RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C APL4Q12028 832 aa1.38□□□□□ -2.19
NUP188YML103C AVL9Q12500 764 aa1.38□□□□□ -2.19
NUP188YML103C SEC39Q12745 709 aa1.38□□□□□ -2.19
NUP188YML103C TUB2P02557 457 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C ILV2P07342 687 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C HEM1P09950 548 aaPredicted RBP1.37□□□□□ -2.19
NUP188YML103C GYP6P32806 458 aa1.37□□□□□ -2.19
NUP188YML103C RPC34P32910 317 aa1.37□□□□□ -2.19
NUP188YML103C REG2P38232 338 aa1.37□□□□□ -2.19
NUP188YML103C VID24P38263 362 aa1.37□□□□□ -2.19
NUP188YML103C VBA2P38358 474 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C BUL1P48524 976 aa1.37□□□□□ -2.19
NUP188YML103C DIA3P52290 468 aa1.37□□□□□ -2.19
NUP188YML103C COG1P53079 417 aa1.37□□□□□ -2.19
NUP188YML103C BUD17P53727 317 aa1.37□□□□□ -2.19
NUP188YML103C VTA1Q06263 330 aa1.37□□□□□ -2.19
NUP188YML103C YLR352WQ06479 807 aa1.37□□□□□ -2.19
NUP188YML103C VIP1Q06685 1146 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C YOL073CQ08232 322 aa1.37□□□□□ -2.19
NUP188YML103C FMP40Q08968 688 aaPredicted RBP1.37□□□□□ -2.19
NUP188YML103C LCB4Q12246 624 aa1.37□□□□□ -2.19
NUP188YML103C SUL2Q12325 893 aa1.37□□□□□ -2.19
NUP188YML103C HSP42Q12329 375 aa1.37□□□□□ -2.19
NUP188YML103C MDM20Q12387 796 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C RPL7AP05737 244 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C MRP2P10663 115 aaPredicted RBP1.37□□□□□ -2.19
NUP188YML103C ERG6P25087 383 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C MSS1P32559 526 aaPredicted RBP1.37□□□□□ -2.19
NUP188YML103C RPS0AP32905 252 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C NIP100P33420 868 aa1.37□□□□□ -2.19
NUP188YML103C THI80P35202 319 aa1.37□□□□□ -2.19
NUP188YML103C CBR1P38626 284 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C RTS1P38903 757 aa1.37□□□□□ -2.19
NUP188YML103C PFK26P40433 827 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C DUO1P53168 247 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C VPS75P53853 264 aa1.37□□□□□ -2.19
NUP188YML103C REG1Q00816 1014 aa1.37□□□□□ -2.19
NUP188YML103C RPS15Q01855 142 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C SYF1Q04048 859 aaPredicted RBP1.37□□□□□ -2.19
NUP188YML103C HOF1Q05080 669 aa1.37□□□□□ -2.19
NUP188YML103C RQC1Q05468 723 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C RIX7Q07844 837 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C CDC45Q08032 650 aa1.37□□□□□ -2.19
NUP188YML103C RPL7BQ12213 244 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C CET1O13297 549 aaPredicted RBP1.37□□□□□ -2.19
NUP188YML103C APA1P16550 321 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C REC114P32841 428 aa1.37□□□□□ -2.19
NUP188YML103C YEL068CP39977 110 aa1.37□□□□□ -2.19
NUP188YML103C BUD16P39988 312 aa1.37□□□□□ -2.19
NUP188YML103C YNL195CP40168 261 aa1.37□□□□□ -2.19
NUP188YML103C NDE1P40215 560 aa1.37□□□□□ -2.19
NUP188YML103C YIL166CP40445 542 aa1.37□□□□□ -2.19
NUP188YML103C DPH1P40487 425 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C ALK1P43633 760 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C FMS1P50264 508 aa1.37□□□□□ -2.19
NUP188YML103C VTC3Q02725 835 aa1.37□□□□□ -2.19
NUP188YML103C CRF1Q04930 467 aa1.37□□□□□ -2.19
NUP188YML103C ORM2Q06144 216 aa1.37□□□□□ -2.19
NUP188YML103C YEH1Q07804 573 aa1.37□□□□□ -2.19
NUP188YML103C USV1Q12132 391 aa1.37□□□□□ -2.19
NUP188YML103C HSH49Q99181 213 aaPredicted RBP1.37□□□□□ -2.19
NUP188YML103C KRS1P15180 591 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C GUK1P15454 187 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C RPA135P22138 1203 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C SAN1P22470 610 aa1.37□□□□□ -2.19
NUP188YML103C NTR2P36118 322 aaPredicted RBP1.37□□□□□ -2.19
NUP188YML103C IFA38P38286 347 aa1.37□□□□□ -2.19
NUP188YML103C YBR225WP38321 900 aa1.37□□□□□ -2.19
NUP188YML103C MET28P40573 187 aa1.37□□□□□ -2.19
NUP188YML103C IME4P41833 600 aa1.37□□□□□ -2.19
NUP188YML103C UPF3P48412 387 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C DIP5P53388 608 aa1.37□□□□□ -2.19
NUP188YML103C YMR178WQ03219 274 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C ARP9Q05123 467 aa1.37□□□□□ -2.19
NUP188YML103C ESC8Q08119 714 aa1.37□□□□□ -2.19
NUP188YML103C RIM20Q12033 661 aa1.37□□□□□ -2.19
NUP188YML103C LEU9Q12166 604 aaKnown RBP1.37□□□□□ -2.19
NUP188YML103C BI2P03873 423 aa1.36□□□□□ -2.19
NUP188YML103C ILS1P09436 1072 aaKnown RBP1.36□□□□□ -2.19
NUP188YML103C KIN3P22209 435 aa1.36□□□□□ -2.19
NUP188YML103C GAC1P28006 793 aa1.36□□□□□ -2.19
NUP188YML103C PUP2P32379 260 aa1.36□□□□□ -2.19
NUP188YML103C ALY1P36117 915 aa1.36□□□□□ -2.19
NUP188YML103C KTR3P38130 404 aaPredicted RBP1.36□□□□□ -2.19
NUP188YML103C UBS1P38290 277 aa1.36□□□□□ -2.19
NUP188YML103C ERC1P38767 581 aa1.36□□□□□ -2.19
NUP188YML103C PCL5P38794 229 aa1.36□□□□□ -2.19
NUP188YML103C ARB1P40024 610 aaKnown RBP1.36□□□□□ -2.19
NUP188YML103C RGI2P40188 164 aa1.36□□□□□ -2.19
NUP188YML103C BUD27P43573 796 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
NUP188YML103C MSY1P48527 492 aa1.36□□□□□ -2.19
NUP188YML103C GLO1P50107 326 aa1.36□□□□□ -2.19
NUP188YML103C OCA1P50946 238 aaPredicted RBP1.36□□□□□ -2.19
NUP188YML103C YGR079WP53249 370 aa1.36□□□□□ -2.19
NUP188YML103C SNF12P53628 566 aa1.36□□□□□ -2.19
NUP188YML103C MAK10Q02197 733 aa1.36□□□□□ -2.19
NUP188YML103C SWF1Q04629 336 aa1.36□□□□□ -2.19
NUP188YML103C MFB1Q04922 465 aa1.36□□□□□ -2.19
NUP188YML103C PSK2Q08217 1101 aa1.36□□□□□ -2.19
NUP188YML103C PUS9Q12069 462 aa1.36□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms