RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C VPS36Q06696 566 aa6.75□□□□□ -1.33
SHO1YER118C SGO1Q08490 590 aa6.75□□□□□ -1.33
SHO1YER118C ATG29Q12092 213 aa6.75□□□□□ -1.33
SHO1YER118C RUD3Q12234 484 aaKnown RBP6.75□□□□□ -1.33
SHO1YER118C ERG27Q12452 347 aaKnown RBP6.75□□□□□ -1.33
SHO1YER118C DAP2P18962 818 aa6.74□□□□□ -1.33
SHO1YER118C NAR1P23503 491 aaKnown RBP6.74□□□□□ -1.33
SHO1YER118C PHO91P27514 894 aa6.74□□□□□ -1.33
SHO1YER118C NTG1P31378 399 aa6.74□□□□□ -1.33
SHO1YER118C GCD7P32502 381 aaPredicted RBP6.74□□□□□ -1.33
SHO1YER118C AUR1P36107 401 aaPredicted RBP6.74□□□□□ -1.33
SHO1YER118C GPT2P36148 743 aa6.74□□□□□ -1.33
SHO1YER118C CCL1P37366 393 aa6.74□□□□□ -1.33
SHO1YER118C MAL33P38157 468 aa6.74□□□□□ -1.33
SHO1YER118C MET12P46151 657 aa6.74□□□□□ -1.33
SHO1YER118C YDL183CP48569 320 aa6.74□□□□□ -1.33
SHO1YER118C LCL3P53153 274 aa6.74□□□□□ -1.33
SHO1YER118C RIA1P53893 1110 aa6.74□□□□□ -1.33
SHO1YER118C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
SHO1YER118C YPL108WQ02872 168 aaPredicted RBP6.74□□□□□ -1.33
SHO1YER118C SOV1Q04748 898 aa6.74□□□□□ -1.33
SHO1YER118C RQC1Q05468 723 aaKnown RBP6.74□□□□□ -1.33
SHO1YER118C BUD7Q08754 746 aa6.74□□□□□ -1.33
SHO1YER118C YPT6Q99260 215 aa6.74□□□□□ -1.33
SHO1YER118C RNA1P11745 407 aaKnown RBP6.73□□□□□ -1.33
SHO1YER118C SEF1P34228 1148 aa6.73□□□□□ -1.33
SHO1YER118C OSH7P38755 437 aa6.73□□□□□ -1.33
SHO1YER118C CTF8P38877 133 aa6.73□□□□□ -1.33
SHO1YER118C SAK1P38990 1142 aa6.73□□□□□ -1.33
SHO1YER118C ZRG8P40021 1076 aa6.73□□□□□ -1.33
SHO1YER118C CHS6P40955 746 aa6.73□□□□□ -1.33
SHO1YER118C EPL1P43572 832 aa6.73□□□□□ -1.33
SHO1YER118C KAP120Q02932 1032 aa6.73□□□□□ -1.33
SHO1YER118C YML037CQ03703 340 aa6.73□□□□□ -1.33
SHO1YER118C MCP2Q06567 569 aa6.73□□□□□ -1.33
SHO1YER118C RAS1P01119 309 aa6.72□□□□□ -1.33
SHO1YER118C PUT4P15380 627 aa6.72□□□□□ -1.33
SHO1YER118C EST1P17214 699 aaPredicted RBP6.72□□□□□ -1.33
SHO1YER118C YUH1P35127 236 aa6.72□□□□□ -1.33
SHO1YER118C RRT2P38332 387 aa6.72□□□□□ -1.33
SHO1YER118C ERC1P38767 581 aa6.72□□□□□ -1.33
SHO1YER118C YHR078WP38799 552 aa6.72□□□□□ -1.33
SHO1YER118C SFB3P38810 929 aa6.72□□□□□ -1.33
SHO1YER118C WSS1P38838 269 aa6.72□□□□□ -1.33
SHO1YER118C CCT6P39079 546 aa6.72□□□□□ -1.33
SHO1YER118C YIL089WP40500 205 aa6.72□□□□□ -1.33
SHO1YER118C PKP1P40530 394 aa6.72□□□□□ -1.33
SHO1YER118C SGN1P40561 250 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
SHO1YER118C ALK1P43633 760 aaKnown RBP6.72□□□□□ -1.33
SHO1YER118C BIT61P47041 543 aa6.72□□□□□ -1.33
SHO1YER118C LYS4P49367 693 aaPredicted RBP6.72□□□□□ -1.33
SHO1YER118C CUE3P53137 624 aaKnown RBP6.72□□□□□ -1.33
SHO1YER118C CLU1Q03690 1277 aaKnown RBP6.72□□□□□ -1.33
SHO1YER118C CDA1Q06702 301 aa6.72□□□□□ -1.33
SHO1YER118C DCI1Q08558 271 aa6.72□□□□□ -1.33
SHO1YER118C PFK27Q12471 397 aaPredicted RBP6.72□□□□□ -1.33
SHO1YER118C YDR461C-AQ2V2P7 80 aa6.72□□□□□ -1.33
SHO1YER118C SOD2P00447 233 aa6.71□□□□□ -1.34
SHO1YER118C RPL6BP05739 176 aaKnown RBP6.71□□□□□ -1.34
SHO1YER118C ERG20P08524 352 aaKnown RBP6.71□□□□□ -1.34
SHO1YER118C MRPL25P23369 157 aa6.71□□□□□ -1.34
SHO1YER118C COS111P38308 924 aa6.71□□□□□ -1.34
SHO1YER118C YHL012WP38709 493 aa6.71□□□□□ -1.34
SHO1YER118C AIR1P40507 360 aaKnown RBP6.71□□□□□ -1.34
SHO1YER118C DLD2P46681 530 aaKnown RBP6.71□□□□□ -1.34
SHO1YER118C LYS5P50113 272 aa6.71□□□□□ -1.34
SHO1YER118C MLC1P53141 149 aa6.71□□□□□ -1.34
SHO1YER118C YBP2P53169 641 aa6.71□□□□□ -1.34
SHO1YER118C LSB1P53281 241 aa6.71□□□□□ -1.34
SHO1YER118C ARG5,6Q01217 863 aa6.71□□□□□ -1.34
SHO1YER118C RPL6AQ02326 176 aaKnown RBP6.71□□□□□ -1.34
SHO1YER118C YDR239CQ03780 787 aa6.71□□□□□ -1.34
SHO1YER118C KAP95Q06142 861 aaKnown RBP6.71□□□□□ -1.34
SHO1YER118C SWT1Q12104 458 aa6.71□□□□□ -1.34
SHO1YER118C LEU9Q12166 604 aaKnown RBP6.71□□□□□ -1.34
SHO1YER118C RPS4AP0CX35 261 aaKnown RBP6.7□□□□□ -1.34
SHO1YER118C RPS4BP0CX36 261 aaKnown RBP6.7□□□□□ -1.34
SHO1YER118C SAM35P14693 329 aa6.7□□□□□ -1.34
SHO1YER118C MER1P16523 270 aa6.7□□□□□ -1.34
SHO1YER118C ADE2P21264 571 aaKnown RBP6.7□□□□□ -1.34
SHO1YER118C GDT1P38301 280 aaPredicted RBP6.7□□□□□ -1.34
SHO1YER118C STB5P38699 743 aa6.7□□□□□ -1.34
SHO1YER118C PZF1P39933 429 aa6.7□□□□□ -1.34
SHO1YER118C YNL195CP40168 261 aa6.7□□□□□ -1.34
SHO1YER118C PFA3P42836 336 aa6.7□□□□□ -1.34
SHO1YER118C NCS6P53088 359 aa6.7□□□□□ -1.34
SHO1YER118C DSE4P53753 1117 aa6.7□□□□□ -1.34
SHO1YER118C RCM1P53972 490 aa6.7□□□□□ -1.34
SHO1YER118C EGD1Q02642 157 aaKnown RBP6.7□□□□□ -1.34
SHO1YER118C REC102Q02721 264 aa6.7□□□□□ -1.34
SHO1YER118C TAP42Q04372 366 aa6.7□□□□□ -1.34
SHO1YER118C ATG38Q05789 226 aaKnown RBP6.7□□□□□ -1.34
SHO1YER118C VPS38Q05919 439 aa6.7□□□□□ -1.34
SHO1YER118C STP3Q05937 343 aa6.7□□□□□ -1.34
SHO1YER118C YSH1Q06224 779 aaPredicted RBP6.7□□□□□ -1.34
SHO1YER118C YOR019WQ99248 730 aa6.7□□□□□ -1.34
SHO1YER118C TPK2P06245 380 aa6.69□□□□□ -1.34
SHO1YER118C GCD1P09032 578 aaPredicted RBP6.69□□□□□ -1.34
SHO1YER118C CLC1P17891 233 aa6.69□□□□□ -1.34
SHO1YER118C SNT1P25357 1226 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms