RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C TY2B-DR3Q07791 1770 aaKnown RBP3.26□□□□□ -1.89
MSH4YFL003C TY2B-OR1Q12113 1770 aa3.26□□□□□ -1.89
MSH4YFL003C TY2B-DR1Q12472 1770 aa3.26□□□□□ -1.89
MSH4YFL003C TY2B-OR2Q12501 1770 aa3.26□□□□□ -1.89
MSH4YFL003C PAN1P32521 1480 aa3.26□□□□□ -1.89
MSH4YFL003C YRF1-1P0CX20 1796 aa3.26□□□□□ -1.89
MSH4YFL003C YRF1-5P0CX21 1796 aa3.26□□□□□ -1.89
MSH4YFL003C YRF1-8P0CX22 1796 aa3.26□□□□□ -1.89
MSH4YFL003C AAC1P04710 309 aa3.25□□□□□ -1.89
MSH4YFL003C SEC12P11655 471 aa3.25□□□□□ -1.89
MSH4YFL003C SGF29P25554 259 aa3.25□□□□□ -1.89
MSH4YFL003C YJU2P28320 278 aaPredicted RBP3.25□□□□□ -1.89
MSH4YFL003C ERC1P38767 581 aa3.25□□□□□ -1.89
MSH4YFL003C PCL5P38794 229 aa3.25□□□□□ -1.89
MSH4YFL003C LSM5P40089 93 aaKnown RBP3.25□□□□□ -1.89
MSH4YFL003C NDC80P40460 691 aa3.25□□□□□ -1.89
MSH4YFL003C MSY1P48527 492 aa3.25□□□□□ -1.89
MSH4YFL003C STB4P50104 949 aa3.25□□□□□ -1.89
MSH4YFL003C RSC1P53236 928 aa3.25□□□□□ -1.89
MSH4YFL003C RIA1P53893 1110 aa3.25□□□□□ -1.89
MSH4YFL003C YDR179W-AQ03983 463 aa3.25□□□□□ -1.89
MSH4YFL003C SXM1Q04175 944 aaKnown RBP3.25□□□□□ -1.89
MSH4YFL003C SPN1Q06505 410 aaPredicted RBP3.25□□□□□ -1.89
MSH4YFL003C BMS1Q08965 1183 aaKnown RBP3.25□□□□□ -1.89
MSH4YFL003C SUT2Q12286 268 aa3.25□□□□□ -1.89
MSH4YFL003C YOR019WQ99248 730 aa3.25□□□□□ -1.89
MSH4YFL003C UFD4P33202 1483 aa3.25□□□□□ -1.89
MSH4YFL003C YPK9Q12697 1472 aa3.25□□□□□ -1.89
MSH4YFL003C CTT1P06115 562 aa3.25□□□□□ -1.89
MSH4YFL003C SPO16P17122 198 aa3.25□□□□□ -1.89
MSH4YFL003C RNR3P21672 869 aaKnown RBP3.25□□□□□ -1.89
MSH4YFL003C CMK1P27466 446 aaKnown RBP3.25□□□□□ -1.89
MSH4YFL003C ALY1P36117 915 aa3.25□□□□□ -1.89
MSH4YFL003C IST3P40565 148 aaPredicted RBP3.25□□□□□ -1.89
MSH4YFL003C PMT6P42934 759 aa3.25□□□□□ -1.89
MSH4YFL003C DSD1P53095 428 aa3.25□□□□□ -1.89
MSH4YFL003C YGR079WP53249 370 aa3.25□□□□□ -1.89
MSH4YFL003C RBG2P53295 368 aaKnown RBP3.25□□□□□ -1.89
MSH4YFL003C TY1B-HO13535 1793 aa3.24□□□□□ -1.89
MSH4YFL003C TY1B-DR5P0C2I2 1755 aa3.24□□□□□ -1.89
MSH4YFL003C TY1B-DR6P0C2I3 1755 aa3.24□□□□□ -1.89
MSH4YFL003C TY1B-LR2P0C2I5 1755 aa3.24□□□□□ -1.89
MSH4YFL003C TY1B-LR3P0C2I6 1755 aaKnown RBP3.24□□□□□ -1.89
MSH4YFL003C TY1B-PR1P0C2I9 1755 aaKnown RBP3.24□□□□□ -1.89
MSH4YFL003C TY1B-PR2P0C2J0 1756 aa3.24□□□□□ -1.89
MSH4YFL003C TY1B-PR3P0C2J1 1755 aaKnown RBP3.24□□□□□ -1.89
MSH4YFL003C TY1B-JR1P47098 1755 aa3.24□□□□□ -1.89
MSH4YFL003C TY1B-ML2Q03434 1755 aaKnown RBP3.24□□□□□ -1.89
MSH4YFL003C TY1B-ER1Q03612 1755 aa3.24□□□□□ -1.89
MSH4YFL003C TY1B-ML1Q04711 1755 aaKnown RBP3.24□□□□□ -1.89
MSH4YFL003C TY1B-GR2Q12269 1755 aa3.24□□□□□ -1.89
MSH4YFL003C TY1B-OLQ12273 1755 aa3.24□□□□□ -1.89
MSH4YFL003C TY1B-PLQ12414 1755 aaKnown RBP3.24□□□□□ -1.89
MSH4YFL003C ERG3P32353 365 aa3.24□□□□□ -1.89
MSH4YFL003C RPT3P33298 428 aaKnown RBP3.24□□□□□ -1.89
MSH4YFL003C YKL050CP35736 922 aa3.24□□□□□ -1.89
MSH4YFL003C CCT6P39079 546 aa3.24□□□□□ -1.89
MSH4YFL003C YJL206CP39529 758 aa3.24□□□□□ -1.89
MSH4YFL003C YEL057CP39983 233 aa3.24□□□□□ -1.89
MSH4YFL003C ARC1P46672 376 aaKnown RBP3.24□□□□□ -1.89
MSH4YFL003C AAD10P47182 288 aa3.24□□□□□ -1.89
MSH4YFL003C VPS75P53853 264 aa3.24□□□□□ -1.89
MSH4YFL003C MFM1Q02783 413 aa3.24□□□□□ -1.89
MSH4YFL003C YPL108WQ02872 168 aaPredicted RBP3.24□□□□□ -1.89
MSH4YFL003C MTG1Q03151 367 aaPredicted RBP3.24□□□□□ -1.89
MSH4YFL003C HIF1Q12373 385 aa3.24□□□□□ -1.89
MSH4YFL003C COX1P00401 534 aa3.24□□□□□ -1.89
MSH4YFL003C CHO2P05374 869 aaKnown RBP3.24□□□□□ -1.89
MSH4YFL003C GMH1P36125 273 aa3.24□□□□□ -1.89
MSH4YFL003C APL3P38065 1025 aa3.24□□□□□ -1.89
MSH4YFL003C YHL017WP38745 532 aa3.24□□□□□ -1.89
MSH4YFL003C ARG7Q04728 441 aa3.24□□□□□ -1.89
MSH4YFL003C MFB1Q04922 465 aa3.24□□□□□ -1.89
MSH4YFL003C YLR352WQ06479 807 aa3.24□□□□□ -1.89
MSH4YFL003C RIX7Q07844 837 aaKnown RBP3.24□□□□□ -1.89
MSH4YFL003C AI5_ALPHAQ9ZZX1 630 aa3.24□□□□□ -1.89
MSH4YFL003C RRP43P25359 394 aaPredicted RBP3.23□□□□□ -1.89
MSH4YFL003C CNS1P33313 385 aa3.23□□□□□ -1.89
MSH4YFL003C HES1P35843 434 aa3.23□□□□□ -1.89
MSH4YFL003C MNN2P38069 597 aa3.23□□□□□ -1.89
MSH4YFL003C SLZ1P40167 298 aa3.23□□□□□ -1.89
MSH4YFL003C CTR1P49573 406 aa3.23□□□□□ -1.89
MSH4YFL003C YLR287CQ05881 355 aa3.23□□□□□ -1.89
MSH4YFL003C RTT109Q07794 436 aa3.23□□□□□ -1.89
MSH4YFL003C SWT1Q12104 458 aa3.23□□□□□ -1.89
MSH4YFL003C YER175W-AQ8TGU4 54 aa3.23□□□□□ -1.89
MSH4YFL003C HSP82P02829 709 aaKnown RBP3.23□□□□□ -1.89
MSH4YFL003C SES1P07284 462 aaKnown RBP3.23□□□□□ -1.89
MSH4YFL003C NPL6P32832 435 aa3.23□□□□□ -1.89
MSH4YFL003C TRM2P33753 639 aa3.23□□□□□ -1.89
MSH4YFL003C PEX5P35056 612 aa3.23□□□□□ -1.89
MSH4YFL003C NOP4P37838 685 aaKnown RBP3.23□□□□□ -1.89
MSH4YFL003C TDP1P38319 544 aa3.23□□□□□ -1.89
MSH4YFL003C UME6P39001 836 aa3.23□□□□□ -1.89
MSH4YFL003C EXO1P39875 702 aa3.23□□□□□ -1.89
MSH4YFL003C JHD1P40034 492 aa3.23□□□□□ -1.89
MSH4YFL003C SDS3P40505 327 aa3.23□□□□□ -1.89
MSH4YFL003C TDA10P42938 290 aa3.23□□□□□ -1.89
MSH4YFL003C YFL015CP43578 164 aa3.23□□□□□ -1.89
MSH4YFL003C MRPL19P53875 158 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms