL045W ROK1P45818 564 aaPredicted RBP2.46□□□□□ -2.01
VPS16YPL045W LYS4P49367 693 aaPredicted RBP2.46□□□□□ -2.01
VPS16YPL045W JJJ1P53863 590 aa2.46□□□□□ -2.01
VPS16YPL045W YML119WQ03208 357 aa2.46□□□□□ -2.01
VPS16YPL045W LAS17Q12446 633 aa2.46□□□□□ -2.01
VPS16YPL045W SPE4Q12455 300 aa2.46□□□□□ -2.01
VPS16YPL045W YPR053CQ6Q5F3 151 aa2.46□□□□□ -2.01
VPS16YPL045W YOR019WQ99248 730 aa2.46□□□□□ -2.01
VPS16YPL045W YRF1-1P0CX20 1796 aa2.46□□□□□ -2.02
VPS16YPL045W YRF1-5P0CX21 1796 aa2.46□□□□□ -2.02
VPS16YPL045W YRF1-8P0CX22 1796 aa2.46□□□□□ -2.02
VPS16YPL045W STE50P25344 346 aa2.46□□□□□ -2.02
VPS16YPL045W GPI10P30777 616 aa2.46□□□□□ -2.02
VPS16YPL045W YBR053CP38235 358 aa2.46□□□□□ -2.02
VPS16YPL045W SMF1P38925 575 aa2.46□□□□□ -2.02
VPS16YPL045W PES4P39684 611 aa2.46□□□□□ -2.02
VPS16YPL045W MET28P40573 187 aa2.46□□□□□ -2.02
VPS16YPL045W IME4P41833 600 aa2.46□□□□□ -2.02
VPS16YPL045W MPS3P47069 682 aa2.46□□□□□ -2.02
VPS16YPL045W LCL3P53153 274 aa2.46□□□□□ -2.02
VPS16YPL045W IMO32P53219 342 aa2.46□□□□□ -2.02
VPS16YPL045W NNF2P53253 936 aa2.46□□□□□ -2.02
VPS16YPL045W EFR3Q03653 782 aaKnown RBP2.46□□□□□ -2.02
VPS16YPL045W USA1Q03714 838 aa2.46□□□□□ -2.02
VPS16YPL045W YDR132CQ03900 495 aa2.46□□□□□ -2.02
VPS16YPL045W YLR224WQ05947 369 aa2.46□□□□□ -2.02
VPS16YPL045W IZH3Q07959 543 aa2.46□□□□□ -2.02
VPS16YPL045W FRE5Q08908 694 aa2.46□□□□□ -2.02
VPS16YPL045W LYS21Q12122 440 aaKnown RBP2.46□□□□□ -2.02
VPS16YPL045W PRS5Q12265 496 aaKnown RBP2.46□□□□□ -2.02
VPS16YPL045W YML003WP0CF16 290 aa2.45□□□□□ -2.02
VPS16YPL045W APE1P14904 514 aa2.45□□□□□ -2.02
VPS16YPL045W PWP1P21304 576 aaKnown RBP2.45□□□□□ -2.02
VPS16YPL045W LRE1P25579 583 aaKnown RBP2.45□□□□□ -2.02
VPS16YPL045W MDL1P33310 695 aa2.45□□□□□ -2.02
VPS16YPL045W SAS3P34218 831 aa2.45□□□□□ -2.02
VPS16YPL045W MRPL7P36519 292 aa2.45□□□□□ -2.02
VPS16YPL045W MAL33P38157 468 aa2.45□□□□□ -2.02
VPS16YPL045W MET18P40469 1032 aa2.45□□□□□ -2.02
VPS16YPL045W MPP10P47083 593 aaKnown RBP2.45□□□□□ -2.02
VPS16YPL045W UBC11P52492 156 aa2.45□□□□□ -2.02
VPS16YPL045W MRPL22P53881 309 aa2.45□□□□□ -2.02
VPS16YPL045W ERB1Q04660 807 aaKnown RBP2.45□□□□□ -2.02
VPS16YPL045W YEH1Q07804 573 aa2.45□□□□□ -2.02
VPS16YPL045W VTH1P40438 1549 aa2.45□□□□□ -2.02
VPS16YPL045W VTH2P40890 1549 aa2.45□□□□□ -2.02
VPS16YPL045W AAD3P25612 363 aa2.45□□□□□ -2.02
VPS16YPL045W NTH1P32356 751 aa2.45□□□□□ -2.02
VPS16YPL045W STB6P36085 766 aa2.45□□□□□ -2.02
VPS16YPL045W YKR073CP36153 106 aa2.45□□□□□ -2.02
VPS16YPL045W CTP1P38152 299 aa2.45□□□□□ -2.02
VPS16YPL045W REG2P38232 338 aa2.45□□□□□ -2.02
VPS16YPL045W SDH8P38345 138 aa2.45□□□□□ -2.02
VPS16YPL045W YJL206CP39529 758 aa2.45□□□□□ -2.02
VPS16YPL045W YIL166CP40445 542 aa2.45□□□□□ -2.02
VPS16YPL045W MUP1P50276 574 aa2.45□□□□□ -2.02
VPS16YPL045W PAN2P53010 1115 aaPredicted RBP2.45□□□□□ -2.02
VPS16YPL045W YGL036WP53185 909 aaPredicted RBP2.45□□□□□ -2.02
VPS16YPL045W CIK1Q01649 594 aa2.45□□□□□ -2.02
VPS16YPL045W ATG23Q06671 453 aa2.45□□□□□ -2.02
VPS16YPL045W ESC8Q08119 714 aa2.45□□□□□ -2.02
VPS16YPL045W TCO89Q08921 799 aa2.45□□□□□ -2.02
VPS16YPL045W YPL272CQ08984 517 aa2.45□□□□□ -2.02
VPS16YPL045W RIM20Q12033 661 aa2.45□□□□□ -2.02
VPS16YPL045W PAR32Q12515 295 aaKnown RBP2.45□□□□□ -2.02
VPS16YPL045W YBR255C-AQ3E776 120 aa2.45□□□□□ -2.02
VPS16YPL045W YPT6Q99260 215 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms