RNA–Protein interactions for RNA: YMR139W

RIM11, Transcript of Protein kinase, yeast

Gene RIM11, Length 1,113 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM11	YMR139W	PMR1	P13586	950 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	POL3	P15436	1097 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	SPO16	P17122	198 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
RIM11	YMR139W	PTP1	P25044	335 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	DAL2	P25335	343 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	SBA1	P28707	216 aa	Known RBP	3.75	□□□□□ -1.81
RIM11	YMR139W	DBF4	P32325	704 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	NGG1	P32494	702 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	YBL055C	P34220	418 aa	Predicted RBP	3.75	□□□□□ -1.81
RIM11	YMR139W	SHP1	P34223	423 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	MCR1	P36060	302 aa	Known RBP	3.75	□□□□□ -1.81
RIM11	YMR139W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
RIM11	YMR139W	VHC1	P38329	1120 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	MSG5	P38590	489 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	YEL020C	P39994	560 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	FMP52	P40008	231 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	INA22	P40576	216 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	HUL5	P53119	910 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	ASI2	P53895	289 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	SMX3	P54999	86 aa	Predicted RBP	3.75	□□□□□ -1.81
RIM11	YMR139W	ADA2	Q02336	434 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	ATG16	Q03818	150 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	YDR222W	Q04925	415 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	TAF9	Q05027	157 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	UBX5	Q06682	500 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	TAF10	Q12030	206 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	NCA2	Q12374	616 aa		3.75	□□□□□ -1.81
RIM11	YMR139W	TY1B-A	O13527	1196 aa	Known RBP	3.74	□□□□□ -1.81
RIM11	YMR139W	RPS3	P05750	240 aa	Known RBP	3.74	□□□□□ -1.81
RIM11	YMR139W	SRV2	P17555	526 aa	Known RBP	3.74	□□□□□ -1.81
RIM11	YMR139W	RNR1	P21524	888 aa	Known RBP	3.74	□□□□□ -1.81
RIM11	YMR139W	ARG1	P22768	420 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	YUR1	P26725	428 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	GPI10	P30777	616 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	COT1	P32798	439 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	RPC37	P36121	282 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	MRX3	P38172	270 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	YBR062C	P38239	180 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	PMC1	P38929	1173 aa	Predicted RBP	3.74	□□□□□ -1.81
RIM11	YMR139W	PZF1	P39933	429 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	ASG1	P40467	964 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	CCT7	P42943	550 aa	Known RBP	3.74	□□□□□ -1.81
RIM11	YMR139W	CPR7	P47103	393 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	HSH155	P49955	971 aa	Known RBP	3.74	□□□□□ -1.81
RIM11	YMR139W	SHR3	Q02774	210 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	YML119W	Q03208	357 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	PPM1	Q04081	328 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	UFO1	Q04511	668 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	FAR8	Q05040	523 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	ASM4	Q05166	528 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	ISA1	Q07821	250 aa	Predicted RBP	3.74	□□□□□ -1.81
RIM11	YMR139W	TAF3	Q12297	353 aa		3.74	□□□□□ -1.81
RIM11	YMR139W	YLR278C	Q05854	1341 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	RPN13	O13563	156 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	ILV2	P07342	687 aa	Known RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	ARD1	P07347	238 aa	Predicted RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	YML002W	P0CF17	737 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	PMS1	P14242	873 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	HEM15	P16622	393 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	CDC42	P19073	191 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	GAL11	P19659	1081 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	SFL1	P20134	766 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	IME1	P21190	360 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	AGP1	P25376	633 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	PER1	P25625	357 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	PDB1	P32473	366 aa	Known RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	NIP1	P32497	812 aa	Known RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	CBF2	P32504	956 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	SWI3	P32591	825 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	CSG2	P35206	410 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	OCT1	P35999	772 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	YKL069W	P36088	180 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	YKR018C	P36114	725 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	VBA5	P36172	582 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	CCL1	P37366	393 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
RIM11	YMR139W	YMR134W	P40207	237 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	TDA10	P42938	290 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	PHO86	P46956	311 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	TMA22	P47089	198 aa	Predicted RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	ASN1	P49089	572 aa	Known RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	ZIP2	P53061	704 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	RTT102	P53330	157 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	NOG2	P53742	486 aa	Known RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	SQS1	P53866	767 aa	Known RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	RPA49	Q01080	415 aa	Predicted RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	CEF1	Q03654	590 aa	Predicted RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	ERV41	Q04651	352 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	IWR1	Q07532	353 aa	Predicted RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	CMS1	Q07897	291 aa	Known RBP	3.73	□□□□□ -1.81
RIM11	YMR139W	SMC5	Q08204	1093 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	IES4	Q08561	116 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	AI5_BETA	Q9ZZX0	354 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	UBR2	Q07963	1872 aa		3.73	□□□□□ -1.81
RIM11	YMR139W	RAD10	P06838	210 aa		3.72	□□□□□ -1.81
RIM11	YMR139W	ADE3	P07245	946 aa	Known RBP	3.72	□□□□□ -1.81
RIM11	YMR139W	LAT1	P12695	482 aa	Known RBP	3.72	□□□□□ -1.81
RIM11	YMR139W	CBF1	P17106	351 aa		3.72	□□□□□ -1.81
RIM11	YMR139W	TPS2	P31688	896 aa	Known RBP	3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms