RNA–Protein interactions for RNA: YKR097W

PCK1, Transcript of Phosphoenolpyruvate carboxykinase, yeast

Gene PCK1, Length 1,650 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCK1	YKR097W	VCX1	Q99385	411 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	RTC1	Q08281	1341 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	PCT1	P13259	424 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	ERG8	P24521	451 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	PTC6	P25646	442 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	GSH1	P32477	678 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
PCK1	YKR097W	MNT3	P40549	630 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	SIP4	P46954	829 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	UBX6	P47049	396 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	VPS4	P52917	437 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	YDR109C	Q04585	715 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	RCO1	Q04779	684 aa		3.17	□□□□□ -1.9
PCK1	YKR097W	SPN1	Q06505	410 aa	Predicted RBP	3.17	□□□□□ -1.9
PCK1	YKR097W	RDL1	Q12305	139 aa	Known RBP	3.17	□□□□□ -1.9
PCK1	YKR097W	YLR302C	O13544	120 aa		3.16	□□□□□ -1.9
PCK1	YKR097W	SRP54	P20424	541 aa	Known RBP	3.16	□□□□□ -1.9
PCK1	YKR097W	CHS3	P29465	1165 aa		3.16	□□□□□ -1.9
PCK1	YKR097W	MRP20	P32387	263 aa		3.16	□□□□□ -1.9
PCK1	YKR097W	HOT13	P36078	116 aa		3.16	□□□□□ -1.9
PCK1	YKR097W	APD1	P38281	316 aa		3.16	□□□□□ -1.9
PCK1	YKR097W	IMD2	P38697	523 aa	Known RBP	3.16	□□□□□ -1.9
PCK1	YKR097W	PHM8	P40025	321 aa		3.16	□□□□□ -1.9
PCK1	YKR097W	FMP10	P40098	244 aa		3.16	□□□□□ -1.9
PCK1	YKR097W	UBP7	P40453	1071 aa		3.16	□□□□□ -1.9
PCK1	YKR097W	IMD3	P50095	523 aa	Known RBP	3.16	□□□□□ -1.9
PCK1	YKR097W	YRB30	P53107	440 aa	Predicted RBP	3.16	□□□□□ -1.9
PCK1	YKR097W	REG1	Q00816	1014 aa		3.16	□□□□□ -1.9
PCK1	YKR097W	VPS72	Q03388	795 aa		3.16	□□□□□ -1.9
PCK1	YKR097W	COQ11	Q05892	277 aa		3.16	□□□□□ -1.9
PCK1	YKR097W	ERG27	Q12452	347 aa	Known RBP	3.16	□□□□□ -1.9
PCK1	YKR097W	SRB5	P32585	307 aa		3.15	□□□□□ -1.9
PCK1	YKR097W	PEX2	P32800	271 aa		3.15	□□□□□ -1.9
PCK1	YKR097W	MUD2	P36084	527 aa	Known RBP	3.15	□□□□□ -1.9
PCK1	YKR097W	ADE16	P54113	591 aa	Known RBP	3.15	□□□□□ -1.9
PCK1	YKR097W	TMA64	Q04600	565 aa	Known RBP	3.15	□□□□□ -1.9
PCK1	YKR097W	PSK2	Q08217	1101 aa		3.15	□□□□□ -1.9
PCK1	YKR097W	LEA1	Q08963	238 aa	Predicted RBP	3.15	□□□□□ -1.9
PCK1	YKR097W	LYS21	Q12122	440 aa	Known RBP	3.15	□□□□□ -1.9
PCK1	YKR097W	YNL162W-A	Q3E7A8	72 aa		3.15	□□□□□ -1.9
PCK1	YKR097W	CET1	O13297	549 aa	Predicted RBP	3.14	□□□□□ -1.91
PCK1	YKR097W	GFD2	P25370	566 aa	Known RBP	3.14	□□□□□ -1.91
PCK1	YKR097W	PFK26	P40433	827 aa	Known RBP	3.14	□□□□□ -1.91
PCK1	YKR097W	CIN1	P40987	1014 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	SWP82	P43554	623 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	PIL1	P53252	339 aa	Known RBP	3.14	□□□□□ -1.91
PCK1	YKR097W	DCP2	P53550	970 aa	Known RBP	3.14	□□□□□ -1.91
PCK1	YKR097W	AAT1	Q01802	451 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	YKU80	Q04437	629 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	CRN1	Q06440	651 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	BSP1	Q06604	576 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	SWA2	Q06677	668 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	NUS1	Q12063	375 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	NBP2	Q12163	236 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	YLR111W	Q12528	110 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	BI2	P03873	423 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	TFC3	P34111	1160 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	ESL2	P36168	1195 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	FTH1	P38310	465 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	ERV46	P39727	415 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	YJR061W	P40355	935 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	UPF3	P48412	387 aa	Known RBP	3.14	□□□□□ -1.91
PCK1	YKR097W	YPR003C	P53394	754 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	BSC5	P53755	489 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	MUB1	Q03162	620 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	RRI2	Q12348	645 aa		3.14	□□□□□ -1.91
PCK1	YKR097W	ILV2	P07342	687 aa	Known RBP	3.13	□□□□□ -1.91
PCK1	YKR097W	CDC16	P09798	840 aa		3.13	□□□□□ -1.91
PCK1	YKR097W	RPL19A	P0CX82	189 aa	Known RBP	3.13	□□□□□ -1.91
PCK1	YKR097W	RPL19B	P0CX83	189 aa	Predicted RBP	3.13	□□□□□ -1.91
PCK1	YKR097W	AAP1	P37898	856 aa	Known RBP	3.13	□□□□□ -1.91
PCK1	YKR097W	YEL068C	P39977	110 aa		3.13	□□□□□ -1.91
PCK1	YKR097W	NOP16	P40007	231 aa	Known RBP	3.13	□□□□□ -1.91
PCK1	YKR097W	SLZ1	P40167	298 aa		3.13	□□□□□ -1.91
PCK1	YKR097W	TMA108	P40462	946 aa		3.13	□□□□□ -1.91
PCK1	YKR097W	CDC1	P40986	491 aa		3.13	□□□□□ -1.91
PCK1	YKR097W	ARC1	P46672	376 aa	Known RBP	3.13	□□□□□ -1.91
PCK1	YKR097W	INN1	P53901	409 aa		3.13	□□□□□ -1.91
PCK1	YKR097W	GPN2	Q08726	347 aa	Predicted RBP	3.13	□□□□□ -1.91
PCK1	YKR097W	FRE7	Q12333	620 aa		3.13	□□□□□ -1.91
PCK1	YKR097W	YOR019W	Q99248	730 aa		3.13	□□□□□ -1.91
PCK1	YKR097W	HOM2	P13663	365 aa	Known RBP	3.12	□□□□□ -1.91
PCK1	YKR097W	MBR1	P23493	339 aa		3.12	□□□□□ -1.91
PCK1	YKR097W	IMP2'	P32351	346 aa		3.12	□□□□□ -1.91
PCK1	YKR097W	PAH1	P32567	862 aa		3.12	□□□□□ -1.91
PCK1	YKR097W	ALY1	P36117	915 aa		3.12	□□□□□ -1.91
PCK1	YKR097W	NTR2	P36118	322 aa	Predicted RBP	3.12	□□□□□ -1.91
PCK1	YKR097W	SEC31	P38968	1273 aa	Known RBP	3.12	□□□□□ -1.91
PCK1	YKR097W	SNM1	P40993	198 aa		3.12	□□□□□ -1.91
PCK1	YKR097W	IME4	P41833	600 aa		3.12	□□□□□ -1.91
PCK1	YKR097W	RPN11	P43588	306 aa	Known RBP	3.12	□□□□□ -1.91
PCK1	YKR097W	AAD10	P47182	288 aa		3.12	□□□□□ -1.91
PCK1	YKR097W	ATP23	P53722	227 aa		3.12	□□□□□ -1.91
PCK1	YKR097W	VIP1	Q06685	1146 aa	Known RBP	3.12	□□□□□ -1.91
PCK1	YKR097W	ERG11	P10614	530 aa		3.11	□□□□□ -1.91
PCK1	YKR097W	SAN1	P22470	610 aa		3.11	□□□□□ -1.91
PCK1	YKR097W	APN1	P22936	367 aa		3.11	□□□□□ -1.91
PCK1	YKR097W	UBP13	P38187	747 aa		3.11	□□□□□ -1.91
PCK1	YKR097W	ASG1	P40467	964 aa		3.11	□□□□□ -1.91
PCK1	YKR097W	NMD5	P46970	1048 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms