RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT3	YLR097C	MCM10	P32354	571 aa		4.9	□□□□□ -1.63
HRT3	YLR097C	ORC2	P32833	620 aa		4.9	□□□□□ -1.63
HRT3	YLR097C	TFC3	P34111	1160 aa		4.9	□□□□□ -1.63
HRT3	YLR097C	ATF1	P40353	525 aa		4.9	□□□□□ -1.63
HRT3	YLR097C	CBK1	P53894	756 aa		4.9	□□□□□ -1.63
HRT3	YLR097C	SVL3	Q03088	825 aa	Known RBP	4.9	□□□□□ -1.63
HRT3	YLR097C	LEA1	Q08963	238 aa	Predicted RBP	4.9	□□□□□ -1.63
HRT3	YLR097C	NUS1	Q12063	375 aa		4.9	□□□□□ -1.63
HRT3	YLR097C	NBP2	Q12163	236 aa		4.9	□□□□□ -1.63
HRT3	YLR097C	FTH1	P38310	465 aa		4.89	□□□□□ -1.63
HRT3	YLR097C	PHM8	P40025	321 aa		4.89	□□□□□ -1.63
HRT3	YLR097C	PFK26	P40433	827 aa	Known RBP	4.89	□□□□□ -1.63
HRT3	YLR097C	VPS4	P52917	437 aa		4.89	□□□□□ -1.63
HRT3	YLR097C	MEP3	P53390	489 aa		4.89	□□□□□ -1.63
HRT3	YLR097C	ATP23	P53722	227 aa		4.89	□□□□□ -1.63
HRT3	YLR097C	REG1	Q00816	1014 aa		4.89	□□□□□ -1.63
HRT3	YLR097C	YPL071C	Q02864	156 aa		4.89	□□□□□ -1.63
HRT3	YLR097C	SNO4	Q04902	237 aa		4.89	□□□□□ -1.63
HRT3	YLR097C	COQ11	Q05892	277 aa		4.89	□□□□□ -1.63
HRT3	YLR097C	HSP33	Q08914	237 aa	Known RBP	4.89	□□□□□ -1.63
HRT3	YLR097C	HSP32	Q08992	237 aa		4.89	□□□□□ -1.63
HRT3	YLR097C	LYS21	Q12122	440 aa	Known RBP	4.89	□□□□□ -1.63
HRT3	YLR097C	YNL162W-A	Q3E7A8	72 aa		4.89	□□□□□ -1.63
HRT3	YLR097C	CET1	O13297	549 aa	Predicted RBP	4.88	□□□□□ -1.63
HRT3	YLR097C	MAK32	P23060	363 aa		4.88	□□□□□ -1.63
HRT3	YLR097C	ERG8	P24521	451 aa		4.88	□□□□□ -1.63
HRT3	YLR097C	CBF2	P32504	956 aa		4.88	□□□□□ -1.63
HRT3	YLR097C	UBP7	P40453	1071 aa		4.88	□□□□□ -1.63
HRT3	YLR097C	ASG1	P40467	964 aa		4.88	□□□□□ -1.63
HRT3	YLR097C	BPL1	P48445	690 aa	Predicted RBP	4.88	□□□□□ -1.63
HRT3	YLR097C	ADE16	P54113	591 aa	Known RBP	4.88	□□□□□ -1.63
HRT3	YLR097C	RCO1	Q04779	684 aa		4.88	□□□□□ -1.63
HRT3	YLR097C	TPO3	Q06451	622 aa		4.88	□□□□□ -1.63
HRT3	YLR097C	SWA2	Q06677	668 aa		4.88	□□□□□ -1.63
HRT3	YLR097C	VCX1	Q99385	411 aa		4.88	□□□□□ -1.63
HRT3	YLR097C	FUM1	P08417	488 aa	Known RBP	4.87	□□□□□ -1.63
HRT3	YLR097C	YSP3	P25036	478 aa		4.87	□□□□□ -1.63
HRT3	YLR097C	CDC15	P27636	974 aa		4.87	□□□□□ -1.63
HRT3	YLR097C	GSH1	P32477	678 aa		4.87	□□□□□ -1.63
HRT3	YLR097C	SRB5	P32585	307 aa		4.87	□□□□□ -1.63
HRT3	YLR097C	SWE1	P32944	819 aa		4.87	□□□□□ -1.63
HRT3	YLR097C	YLR111W	Q12528	110 aa		4.87	□□□□□ -1.63
HRT3	YLR097C	YOL087C	Q99247	1116 aa		4.87	□□□□□ -1.63
HRT3	YLR097C	PGK1	P00560	416 aa	Known RBP	4.86	□□□□□ -1.63
HRT3	YLR097C	ILS1	P09436	1072 aa	Known RBP	4.86	□□□□□ -1.63
HRT3	YLR097C	NUP1	P20676	1076 aa		4.86	□□□□□ -1.63
HRT3	YLR097C	APN1	P22936	367 aa		4.86	□□□□□ -1.63
HRT3	YLR097C	CHS3	P29465	1165 aa		4.86	□□□□□ -1.63
HRT3	YLR097C	IMD2	P38697	523 aa	Known RBP	4.86	□□□□□ -1.63
HRT3	YLR097C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
HRT3	YLR097C	PSD1	P39006	500 aa		4.86	□□□□□ -1.63
HRT3	YLR097C	IMD3	P50095	523 aa	Known RBP	4.86	□□□□□ -1.63
HRT3	YLR097C	FCP1	Q03254	732 aa		4.86	□□□□□ -1.63
HRT3	YLR097C	CRN1	Q06440	651 aa		4.86	□□□□□ -1.63
HRT3	YLR097C	THI3	Q07471	609 aa		4.86	□□□□□ -1.63
HRT3	YLR097C	RPB2	P08518	1224 aa	Known RBP	4.85	□□□□□ -1.63
HRT3	YLR097C	SUI3	P09064	285 aa	Known RBP	4.85	□□□□□ -1.63
HRT3	YLR097C	PCT1	P13259	424 aa		4.85	□□□□□ -1.63
HRT3	YLR097C	URE2	P23202	354 aa	Known RBP	4.85	□□□□□ -1.63
HRT3	YLR097C	MBR1	P23493	339 aa		4.85	□□□□□ -1.63
HRT3	YLR097C	GFD2	P25370	566 aa	Known RBP	4.85	□□□□□ -1.63
HRT3	YLR097C	MRP20	P32387	263 aa		4.85	□□□□□ -1.63
HRT3	YLR097C	YJR061W	P40355	935 aa		4.85	□□□□□ -1.63
HRT3	YLR097C	DPH1	P40487	425 aa	Known RBP	4.85	□□□□□ -1.63
HRT3	YLR097C	CIN1	P40987	1014 aa		4.85	□□□□□ -1.63
HRT3	YLR097C	LGE1	Q02796	332 aa	Known RBP	4.85	□□□□□ -1.63
HRT3	YLR097C	SNU56	Q03782	492 aa	Known RBP	4.85	□□□□□ -1.63
HRT3	YLR097C	THI7	Q05998	598 aa		4.85	□□□□□ -1.63
HRT3	YLR097C	MSS51	P32335	436 aa		4.84	□□□□□ -1.63
HRT3	YLR097C	LHS1	P36016	881 aa		4.84	□□□□□ -1.63
HRT3	YLR097C	MRX1	P40050	688 aa		4.84	□□□□□ -1.63
HRT3	YLR097C	MNT3	P40549	630 aa		4.84	□□□□□ -1.63
HRT3	YLR097C	IRC7	P43623	340 aa		4.84	□□□□□ -1.63
HRT3	YLR097C	NMD5	P46970	1048 aa		4.84	□□□□□ -1.63
HRT3	YLR097C	VPS72	Q03388	795 aa		4.84	□□□□□ -1.63
HRT3	YLR097C	SEG1	Q04279	960 aa		4.84	□□□□□ -1.63
HRT3	YLR097C	PSK2	Q08217	1101 aa		4.84	□□□□□ -1.63
HRT3	YLR097C	SKM1	Q12469	655 aa		4.84	□□□□□ -1.63
HRT3	YLR097C	SOF1	P33750	489 aa	Known RBP	4.83	□□□□□ -1.64
HRT3	YLR097C	NTR2	P36118	322 aa	Predicted RBP	4.83	□□□□□ -1.64
HRT3	YLR097C	AAP1	P37898	856 aa	Known RBP	4.83	□□□□□ -1.64
HRT3	YLR097C	SEC31	P38968	1273 aa	Known RBP	4.83	□□□□□ -1.64
HRT3	YLR097C	ERV46	P39727	415 aa		4.83	□□□□□ -1.64
HRT3	YLR097C	SNO3	P43544	222 aa		4.83	□□□□□ -1.64
HRT3	YLR097C	ORC5	P50874	479 aa		4.83	□□□□□ -1.64
HRT3	YLR097C	YPR003C	P53394	754 aa		4.83	□□□□□ -1.64
HRT3	YLR097C	BSC5	P53755	489 aa		4.83	□□□□□ -1.64
HRT3	YLR097C	MUB1	Q03162	620 aa		4.83	□□□□□ -1.64
HRT3	YLR097C	FRE7	Q12333	620 aa		4.83	□□□□□ -1.64
HRT3	YLR097C	YOR019W	Q99248	730 aa		4.83	□□□□□ -1.64
HRT3	YLR097C	MRP2	P10663	115 aa	Predicted RBP	4.82	□□□□□ -1.64
HRT3	YLR097C	SRP54	P20424	541 aa	Known RBP	4.82	□□□□□ -1.64
HRT3	YLR097C	KTR3	P38130	404 aa	Predicted RBP	4.82	□□□□□ -1.64
HRT3	YLR097C	SLZ1	P40167	298 aa		4.82	□□□□□ -1.64
HRT3	YLR097C	TMA108	P40462	946 aa		4.82	□□□□□ -1.64
HRT3	YLR097C	IME4	P41833	600 aa		4.82	□□□□□ -1.64
HRT3	YLR097C	SWP82	P43554	623 aa		4.82	□□□□□ -1.64
HRT3	YLR097C	ARC1	P46672	376 aa	Known RBP	4.82	□□□□□ -1.64
HRT3	YLR097C	SIP4	P46954	829 aa		4.82	□□□□□ -1.64
HRT3	YLR097C	IDP3	P53982	420 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 103.2 ms