RNA–Protein interactions for RNA: YJR093C

FIP1, Transcript of Subunit of cleavage polyadenylation factor (CPF), yeast

Gene FIP1, Length 984 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIP1	YJR093C	TMA64	Q04600	565 aa	Known RBP	4.28	□□□□□ -1.72
FIP1	YJR093C	ORM2	Q06144	216 aa		4.28	□□□□□ -1.72
FIP1	YJR093C	TMA16	Q08687	178 aa		4.28	□□□□□ -1.72
FIP1	YJR093C	RVB2	Q12464	471 aa	Known RBP	4.28	□□□□□ -1.72
FIP1	YJR093C	YLR111W	Q12528	110 aa		4.28	□□□□□ -1.72
FIP1	YJR093C	RTC1	Q08281	1341 aa		4.27	□□□□□ -1.73
FIP1	YJR093C	RFA2	P26754	273 aa	Known RBP	4.27	□□□□□ -1.73
FIP1	YJR093C	GSY2	P27472	705 aa		4.27	□□□□□ -1.73
FIP1	YJR093C	IMD2	P38697	523 aa	Known RBP	4.27	□□□□□ -1.73
FIP1	YJR093C	FMP10	P40098	244 aa		4.27	□□□□□ -1.73
FIP1	YJR093C	STB2	P46679	850 aa		4.27	□□□□□ -1.73
FIP1	YJR093C	NMD5	P46970	1048 aa		4.27	□□□□□ -1.73
FIP1	YJR093C	NET1	P47035	1189 aa		4.27	□□□□□ -1.73
FIP1	YJR093C	IMD3	P50095	523 aa	Known RBP	4.27	□□□□□ -1.73
FIP1	YJR093C	COG2	P53271	262 aa		4.27	□□□□□ -1.73
FIP1	YJR093C	BSP1	Q06604	576 aa		4.27	□□□□□ -1.73
FIP1	YJR093C	CIR2	Q08822	631 aa		4.27	□□□□□ -1.73
FIP1	YJR093C	COX1	P00401	534 aa		4.26	□□□□□ -1.73
FIP1	YJR093C	KGD2	P19262	463 aa	Predicted RBP	4.26	□□□□□ -1.73
FIP1	YJR093C	CBF2	P32504	956 aa		4.26	□□□□□ -1.73
FIP1	YJR093C	SIP1	P32578	815 aa		4.26	□□□□□ -1.73
FIP1	YJR093C	NUP120	P35729	1037 aa		4.26	□□□□□ -1.73
FIP1	YJR093C	APD1	P38281	316 aa		4.26	□□□□□ -1.73
FIP1	YJR093C	YEL068C	P39977	110 aa		4.26	□□□□□ -1.73
FIP1	YJR093C	LAS21	P40367	830 aa		4.26	□□□□□ -1.73
FIP1	YJR093C	RIC1	P40395	1056 aa		4.26	□□□□□ -1.73
FIP1	YJR093C	RSC9	Q03124	581 aa		4.26	□□□□□ -1.73
FIP1	YJR093C	GTB1	Q04924	702 aa		4.26	□□□□□ -1.73
FIP1	YJR093C	YLR302C	O13544	120 aa		4.25	□□□□□ -1.73
FIP1	YJR093C	SAN1	P22470	610 aa		4.25	□□□□□ -1.73
FIP1	YJR093C	URE2	P23202	354 aa	Known RBP	4.25	□□□□□ -1.73
FIP1	YJR093C	ERG8	P24521	451 aa		4.25	□□□□□ -1.73
FIP1	YJR093C	MRP20	P32387	263 aa		4.25	□□□□□ -1.73
FIP1	YJR093C	IST3	P40565	148 aa	Predicted RBP	4.25	□□□□□ -1.73
FIP1	YJR093C	YNR061C	P53747	219 aa		4.25	□□□□□ -1.73
FIP1	YJR093C	SWT1	Q12104	458 aa		4.25	□□□□□ -1.73
FIP1	YJR093C	BI2	P03873	423 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	FUM1	P08417	488 aa	Known RBP	4.24	□□□□□ -1.73
FIP1	YJR093C	YMR085W	P0CF18	432 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	YSP3	P25036	478 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	LRE1	P25579	583 aa	Known RBP	4.24	□□□□□ -1.73
FIP1	YJR093C	RPF2	P36160	344 aa	Known RBP	4.24	□□□□□ -1.73
FIP1	YJR093C	FUN12	P39730	1002 aa	Known RBP	4.24	□□□□□ -1.73
FIP1	YJR093C	LTP1	P40347	161 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	YIL161W	P40449	235 aa	Known RBP	4.24	□□□□□ -1.73
FIP1	YJR093C	ULP2	P40537	1034 aa	Predicted RBP	4.24	□□□□□ -1.73
FIP1	YJR093C	LYS14	P40971	790 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	ASE1	P50275	885 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	YPL071C	Q02864	156 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	PLM2	Q04383	521 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	COG4	Q06096	861 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	TPO3	Q06451	622 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	SPN1	Q06505	410 aa	Predicted RBP	4.24	□□□□□ -1.73
FIP1	YJR093C	RGT2	Q12300	763 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	VCX1	Q99385	411 aa		4.24	□□□□□ -1.73
FIP1	YJR093C	SES1	P07284	462 aa	Known RBP	4.23	□□□□□ -1.73
FIP1	YJR093C	MAK32	P23060	363 aa		4.23	□□□□□ -1.73
FIP1	YJR093C	VBA2	P38358	474 aa	Known RBP	4.23	□□□□□ -1.73
FIP1	YJR093C	ERP2	P39704	215 aa		4.23	□□□□□ -1.73
FIP1	YJR093C	IRC3	Q06683	689 aa		4.23	□□□□□ -1.73
FIP1	YJR093C	VIP1	Q06685	1146 aa	Known RBP	4.23	□□□□□ -1.73
FIP1	YJR093C	PSK2	Q08217	1101 aa		4.23	□□□□□ -1.73
FIP1	YJR093C	YOR389W	Q08912	624 aa		4.23	□□□□□ -1.73
FIP1	YJR093C	RRI2	Q12348	645 aa		4.23	□□□□□ -1.73
FIP1	YJR093C	RPB2	P08518	1224 aa	Known RBP	4.22	□□□□□ -1.73
FIP1	YJR093C	CDC16	P09798	840 aa		4.22	□□□□□ -1.73
FIP1	YJR093C	AAC3	P18238	307 aa		4.22	□□□□□ -1.73
FIP1	YJR093C	LAC1	P28496	418 aa		4.22	□□□□□ -1.73
FIP1	YJR093C	PAH1	P32567	862 aa		4.22	□□□□□ -1.73
FIP1	YJR093C	HES1	P35843	434 aa		4.22	□□□□□ -1.73
FIP1	YJR093C	YJR061W	P40355	935 aa		4.22	□□□□□ -1.73
FIP1	YJR093C	PFK26	P40433	827 aa	Known RBP	4.22	□□□□□ -1.73
FIP1	YJR093C	TMA108	P40462	946 aa		4.22	□□□□□ -1.73
FIP1	YJR093C	UBX6	P47049	396 aa		4.22	□□□□□ -1.73
FIP1	YJR093C	UPF3	P48412	387 aa	Known RBP	4.22	□□□□□ -1.73
FIP1	YJR093C	MSY1	P48527	492 aa		4.22	□□□□□ -1.73
FIP1	YJR093C	ADE16	P54113	591 aa	Known RBP	4.22	□□□□□ -1.73
FIP1	YJR093C	STP1	Q00947	519 aa		4.22	□□□□□ -1.73
FIP1	YJR093C	YDR109C	Q04585	715 aa		4.22	□□□□□ -1.73
FIP1	YJR093C	SPO16	P17122	198 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	KES1	P35844	434 aa	Known RBP	4.21	□□□□□ -1.74
FIP1	YJR093C	UBP7	P40453	1071 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	CIN1	P40987	1014 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	PSA1	P41940	361 aa	Known RBP	4.21	□□□□□ -1.74
FIP1	YJR093C	SNO3	P43544	222 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	SIP4	P46954	829 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	VPS4	P52917	437 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	IDP3	P53982	420 aa	Known RBP	4.21	□□□□□ -1.74
FIP1	YJR093C	RCO1	Q04779	684 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	RAD34	Q06665	692 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	ATG23	Q06671	453 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	ENT4	Q07872	247 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	ENT1	Q12518	454 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	YOR019W	Q99248	730 aa		4.21	□□□□□ -1.74
FIP1	YJR093C	PCT1	P13259	424 aa		4.2	□□□□□ -1.74
FIP1	YJR093C	ALY1	P36117	915 aa		4.2	□□□□□ -1.74
FIP1	YJR093C	FTH1	P38310	465 aa		4.2	□□□□□ -1.74
FIP1	YJR093C	DJP1	P40564	432 aa		4.2	□□□□□ -1.74
FIP1	YJR093C	CIR1	P42940	261 aa		4.2	□□□□□ -1.74
FIP1	YJR093C	IRC7	P43623	340 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 110.8 ms