RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	CTR1	P49573	406 aa		4.83	□□□□□ -1.64
SNL1	YIL016W	ATG23	Q06671	453 aa		4.83	□□□□□ -1.64
SNL1	YIL016W	YOL073C	Q08232	322 aa		4.83	□□□□□ -1.64
SNL1	YIL016W	AI5_ALPHA	Q9ZZX1	630 aa		4.83	□□□□□ -1.64
SNL1	YIL016W	YBR085C-A	O43137	85 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	CBS1	P14066	229 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	KAR3	P17119	729 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	AMD2	P22580	549 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	ROX1	P25042	368 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	ERG3	P32353	365 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	SRB5	P32585	307 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	SWI3	P32591	825 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	DEF1	P35732	738 aa	Known RBP	4.82	□□□□□ -1.64
SNL1	YIL016W	YKL050C	P35736	922 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	GMH1	P36125	273 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	SRO77	P38163	1010 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	PIH1	P38768	344 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	NDC80	P40460	691 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	UBX6	P47049	396 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	LYS4	P49367	693 aa	Predicted RBP	4.82	□□□□□ -1.64
SNL1	YIL016W	GLO1	P50107	326 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	YGL036W	P53185	909 aa	Predicted RBP	4.82	□□□□□ -1.64
SNL1	YIL016W	YDR109C	Q04585	715 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	GTB1	Q04924	702 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	YML053C	Q04978	212 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	YLR352W	Q06479	807 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	YDL242W	Q07746	117 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
SNL1	YIL016W	PGA3	Q12746	312 aa	Known RBP	4.82	□□□□□ -1.64
SNL1	YIL016W	SMC6	Q12749	1114 aa		4.82	□□□□□ -1.64
SNL1	YIL016W	RPC53	P25441	422 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	DBF4	P32325	704 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	LOT5	P34234	306 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	PEX5	P35056	612 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	RGI2	P40188	164 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	ARG2	P40360	574 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	SEC24	P40482	926 aa	Known RBP	4.81	□□□□□ -1.64
SNL1	YIL016W	AXL1	P40851	1208 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	PMT6	P42934	759 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	NPA3	P47122	385 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	YGR250C	P53316	781 aa	Known RBP	4.81	□□□□□ -1.64
SNL1	YIL016W	YNL092W	P53934	400 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	SXM1	Q04175	944 aa	Known RBP	4.81	□□□□□ -1.64
SNL1	YIL016W	SKG3	Q06315	1026 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	CRN1	Q06440	651 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	MRI1	Q06489	411 aa	Known RBP	4.81	□□□□□ -1.64
SNL1	YIL016W	YDL073W	Q07454	984 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	GET3	Q12154	354 aa	Known RBP	4.81	□□□□□ -1.64
SNL1	YIL016W	SFI1	Q12369	946 aa		4.81	□□□□□ -1.64
SNL1	YIL016W	AAC1	P04710	309 aa		4.8	□□□□□ -1.64
SNL1	YIL016W	PDX1	P16451	410 aa		4.8	□□□□□ -1.64
SNL1	YIL016W	OCA4	P25366	362 aa		4.8	□□□□□ -1.64
SNL1	YIL016W	CDC15	P27636	974 aa		4.8	□□□□□ -1.64
SNL1	YIL016W	GLG1	P36143	616 aa		4.8	□□□□□ -1.64
SNL1	YIL016W	RPF2	P36160	344 aa	Known RBP	4.8	□□□□□ -1.64
SNL1	YIL016W	REG2	P38232	338 aa		4.8	□□□□□ -1.64
SNL1	YIL016W	LSM5	P40089	93 aa	Known RBP	4.8	□□□□□ -1.64
SNL1	YIL016W	DOT5	P40553	215 aa		4.8	□□□□□ -1.64
SNL1	YIL016W	DJP1	P40564	432 aa		4.8	□□□□□ -1.64
SNL1	YIL016W	AVT1	P47082	602 aa		4.8	□□□□□ -1.64
SNL1	YIL016W	RTN2	Q12443	393 aa		4.8	□□□□□ -1.64
SNL1	YIL016W	OPI1	P21957	404 aa		4.79	□□□□□ -1.64
SNL1	YIL016W	LCB1	P25045	558 aa	Known RBP	4.79	□□□□□ -1.64
SNL1	YIL016W	MRPL9	P31334	269 aa		4.79	□□□□□ -1.64
SNL1	YIL016W	ORC2	P32833	620 aa		4.79	□□□□□ -1.64
SNL1	YIL016W	UBP13	P38187	747 aa		4.79	□□□□□ -1.64
SNL1	YIL016W	YEL057C	P39983	233 aa		4.79	□□□□□ -1.64
SNL1	YIL016W	MAM1	P40065	302 aa		4.79	□□□□□ -1.64
SNL1	YIL016W	SMX3	P54999	86 aa	Predicted RBP	4.79	□□□□□ -1.64
SNL1	YIL016W	ERO1	Q03103	563 aa		4.79	□□□□□ -1.64
SNL1	YIL016W	YML037C	Q03703	340 aa		4.79	□□□□□ -1.64
SNL1	YIL016W	YDR179W-A	Q03983	463 aa		4.79	□□□□□ -1.64
SNL1	YIL016W	SWA2	Q06677	668 aa		4.79	□□□□□ -1.64
SNL1	YIL016W	BMS1	Q08965	1183 aa	Known RBP	4.79	□□□□□ -1.64
SNL1	YIL016W	SPE4	Q12455	300 aa		4.79	□□□□□ -1.64
SNL1	YIL016W	RNR3	P21672	869 aa	Known RBP	4.78	□□□□□ -1.64
SNL1	YIL016W	YSP3	P25036	478 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	CDC60	P26637	1090 aa	Known RBP	4.78	□□□□□ -1.64
SNL1	YIL016W	CTS1	P29029	562 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	GDA1	P32621	518 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	SRP72	P38688	640 aa	Known RBP	4.78	□□□□□ -1.64
SNL1	YIL016W	UTP9	P38882	575 aa	Known RBP	4.78	□□□□□ -1.64
SNL1	YIL016W	AFG3	P39925	761 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	BUR6	P40096	142 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	LAS21	P40367	830 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	SWP82	P43554	623 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	MSY1	P48527	492 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	ADE16	P54113	591 aa	Known RBP	4.78	□□□□□ -1.64
SNL1	YIL016W	MUK1	Q02866	612 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	YEH1	Q07804	573 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	CRT10	Q08226	957 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	GPN2	Q08726	347 aa	Predicted RBP	4.78	□□□□□ -1.64
SNL1	YIL016W	MDM20	Q12387	796 aa	Known RBP	4.78	□□□□□ -1.64
SNL1	YIL016W	ZPS1	Q12512	249 aa		4.78	□□□□□ -1.64
SNL1	YIL016W	CHO2	P05374	869 aa	Known RBP	4.77	□□□□□ -1.65
SNL1	YIL016W	WHI2	P12611	486 aa		4.77	□□□□□ -1.65
SNL1	YIL016W	KGD2	P19262	463 aa	Predicted RBP	4.77	□□□□□ -1.65
SNL1	YIL016W	HES1	P35843	434 aa		4.77	□□□□□ -1.65
SNL1	YIL016W	YHL017W	P38745	532 aa		4.77	□□□□□ -1.65
SNL1	YIL016W	ERC1	P38767	581 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms