RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C RPS10BP46784 105 aaKnown RBP8.68□□□□□ -1.02
RPD3YNL330C ASI2P53895 289 aa8.68□□□□□ -1.02
RPD3YNL330C SLM2P53955 656 aa8.68□□□□□ -1.02
RPD3YNL330C YNL010WP53981 241 aaKnown RBP8.68□□□□□ -1.02
RPD3YNL330C ASI1P54074 624 aa8.68□□□□□ -1.02
RPD3YNL330C STP1Q00947 519 aa8.68□□□□□ -1.02
RPD3YNL330C HDA3Q06623 655 aa8.68□□□□□ -1.02
RPD3YNL330C PSR1Q07800 427 aa8.68□□□□□ -1.02
RPD3YNL330C RPS10AQ08745 105 aaPredicted RBP8.68□□□□□ -1.02
RPD3YNL330C NBP2Q12163 236 aa8.68□□□□□ -1.02
RPD3YNL330C MET16P18408 261 aaPredicted RBP8.67□□□□□ -1.02
RPD3YNL330C PHO87P25360 923 aa8.67□□□□□ -1.02
RPD3YNL330C RSA4P25382 515 aaKnown RBP8.67□□□□□ -1.02
RPD3YNL330C PAT1P25644 796 aaKnown RBP8.67□□□□□ -1.02
RPD3YNL330C CSM1P25651 190 aa8.67□□□□□ -1.02
RPD3YNL330C LHS1P36016 881 aa8.67□□□□□ -1.02
RPD3YNL330C UTP9P38882 575 aaKnown RBP8.67□□□□□ -1.02
RPD3YNL330C YJR061WP40355 935 aa8.67□□□□□ -1.02
RPD3YNL330C UBP7P40453 1071 aa8.67□□□□□ -1.02
RPD3YNL330C HPM1P40481 377 aa8.67□□□□□ -1.02
RPD3YNL330C MPH1P40562 993 aa8.67□□□□□ -1.02
RPD3YNL330C GET1P53192 235 aa8.67□□□□□ -1.02
RPD3YNL330C DCP2P53550 970 aaKnown RBP8.67□□□□□ -1.02
RPD3YNL330C ARC35P53731 342 aaKnown RBP8.67□□□□□ -1.02
RPD3YNL330C NAN1Q02931 896 aaKnown RBP8.67□□□□□ -1.02
RPD3YNL330C AIM32Q04689 311 aa8.67□□□□□ -1.02
RPD3YNL330C GLO2Q05584 274 aa8.67□□□□□ -1.02
RPD3YNL330C GGA1Q06336 557 aa8.67□□□□□ -1.02
RPD3YNL330C PIB1Q06651 286 aa8.67□□□□□ -1.02
RPD3YNL330C SYT1Q06836 1226 aa8.67□□□□□ -1.02
RPD3YNL330C NSE1Q07913 336 aa8.67□□□□□ -1.02
RPD3YNL330C UBR2Q07963 1872 aa8.67□□□□□ -1.02
RPD3YNL330C NSL1Q12143 216 aa8.67□□□□□ -1.02
RPD3YNL330C REC8Q12188 680 aa8.67□□□□□ -1.02
RPD3YNL330C GAL80P04387 435 aa8.66□□□□□ -1.02
RPD3YNL330C ERG20P08524 352 aaKnown RBP8.66□□□□□ -1.02
RPD3YNL330C APE1P14904 514 aa8.66□□□□□ -1.02
RPD3YNL330C DAL1P32375 460 aa8.66□□□□□ -1.02
RPD3YNL330C PUP2P32379 260 aa8.66□□□□□ -1.02
RPD3YNL330C UBX7P38349 436 aa8.66□□□□□ -1.02
RPD3YNL330C MNN1P39106 762 aa8.66□□□□□ -1.02
RPD3YNL330C NPT1P39683 429 aaKnown RBP8.66□□□□□ -1.02
RPD3YNL330C PRM2P40534 656 aa8.66□□□□□ -1.02
RPD3YNL330C ROK1P45818 564 aaPredicted RBP8.66□□□□□ -1.02
RPD3YNL330C AIF1P52923 378 aa8.66□□□□□ -1.02
RPD3YNL330C NOP19P53317 196 aaPredicted RBP8.66□□□□□ -1.02
RPD3YNL330C YNL115CP53925 644 aa8.66□□□□□ -1.02
RPD3YNL330C YNL011CP53980 444 aa8.66□□□□□ -1.02
RPD3YNL330C LSM3P57743 89 aaKnown RBP8.66□□□□□ -1.02
RPD3YNL330C ARA2Q04212 335 aa8.66□□□□□ -1.02
RPD3YNL330C YMR226CQ05016 267 aaKnown RBP8.66□□□□□ -1.02
RPD3YNL330C CDA1Q06702 301 aa8.66□□□□□ -1.02
RPD3YNL330C BUD20Q08004 166 aaPredicted RBP8.66□□□□□ -1.02
RPD3YNL330C GPM2Q12008 311 aa8.66□□□□□ -1.02
RPD3YNL330C VIK1Q12045 647 aa8.66□□□□□ -1.02
RPD3YNL330C ARP7Q12406 477 aa8.66□□□□□ -1.02
RPD3YNL330C CMR1Q12510 522 aaKnown RBP8.66□□□□□ -1.02
RPD3YNL330C CCP1P00431 361 aa8.65□□□□□ -1.02
RPD3YNL330C HIS1P00498 297 aaKnown RBP8.65□□□□□ -1.02
RPD3YNL330C ATP6P00854 259 aa8.65□□□□□ -1.02
RPD3YNL330C SUI3P09064 285 aaKnown RBP8.65□□□□□ -1.02
RPD3YNL330C HVG1P0CE11 249 aa8.65□□□□□ -1.02
RPD3YNL330C YIH1P25637 258 aa8.65□□□□□ -1.02
RPD3YNL330C YCR090CP25654 182 aaKnown RBP8.65□□□□□ -1.02
RPD3YNL330C TKL2P33315 681 aa8.65□□□□□ -1.02
RPD3YNL330C MRP21P38175 177 aa8.65□□□□□ -1.02
RPD3YNL330C FUI1P38196 639 aa8.65□□□□□ -1.02
RPD3YNL330C PIK1P39104 1066 aa8.65□□□□□ -1.02
RPD3YNL330C NUP60P39705 539 aa8.65□□□□□ -1.02
RPD3YNL330C CDC1P40986 491 aa8.65□□□□□ -1.02
RPD3YNL330C SKP2P42843 763 aa8.65□□□□□ -1.02
RPD3YNL330C BNA3P47039 444 aaKnown RBP8.65□□□□□ -1.02
RPD3YNL330C NRD1P53617 575 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
RPD3YNL330C SIW14P53965 281 aa8.65□□□□□ -1.02
RPD3YNL330C SKI8Q02793 397 aaPredicted RBP8.65□□□□□ -1.02
RPD3YNL330C HSP31Q04432 237 aa8.65□□□□□ -1.02
RPD3YNL330C GMC2Q06201 188 aa8.65□□□□□ -1.02
RPD3YNL330C YOL019WQ08157 551 aa8.65□□□□□ -1.02
RPD3YNL330C MUM3Q08750 479 aa8.65□□□□□ -1.02
RPD3YNL330C YOR022CQ12204 715 aa8.65□□□□□ -1.02
RPD3YNL330C SPE1P08432 466 aa8.64□□□□□ -1.03
RPD3YNL330C SSA4P22202 642 aaKnown RBP8.64□□□□□ -1.03
RPD3YNL330C TRX2P22803 104 aaKnown RBP8.64□□□□□ -1.03
RPD3YNL330C CNA1P23287 553 aa8.64□□□□□ -1.03
RPD3YNL330C DPB2P24482 689 aaPredicted RBP8.64□□□□□ -1.03
RPD3YNL330C ADY2P25613 283 aa8.64□□□□□ -1.03
RPD3YNL330C MRS6P32864 603 aaKnown RBP8.64□□□□□ -1.03
RPD3YNL330C SPC42P36094 363 aa8.64□□□□□ -1.03
RPD3YNL330C YFL040WP43562 540 aa8.64□□□□□ -1.03
RPD3YNL330C GUF1P46943 645 aa8.64□□□□□ -1.03
RPD3YNL330C ARH1P48360 493 aa8.64□□□□□ -1.03
RPD3YNL330C NCS6P53088 359 aa8.64□□□□□ -1.03
RPD3YNL330C TRS31Q03337 283 aa8.64□□□□□ -1.03
RPD3YNL330C YDR179W-AQ03983 463 aa8.64□□□□□ -1.03
RPD3YNL330C SPG3Q04398 127 aaPredicted RBP8.64□□□□□ -1.03
RPD3YNL330C YDR109CQ04585 715 aa8.64□□□□□ -1.03
RPD3YNL330C HRD3Q05787 833 aa8.64□□□□□ -1.03
RPD3YNL330C SWC7Q06707 132 aa8.64□□□□□ -1.03
RPD3YNL330C YDL121CQ07541 149 aa8.64□□□□□ -1.03
RPD3YNL330C YEH2Q07950 538 aa8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms