RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	YHR131C	P38835	850 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	PZF1	P39933	429 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	BUD16	P39988	312 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	SLZ1	P40167	298 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	YDL183C	P48569	320 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	ASE1	P50275	885 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	SPO1	P53541	631 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	YNR068C	P53754	272 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	INN1	P53901	409 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	ALF1	P53904	254 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	ARG5,6	Q01217	863 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	REC102	Q02721	264 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	YPL108W	Q02872	168 aa	Predicted RBP	4.57	□□□□□ -1.68
TFA1	YKL028W	MUB1	Q03162	620 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	NGL2	Q03264	515 aa	Known RBP	4.57	□□□□□ -1.68
TFA1	YKL028W	HMO1	Q03973	246 aa	Known RBP	4.57	□□□□□ -1.68
TFA1	YKL028W	MUS81	Q04149	632 aa	Predicted RBP	4.57	□□□□□ -1.68
TFA1	YKL028W	GAD1	Q04792	585 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	TMA16	Q08687	178 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	PUS9	Q12069	462 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	LYS21	Q12122	440 aa	Known RBP	4.57	□□□□□ -1.68
TFA1	YKL028W	PSY3	Q12318	242 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	ISN1	Q99312	450 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	ERG20	P08524	352 aa	Known RBP	4.56	□□□□□ -1.68
TFA1	YKL028W	ADE2	P21264	571 aa	Known RBP	4.56	□□□□□ -1.68
TFA1	YKL028W	APN1	P22936	367 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	APL1	P27351	700 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	ERV1	P27882	189 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	PAP1	P29468	568 aa	Known RBP	4.56	□□□□□ -1.68
TFA1	YKL028W	NIP1	P32497	812 aa	Known RBP	4.56	□□□□□ -1.68
TFA1	YKL028W	TRM2	P33753	639 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	KES1	P35844	434 aa	Known RBP	4.56	□□□□□ -1.68
TFA1	YKL028W	RFC5	P38251	354 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	PFA3	P42836	336 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	FET5	P43561	622 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	PRP31	P49704	494 aa	Predicted RBP	4.56	□□□□□ -1.68
TFA1	YKL028W	SHE10	P53075	577 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	YGR066C	P53242	292 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	PRO2	P54885	456 aa	Known RBP	4.56	□□□□□ -1.68
TFA1	YKL028W	MSC2	Q03455	724 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	MMR1	Q06324	491 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	THI22	Q06490	572 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	MCM21	Q06675	368 aa		4.56	□□□□□ -1.68
TFA1	YKL028W	LUC7	Q07508	261 aa	Predicted RBP	4.56	□□□□□ -1.68
TFA1	YKL028W	APL5	Q08951	932 aa	Known RBP	4.56	□□□□□ -1.68
TFA1	YKL028W	ERG27	Q12452	347 aa	Known RBP	4.56	□□□□□ -1.68
TFA1	YKL028W	YMR084W	A2P2R3	262 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	CTT1	P06115	562 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	YML002W	P0CF17	737 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	LAT1	P12695	482 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	CAF20	P12962	161 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	OM45	P16547	393 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	SWC3	P31376	625 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	GCD7	P32502	381 aa	Predicted RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	SSE1	P32589	693 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	KTR3	P38130	404 aa	Predicted RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	YHR054C	P38780	354 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	YHR097C	P38809	366 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	SFB3	P38810	929 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	MTG2	P38860	518 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	JHD1	P40034	492 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	YNL195C	P40168	261 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	MNP1	P53163	194 aa	Predicted RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	TAM41	P53230	385 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	EFR3	Q03653	782 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	ARX1	Q03862	593 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	SIZ1	Q04195	904 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	ROY1	Q04847	553 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	YLR456W	Q06199	204 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	PHO92	Q06390	306 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	YEH1	Q07804	573 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	RPN5	Q12250	445 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	RIB2	Q12362	591 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	SPE4	Q12455	300 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	AFI1	Q99222	893 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	KIN2	P13186	1147 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	PHO84	P25297	587 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	SUR1	P33300	382 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	LOT5	P34234	306 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	AUR1	P36107	401 aa	Predicted RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	ADH5	P38113	351 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	PCH2	P38126	564 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	OSW5	P40219	148 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	VMA13	P41807	478 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	MSE1	P48525	536 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	SHE4	P51534	789 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	ROT1	Q03691	256 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	DUS4	Q06063	367 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	SPH1	Q06160	661 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	APC5	Q08683	685 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	BMS1	Q08965	1183 aa	Known RBP	4.55	□□□□□ -1.68
TFA1	YKL028W	AIM41	Q12032	185 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	MDY2	Q12285	212 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	YPT6	Q99260	215 aa		4.55	□□□□□ -1.68
TFA1	YKL028W	KIN82	P25341	720 aa		4.54	□□□□□ -1.68
TFA1	YKL028W	SYN8	P31377	255 aa		4.54	□□□□□ -1.68
TFA1	YKL028W	APT2	P36973	181 aa		4.54	□□□□□ -1.68
TFA1	YKL028W	MAL33	P38157	468 aa		4.54	□□□□□ -1.68
TFA1	YKL028W	STB5	P38699	743 aa		4.54	□□□□□ -1.68
TFA1	YKL028W	OTU2	P38747	307 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms