RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W LAS21P40367 830 aa1.9□□□□□ -2.11
PFD1YJL179W YJL107CP42947 387 aa1.9□□□□□ -2.11
PFD1YJL179W BUD27P43573 796 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
PFD1YJL179W YPT11P48559 417 aa1.9□□□□□ -2.11
PFD1YJL179W ZDS2P54786 942 aa1.9□□□□□ -2.11
PFD1YJL179W RMT2Q03305 412 aa1.9□□□□□ -2.11
PFD1YJL179W GUD1Q07729 489 aa1.9□□□□□ -2.11
PFD1YJL179W CTI6Q08923 506 aa1.9□□□□□ -2.11
PFD1YJL179W PFA4Q12006 378 aa1.9□□□□□ -2.11
PFD1YJL179W NYV1Q12255 253 aa1.9□□□□□ -2.11
PFD1YJL179W RVB2Q12464 471 aaKnown RBP1.9□□□□□ -2.11
PFD1YJL179W RRI1Q12468 440 aa1.9□□□□□ -2.11
PFD1YJL179W Q0010Q9ZZX9 128 aa1.9□□□□□ -2.11
PFD1YJL179W EDE1P34216 1381 aa1.89□□□□□ -2.11
PFD1YJL179W CBP3P21560 335 aa1.89□□□□□ -2.11
PFD1YJL179W GSH1P32477 678 aa1.89□□□□□ -2.11
PFD1YJL179W DSS4P32601 143 aa1.89□□□□□ -2.11
PFD1YJL179W SER1P33330 395 aaKnown RBP1.89□□□□□ -2.11
PFD1YJL179W MET13P53128 600 aa1.89□□□□□ -2.11
PFD1YJL179W YGL082WP53155 381 aa1.89□□□□□ -2.11
PFD1YJL179W APJ1P53940 528 aa1.89□□□□□ -2.11
PFD1YJL179W SND1Q04007 877 aa1.89□□□□□ -2.11
PFD1YJL179W CDC45Q08032 650 aa1.89□□□□□ -2.11
PFD1YJL179W YOL057WQ08225 711 aa1.89□□□□□ -2.11
PFD1YJL179W YLR125WQ12138 136 aa1.89□□□□□ -2.11
PFD1YJL179W BUG1Q12191 341 aa1.89□□□□□ -2.11
PFD1YJL179W RRP43P25359 394 aaPredicted RBP1.88□□□□□ -2.11
PFD1YJL179W PLC1P32383 869 aa1.88□□□□□ -2.11
PFD1YJL179W SDH8P38345 138 aa1.88□□□□□ -2.11
PFD1YJL179W FUN12P39730 1002 aaKnown RBP1.88□□□□□ -2.11
PFD1YJL179W MGS1P40151 587 aa1.88□□□□□ -2.11
PFD1YJL179W UBP7P40453 1071 aa1.88□□□□□ -2.11
PFD1YJL179W BUD6P41697 788 aa1.88□□□□□ -2.11
PFD1YJL179W YFR016CP43597 1233 aaKnown RBP1.88□□□□□ -2.11
PFD1YJL179W YJR008WP47085 338 aa1.88□□□□□ -2.11
PFD1YJL179W EAF6P47128 113 aa1.88□□□□□ -2.11
PFD1YJL179W COG2P53271 262 aa1.88□□□□□ -2.11
PFD1YJL179W MDG1P53885 366 aa1.88□□□□□ -2.11
PFD1YJL179W VPS64Q03944 604 aa1.88□□□□□ -2.11
PFD1YJL179W RIX7Q07844 837 aaKnown RBP1.88□□□□□ -2.11
PFD1YJL179W TLG2Q08144 397 aa1.88□□□□□ -2.11
PFD1YJL179W SSP2Q08646 371 aa1.88□□□□□ -2.11
PFD1YJL179W LCB4Q12246 624 aa1.88□□□□□ -2.11
PFD1YJL179W APM4Q99186 491 aa1.88□□□□□ -2.11
PFD1YJL179W SWI1P09547 1314 aa1.88□□□□□ -2.11
PFD1YJL179W LYS2P07702 1392 aa1.87□□□□□ -2.11
PFD1YJL179W LPD1P09624 499 aaKnown RBP1.87□□□□□ -2.11
PFD1YJL179W MRP7P12687 371 aa1.87□□□□□ -2.11
PFD1YJL179W DAL5P15365 543 aa1.87□□□□□ -2.11
PFD1YJL179W BET2P20133 325 aa1.87□□□□□ -2.11
PFD1YJL179W SWC3P31376 625 aa1.87□□□□□ -2.11
PFD1YJL179W RAD24P32641 659 aa1.87□□□□□ -2.11
PFD1YJL179W RRT2P38332 387 aa1.87□□□□□ -2.11
PFD1YJL179W BZZ1P38822 633 aa1.87□□□□□ -2.11
PFD1YJL179W ERV46P39727 415 aa1.87□□□□□ -2.11
PFD1YJL179W YRB30P53107 440 aaPredicted RBP1.87□□□□□ -2.11
PFD1YJL179W CUL3P53202 744 aa1.87□□□□□ -2.11
PFD1YJL179W DNM1P54861 757 aa1.87□□□□□ -2.11
PFD1YJL179W DIG1Q03063 452 aaKnown RBP1.87□□□□□ -2.11
PFD1YJL179W CSI1Q04368 295 aa1.87□□□□□ -2.11
PFD1YJL179W FMP42Q04991 504 aa1.87□□□□□ -2.11
PFD1YJL179W YLR352WQ06479 807 aa1.87□□□□□ -2.11
PFD1YJL179W VPS13Q07878 3144 aa1.86□□□□□ -2.11
PFD1YJL179W CDC26P14724 124 aa1.86□□□□□ -2.11
PFD1YJL179W SEC1P30619 724 aaKnown RBP1.86□□□□□ -2.11
PFD1YJL179W SMY1P32364 656 aaKnown RBP1.86□□□□□ -2.11
PFD1YJL179W NUP133P36161 1157 aa1.86□□□□□ -2.11
PFD1YJL179W MRPL4P36517 319 aa1.86□□□□□ -2.11
PFD1YJL179W PFF1P38244 976 aa1.86□□□□□ -2.11
PFD1YJL179W YHR033WP38690 423 aa1.86□□□□□ -2.11
PFD1YJL179W ARN1P38731 627 aa1.86□□□□□ -2.11
PFD1YJL179W TDA3P38758 523 aa1.86□□□□□ -2.11
PFD1YJL179W UBP12P39538 1254 aa1.86□□□□□ -2.11
PFD1YJL179W TPA1P40032 644 aaKnown RBP1.86□□□□□ -2.11
PFD1YJL179W NUP82P40368 713 aa1.86□□□□□ -2.11
PFD1YJL179W QRI7P43122 407 aa1.86□□□□□ -2.11
PFD1YJL179W CRZ1P53968 678 aa1.86□□□□□ -2.11
PFD1YJL179W ECM22Q05958 814 aaPredicted RBP1.86□□□□□ -2.11
PFD1YJL179W TIP41Q12199 356 aa1.86□□□□□ -2.11
PFD1YJL179W PMD1P32634 1753 aa1.85□□□□□ -2.11
PFD1YJL179W UTP10P42945 1769 aaKnown RBP1.85□□□□□ -2.11
PFD1YJL179W CTT1P06115 562 aa1.85□□□□□ -2.11
PFD1YJL179W RPS19AP07280 144 aaKnown RBP1.85□□□□□ -2.11
PFD1YJL179W RPS19BP07281 144 aaPredicted RBP1.85□□□□□ -2.11
PFD1YJL179W RPL42AP0CX27 106 aaKnown RBP1.85□□□□□ -2.11
PFD1YJL179W RPL42BP0CX28 106 aaKnown RBP1.85□□□□□ -2.11
PFD1YJL179W PHO8P11491 566 aa1.85□□□□□ -2.11
PFD1YJL179W KGD2P19262 463 aaPredicted RBP1.85□□□□□ -2.11
PFD1YJL179W AMD2P22580 549 aa1.85□□□□□ -2.11
PFD1YJL179W CPR3P25719 182 aa1.85□□□□□ -2.11
PFD1YJL179W SEC65P29478 273 aa1.85□□□□□ -2.11
PFD1YJL179W FRD1P32614 470 aaKnown RBP1.85□□□□□ -2.11
PFD1YJL179W NIC96P34077 839 aa1.85□□□□□ -2.11
PFD1YJL179W OAF3P36023 863 aa1.85□□□□□ -2.11
PFD1YJL179W MNN2P38069 597 aa1.85□□□□□ -2.11
PFD1YJL179W PBP2P38151 413 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
PFD1YJL179W EFM2P38347 419 aa1.85□□□□□ -2.11
PFD1YJL179W HXT6P39003 570 aaKnown RBP1.85□□□□□ -2.11
PFD1YJL179W HXT7P39004 570 aa1.85□□□□□ -2.11
PFD1YJL179W MKT1P40850 830 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms