RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W RPM2Q02773 1202 aa2.49□□□□□ -2.01
UBP15YMR304W TY1A-DR2Q03964 440 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W YKU80Q04437 629 aa2.49□□□□□ -2.01
UBP15YMR304W YLR455WQ06188 304 aa2.49□□□□□ -2.01
UBP15YMR304W MHR1Q06630 226 aa2.49□□□□□ -2.01
UBP15YMR304W YEH2Q07950 538 aa2.49□□□□□ -2.01
UBP15YMR304W VPS54Q12071 889 aa2.49□□□□□ -2.01
UBP15YMR304W TIP41Q12199 356 aa2.49□□□□□ -2.01
UBP15YMR304W MED4Q12343 284 aa2.49□□□□□ -2.01
UBP15YMR304W YOR012WQ12351 137 aa2.49□□□□□ -2.01
UBP15YMR304W YGR161W-CQ3E744 92 aa2.49□□□□□ -2.01
UBP15YMR304W URA3P03962 267 aa2.49□□□□□ -2.01
UBP15YMR304W PET54P10834 293 aa2.49□□□□□ -2.01
UBP15YMR304W GFA1P14742 717 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W EST1P17214 699 aaPredicted RBP2.49□□□□□ -2.01
UBP15YMR304W PRP2P20095 876 aaPredicted RBP2.49□□□□□ -2.01
UBP15YMR304W ATP12P22135 325 aa2.49□□□□□ -2.01
UBP15YMR304W RPD3P32561 433 aa2.49□□□□□ -2.01
UBP15YMR304W SHP1P34223 423 aa2.49□□□□□ -2.01
UBP15YMR304W SCD5P34758 872 aa2.49□□□□□ -2.01
UBP15YMR304W HMF1P40037 129 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W SOK1P40317 901 aa2.49□□□□□ -2.01
UBP15YMR304W RLP7P40693 322 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W ARO8P53090 500 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W RPT4P53549 437 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W KTR5P53966 522 aaPredicted RBP2.49□□□□□ -2.01
UBP15YMR304W YPL014WQ02606 381 aa2.49□□□□□ -2.01
UBP15YMR304W YPL113CQ02961 396 aa2.49□□□□□ -2.01
UBP15YMR304W EBS1Q03466 884 aaKnown RBP2.49□□□□□ -2.01
UBP15YMR304W PHO92Q06390 306 aa2.49□□□□□ -2.01
UBP15YMR304W RSA1Q08932 381 aa2.49□□□□□ -2.01
UBP15YMR304W TUF1P02992 437 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W SES1P07284 462 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W PEP5P12868 1029 aa2.48□□□□□ -2.01
UBP15YMR304W LCB1P25045 558 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W ADY2P25613 283 aa2.48□□□□□ -2.01
UBP15YMR304W PGM1P33401 570 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W TEF4P36008 412 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W IRS4P36115 615 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W DYS1P38791 387 aa2.48□□□□□ -2.01
UBP15YMR304W PRM9P39551 298 aa2.48□□□□□ -2.01
UBP15YMR304W YTP1P53584 459 aa2.48□□□□□ -2.01
UBP15YMR304W MTQ1P53944 314 aa2.48□□□□□ -2.01
UBP15YMR304W TFB2Q02939 513 aa2.48□□□□□ -2.01
UBP15YMR304W BUL2Q03758 920 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W YDR239CQ03780 787 aa2.48□□□□□ -2.01
UBP15YMR304W PLP1Q04004 230 aa2.48□□□□□ -2.01
UBP15YMR304W SEC10Q06245 871 aa2.48□□□□□ -2.01
UBP15YMR304W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
UBP15YMR304W NOP12Q08208 459 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W DBP10Q12389 995 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W YHR213W-AQ8TGT4 77 aa2.48□□□□□ -2.01
UBP15YMR304W DDP1Q99321 188 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W HIP1P06775 603 aa2.48□□□□□ -2.01
UBP15YMR304W YML002WP0CF17 737 aa2.48□□□□□ -2.01
UBP15YMR304W INO1P11986 533 aa2.48□□□□□ -2.01
UBP15YMR304W CYC8P14922 966 aa2.48□□□□□ -2.01
UBP15YMR304W SPB1P25582 841 aaPredicted RBP2.48□□□□□ -2.01
UBP15YMR304W PWP2P25635 923 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W COQ2P32378 372 aa2.48□□□□□ -2.01
UBP15YMR304W SSE2P32590 693 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W PTR2P32901 601 aa2.48□□□□□ -2.01
UBP15YMR304W AFR1P33304 620 aa2.48□□□□□ -2.01
UBP15YMR304W YKL069WP36088 180 aa2.48□□□□□ -2.01
UBP15YMR304W TDP1P38319 544 aa2.48□□□□□ -2.01
UBP15YMR304W PCI8P40512 444 aa2.48□□□□□ -2.01
UBP15YMR304W FAF1P40546 346 aaPredicted RBP2.48□□□□□ -2.01
UBP15YMR304W MAF1P41910 395 aa2.48□□□□□ -2.01
UBP15YMR304W ACF4P47129 309 aa2.48□□□□□ -2.01
UBP15YMR304W AZR1P50080 613 aa2.48□□□□□ -2.01
UBP15YMR304W FOL1P53848 824 aa2.48□□□□□ -2.01
UBP15YMR304W YDR109CQ04585 715 aa2.48□□□□□ -2.01
UBP15YMR304W YOL107WQ12239 342 aa2.48□□□□□ -2.01
UBP15YMR304W TUB3P09734 445 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W YMR085WP0CF18 432 aa2.48□□□□□ -2.01
UBP15YMR304W KGD1P20967 1014 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W RNR1P21524 888 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W PHA2P32452 334 aa2.48□□□□□ -2.01
UBP15YMR304W KAP122P32767 1081 aa2.48□□□□□ -2.01
UBP15YMR304W PEX6P33760 1030 aa2.48□□□□□ -2.01
UBP15YMR304W AVT5P38176 459 aa2.48□□□□□ -2.01
UBP15YMR304W COS111P38308 924 aa2.48□□□□□ -2.01
UBP15YMR304W SPL2P38839 148 aa2.48□□□□□ -2.01
UBP15YMR304W RTT105P40063 208 aa2.48□□□□□ -2.01
UBP15YMR304W SPO22P40511 975 aa2.48□□□□□ -2.01
UBP15YMR304W PRM10P42946 383 aa2.48□□□□□ -2.01
UBP15YMR304W BNA6P43619 295 aa2.48□□□□□ -2.01
UBP15YMR304W SGM1P47166 707 aa2.48□□□□□ -2.01
UBP15YMR304W EFM5P53200 248 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W YGR067CP53243 804 aa2.48□□□□□ -2.01
UBP15YMR304W TIF35Q04067 274 aaKnown RBP2.48□□□□□ -2.01
UBP15YMR304W SPC2Q04969 178 aa2.48□□□□□ -2.01
UBP15YMR304W GMC2Q06201 188 aa2.48□□□□□ -2.01
UBP15YMR304W DXO1Q06349 442 aa2.48□□□□□ -2.01
UBP15YMR304W AVO1Q08236 1176 aa2.48□□□□□ -2.01
UBP15YMR304W MSH5Q12175 901 aa2.48□□□□□ -2.01
UBP15YMR304W YFL068WP0CX99 160 aa2.47□□□□□ -2.01
UBP15YMR304W YLL066W-AP0CY00 160 aa2.47□□□□□ -2.01
UBP15YMR304W YLL067W-AP0CY01 160 aa2.47□□□□□ -2.01
UBP15YMR304W PFK1P16861 987 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms