RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C MTG1Q03151 367 aaPredicted RBP13.37□□□□□ -0.27
SHU1YHL006C RLI1Q03195 608 aaKnown RBP13.37□□□□□ -0.27
SHU1YHL006C YMR160WQ03823 816 aa13.37□□□□□ -0.27
SHU1YHL006C TDA9Q04545 1251 aa13.37□□□□□ -0.27
SHU1YHL006C AVL9Q12500 764 aa13.37□□□□□ -0.27
SHU1YHL006C RPL1AP0CX43 217 aaKnown RBP13.36□□□□□ -0.27
SHU1YHL006C RPL1BP0CX44 217 aaKnown RBP13.36□□□□□ -0.27
SHU1YHL006C UBA1P22515 1024 aaKnown RBP13.36□□□□□ -0.27
SHU1YHL006C YBR259WP38338 688 aa13.36□□□□□ -0.27
SHU1YHL006C SRP72P38688 640 aaKnown RBP13.36□□□□□ -0.27
SHU1YHL006C TIM17P39515 158 aa13.36□□□□□ -0.27
SHU1YHL006C SLX8P40072 274 aa13.36□□□□□ -0.27
SHU1YHL006C APT1P49435 187 aaKnown RBP13.36□□□□□ -0.27
SHU1YHL006C AIM41Q12032 185 aa13.36□□□□□ -0.27
SHU1YHL006C RKM5Q12367 367 aa13.36□□□□□ -0.27
SHU1YHL006C RDS2P19541 446 aaKnown RBP13.35□□□□□ -0.27
SHU1YHL006C EMC1P25574 760 aa13.35□□□□□ -0.27
SHU1YHL006C PAP1P29468 568 aaKnown RBP13.35□□□□□ -0.27
SHU1YHL006C UBP14P38237 781 aaKnown RBP13.35□□□□□ -0.27
SHU1YHL006C MSG5P38590 489 aa13.35□□□□□ -0.27
SHU1YHL006C CAJ1P39101 391 aa13.35□□□□□ -0.27
SHU1YHL006C RPH1P39956 796 aa13.35□□□□□ -0.27
SHU1YHL006C YPR003CP53394 754 aa13.35□□□□□ -0.27
SHU1YHL006C YDR444WQ04093 687 aa13.35□□□□□ -0.27
SHU1YHL006C YML096WQ04489 525 aa13.35□□□□□ -0.27
SHU1YHL006C TFB4Q12004 338 aa13.35□□□□□ -0.27
SHU1YHL006C CSF1Q12150 2958 aa13.34□□□□□ -0.27
SHU1YHL006C INH1P01097 85 aa13.34□□□□□ -0.27
SHU1YHL006C CDC24P11433 854 aaPredicted RBP13.34□□□□□ -0.27
SHU1YHL006C YSP3P25036 478 aa13.34□□□□□ -0.27
SHU1YHL006C SNT1P25357 1226 aa13.34□□□□□ -0.27
SHU1YHL006C CWC22P53333 577 aaKnown RBP13.34□□□□□ -0.27
SHU1YHL006C FRE4P53746 719 aa13.34□□□□□ -0.27
SHU1YHL006C SLU7Q02775 382 aaKnown RBP13.34□□□□□ -0.27
SHU1YHL006C THI73Q07904 523 aa13.34□□□□□ -0.27
SHU1YHL006C LDB17Q12342 491 aa13.34□□□□□ -0.27
SHU1YHL006C FRT1Q99332 602 aa13.34□□□□□ -0.27
SHU1YHL006C IRA1P18963 3092 aa13.33□□□□□ -0.28
SHU1YHL006C TUB1P09733 447 aaKnown RBP13.33□□□□□ -0.28
SHU1YHL006C SBP1P10080 294 aaKnown RBP13.33□□□□□ -0.28
SHU1YHL006C GLN4P13188 809 aaKnown RBP13.33□□□□□ -0.28
SHU1YHL006C TSR4P25040 408 aa13.33□□□□□ -0.28
SHU1YHL006C SRP101P32916 621 aa13.33□□□□□ -0.28
SHU1YHL006C MMS21P38632 267 aa13.33□□□□□ -0.28
SHU1YHL006C RGI2P40188 164 aa13.33□□□□□ -0.28
SHU1YHL006C CTK3P46963 296 aaPredicted RBP13.33□□□□□ -0.28
SHU1YHL006C NAM8Q00539 523 aaKnown RBP13.33□□□□□ -0.28
SHU1YHL006C GSF2Q04697 403 aaKnown RBP13.33□□□□□ -0.28
SHU1YHL006C MCP2Q06567 569 aa13.33□□□□□ -0.28
SHU1YHL006C ALR1Q08269 859 aa13.33□□□□□ -0.28
SHU1YHL006C ZRT2Q12436 422 aa13.33□□□□□ -0.28
SHU1YHL006C GCD6P32501 712 aaKnown RBP13.32□□□□□ -0.28
SHU1YHL006C PBP2P38151 413 aaKnown RBP RIP-Chip data13.32□□□□□ -0.28not detected
SHU1YHL006C RPC17P47076 161 aa13.32□□□□□ -0.28
SHU1YHL006C POB3Q04636 552 aaKnown RBP13.32□□□□□ -0.28
SHU1YHL006C ARG7Q04728 441 aa13.32□□□□□ -0.28
SHU1YHL006C ESC2Q06340 456 aa13.32□□□□□ -0.28
SHU1YHL006C HBT1Q07653 1046 aaKnown RBP13.32□□□□□ -0.28
SHU1YHL006C YLL032CQ07834 825 aaKnown RBP RIP-Chip data13.32□□□□□ -0.28not detected
SHU1YHL006C ERR1P0CX10 437 aa13.31□□□□□ -0.28
SHU1YHL006C ERR2P0CX11 437 aa13.31□□□□□ -0.28
SHU1YHL006C PET123P17558 318 aa13.31□□□□□ -0.28
SHU1YHL006C RFA2P26754 273 aaKnown RBP13.31□□□□□ -0.28
SHU1YHL006C NDI1P32340 513 aa13.31□□□□□ -0.28
SHU1YHL006C SPS19P32573 292 aaKnown RBP13.31□□□□□ -0.28
SHU1YHL006C ERR3P42222 437 aa13.31□□□□□ -0.28
SHU1YHL006C SML1Q04964 104 aa13.31□□□□□ -0.28
SHU1YHL006C CIA1Q05583 330 aa13.31□□□□□ -0.28
SHU1YHL006C ECI1Q05871 280 aa13.31□□□□□ -0.28
SHU1YHL006C TRM8Q12009 286 aa13.31□□□□□ -0.28
SHU1YHL006C QCR6P00127 147 aa13.3□□□□□ -0.28
SHU1YHL006C APA1P16550 321 aaKnown RBP13.3□□□□□ -0.28
SHU1YHL006C GID7P25569 745 aa13.3□□□□□ -0.28
SHU1YHL006C MRPL9P31334 269 aa13.3□□□□□ -0.28
SHU1YHL006C HEM12P32347 362 aaPredicted RBP13.3□□□□□ -0.28
SHU1YHL006C IMP3P32899 183 aaPredicted RBP13.3□□□□□ -0.28
SHU1YHL006C CTF13P35203 478 aa13.3□□□□□ -0.28
SHU1YHL006C KES1P35844 434 aaKnown RBP13.3□□□□□ -0.28
SHU1YHL006C MUM2P38236 366 aa13.3□□□□□ -0.28
SHU1YHL006C IML3P38265 245 aa13.3□□□□□ -0.28
SHU1YHL006C GND1P38720 489 aaKnown RBP13.3□□□□□ -0.28
SHU1YHL006C SMF1P38925 575 aa13.3□□□□□ -0.28
SHU1YHL006C JSN1P47135 1091 aaKnown RBP RIP-Chip data13.3□□□□□ -0.28not detected
SHU1YHL006C NRM1P53718 249 aa13.3□□□□□ -0.28
SHU1YHL006C YLR456WQ06199 204 aa13.3□□□□□ -0.28
SHU1YHL006C VPS68Q12016 184 aa13.3□□□□□ -0.28
SHU1YHL006C SMF3Q12078 473 aaPredicted RBP13.3□□□□□ -0.28
SHU1YHL006C EPT1P22140 391 aa13.29□□□□□ -0.28
SHU1YHL006C LEU5P38702 357 aa13.29□□□□□ -0.28
SHU1YHL006C SMF2P38778 549 aa13.29□□□□□ -0.28
SHU1YHL006C STN1P38960 494 aa13.29□□□□□ -0.28
SHU1YHL006C SCC4P40090 624 aa13.29□□□□□ -0.28
SHU1YHL006C TAH11P47112 604 aa13.29□□□□□ -0.28
SHU1YHL006C HOS1Q12214 470 aa13.29□□□□□ -0.28
SHU1YHL006C YPR089WO13585 888 aa13.28□□□□□ -0.28
SHU1YHL006C IMA3P0CW40 589 aa13.28□□□□□ -0.28
SHU1YHL006C IMA4P0CW41 589 aa13.28□□□□□ -0.28
SHU1YHL006C PLC1P32383 869 aa13.28□□□□□ -0.28
SHU1YHL006C PCL5P38794 229 aa13.28□□□□□ -0.28
SHU1YHL006C CCT6P39079 546 aa13.28□□□□□ -0.28
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms