RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C ERG8P24521 451 aa2.72□□□□□ -1.97
DNL4YOR005C DEP1P31385 405 aa2.72□□□□□ -1.97
DNL4YOR005C SPC110P32380 944 aa2.72□□□□□ -1.97
DNL4YOR005C AKR1P39010 764 aa2.72□□□□□ -1.97
DNL4YOR005C MEP1P40260 492 aa2.72□□□□□ -1.97
DNL4YOR005C MET12P46151 657 aa2.72□□□□□ -1.97
DNL4YOR005C NCS6P53088 359 aa2.72□□□□□ -1.97
DNL4YOR005C COX18P53239 316 aa2.72□□□□□ -1.97
DNL4YOR005C JJJ1P53863 590 aa2.72□□□□□ -1.97
DNL4YOR005C CIK1Q01649 594 aa2.72□□□□□ -1.97
DNL4YOR005C PKH1Q03407 766 aa2.72□□□□□ -1.97
DNL4YOR005C SSY1Q03770 852 aa2.72□□□□□ -1.97
DNL4YOR005C ECM22Q05958 814 aaPredicted RBP2.72□□□□□ -1.97
DNL4YOR005C PEX19Q07418 342 aa2.72□□□□□ -1.97
DNL4YOR005C RLP24Q07915 199 aaKnown RBP2.72□□□□□ -1.97
DNL4YOR005C AIM41Q12032 185 aa2.72□□□□□ -1.97
DNL4YOR005C GET3Q12154 354 aaKnown RBP2.72□□□□□ -1.97
DNL4YOR005C ECM3Q99252 613 aa2.72□□□□□ -1.97
DNL4YOR005C VCX1Q99385 411 aa2.72□□□□□ -1.97
DNL4YOR005C GLT1Q12680 2145 aaKnown RBP2.72□□□□□ -1.97
DNL4YOR005C TUP1P16649 713 aa2.72□□□□□ -1.97
DNL4YOR005C GCD7P32502 381 aaPredicted RBP2.72□□□□□ -1.97
DNL4YOR005C EHT1P38295 451 aa2.72□□□□□ -1.97
DNL4YOR005C TDP1P38319 544 aa2.72□□□□□ -1.97
DNL4YOR005C MPT5P39016 859 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
DNL4YOR005C YEL057CP39983 233 aa2.72□□□□□ -1.97
DNL4YOR005C GET2P40056 285 aa2.72□□□□□ -1.97
DNL4YOR005C RGI2P40188 164 aa2.72□□□□□ -1.97
DNL4YOR005C CHA4P43634 648 aa2.72□□□□□ -1.97
DNL4YOR005C ROK1P45818 564 aaPredicted RBP2.72□□□□□ -1.97
DNL4YOR005C TEX1P53851 422 aaKnown RBP2.72□□□□□ -1.97
DNL4YOR005C SLU7Q02775 382 aaKnown RBP2.72□□□□□ -1.97
DNL4YOR005C FDC1Q03034 503 aa2.72□□□□□ -1.97
DNL4YOR005C SWM1Q12379 170 aa2.72□□□□□ -1.97
DNL4YOR005C YOL159C-AQ3E769 90 aa2.72□□□□□ -1.97
DNL4YOR005C ATP2P00830 511 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C SES1P07284 462 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C CBS1P14066 229 aa2.71□□□□□ -1.98
DNL4YOR005C PWP1P21304 576 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C MNE1P24720 663 aa2.71□□□□□ -1.98
DNL4YOR005C CLB1P24868 471 aa2.71□□□□□ -1.98
DNL4YOR005C STE50P25344 346 aa2.71□□□□□ -1.98
DNL4YOR005C EFT1P32324 842 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C DCG1P32460 244 aa2.71□□□□□ -1.98
DNL4YOR005C MDL1P33310 695 aa2.71□□□□□ -1.98
DNL4YOR005C UBP13P38187 747 aa2.71□□□□□ -1.98
DNL4YOR005C YBL029WP38201 376 aa2.71□□□□□ -1.98
DNL4YOR005C STB5P38699 743 aa2.71□□□□□ -1.98
DNL4YOR005C MET18P40469 1032 aa2.71□□□□□ -1.98
DNL4YOR005C MET28P40573 187 aa2.71□□□□□ -1.98
DNL4YOR005C TAM41P53230 385 aa2.71□□□□□ -1.98
DNL4YOR005C YNR061CP53747 219 aa2.71□□□□□ -1.98
DNL4YOR005C INN1P53901 409 aa2.71□□□□□ -1.98
DNL4YOR005C CTF4Q01454 927 aa2.71□□□□□ -1.98
DNL4YOR005C MRS2Q01926 470 aa2.71□□□□□ -1.98
DNL4YOR005C YPL108WQ02872 168 aaPredicted RBP2.71□□□□□ -1.98
DNL4YOR005C NGL2Q03264 515 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C PRP3Q03338 469 aaPredicted RBP2.71□□□□□ -1.98
DNL4YOR005C CSI1Q04368 295 aa2.71□□□□□ -1.98
DNL4YOR005C HPF1Q05164 967 aa2.71□□□□□ -1.98
DNL4YOR005C ARR3Q06598 404 aa2.71□□□□□ -1.98
DNL4YOR005C TMA16Q08687 178 aa2.71□□□□□ -1.98
DNL4YOR005C SMF3Q12078 473 aaPredicted RBP2.71□□□□□ -1.98
DNL4YOR005C RPS9BP05755 195 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C CTT1P06115 562 aa2.71□□□□□ -1.98
DNL4YOR005C VPS33P20795 691 aa2.71□□□□□ -1.98
DNL4YOR005C MSB1P21339 1137 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C PEX1P24004 1043 aa2.71□□□□□ -1.98
DNL4YOR005C PEP3P27801 918 aa2.71□□□□□ -1.98
DNL4YOR005C CAP1P28495 268 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C PRE2P30656 287 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C GPI10P30777 616 aa2.71□□□□□ -1.98
DNL4YOR005C SAF1P38352 637 aa2.71□□□□□ -1.98
DNL4YOR005C LRO1P40345 661 aa2.71□□□□□ -1.98
DNL4YOR005C ZAP1P47043 880 aa2.71□□□□□ -1.98
DNL4YOR005C COS12P53053 380 aa2.71□□□□□ -1.98
DNL4YOR005C PRP43P53131 767 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C SGF73P53165 657 aa2.71□□□□□ -1.98
DNL4YOR005C MUB1Q03162 620 aa2.71□□□□□ -1.98
DNL4YOR005C TGL5Q12043 749 aa2.71□□□□□ -1.98
DNL4YOR005C NUS1Q12063 375 aa2.71□□□□□ -1.98
DNL4YOR005C LPX1Q12405 387 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C PAR32Q12515 295 aaKnown RBP2.71□□□□□ -1.98
DNL4YOR005C CYC1P00044 109 aaPredicted RBP2.7□□□□□ -1.98
DNL4YOR005C HIS5P07172 385 aa2.7□□□□□ -1.98
DNL4YOR005C APE1P14904 514 aa2.7□□□□□ -1.98
DNL4YOR005C PRE10P21242 288 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
DNL4YOR005C PRE8P23639 250 aa2.7□□□□□ -1.98
DNL4YOR005C PUP2P32379 260 aa2.7□□□□□ -1.98
DNL4YOR005C PGM1P33401 570 aaKnown RBP2.7□□□□□ -1.98
DNL4YOR005C GCS1P35197 352 aa2.7□□□□□ -1.98
DNL4YOR005C ALY1P36117 915 aa2.7□□□□□ -1.98
DNL4YOR005C SRO77P38163 1010 aa2.7□□□□□ -1.98
DNL4YOR005C SMF1P38925 575 aa2.7□□□□□ -1.98
DNL4YOR005C LYS9P38999 446 aa2.7□□□□□ -1.98
DNL4YOR005C BUD16P39988 312 aa2.7□□□□□ -1.98
DNL4YOR005C ARB1P40024 610 aaKnown RBP2.7□□□□□ -1.98
DNL4YOR005C ASE1P50275 885 aa2.7□□□□□ -1.98
DNL4YOR005C CWC22P53333 577 aaKnown RBP2.7□□□□□ -1.98
DNL4YOR005C CLU1Q03690 1277 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms