RNA–Protein interactions for RNA: YDL163W

YDL163W, Transcript of Dubious open reading frame, yeast

Gene YDL163W, Length 303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL163W	YDL163W	SWF1	Q04629	336 aa		3.46	□□□□□ -1.86
YDL163W	YDL163W	SWT1	Q12104	458 aa		3.46	□□□□□ -1.86
YDL163W	YDL163W	SPC72	P39723	622 aa		3.45	□□□□□ -1.86
YDL163W	YDL163W	ACA1	P39970	489 aa		3.45	□□□□□ -1.86
YDL163W	YDL163W	YIL161W	P40449	235 aa	Known RBP	3.45	□□□□□ -1.86
YDL163W	YDL163W	ZAP1	P47043	880 aa		3.45	□□□□□ -1.86
YDL163W	YDL163W	LSC1	P53598	329 aa	Known RBP	3.45	□□□□□ -1.86
YDL163W	YDL163W	RPL15B	P54780	204 aa	Predicted RBP	3.45	□□□□□ -1.86
YDL163W	YDL163W	NUP53	Q03790	475 aa		3.45	□□□□□ -1.86
YDL163W	YDL163W	MCH4	Q08268	501 aa		3.45	□□□□□ -1.86
YDL163W	YDL163W	CIR2	Q08822	631 aa		3.45	□□□□□ -1.86
YDL163W	YDL163W	MSM1	P22438	575 aa		3.44	□□□□□ -1.86
YDL163W	YDL163W	SWI4	P25302	1093 aa	Known RBP	3.44	□□□□□ -1.86
YDL163W	YDL163W	YUR1	P26725	428 aa		3.44	□□□□□ -1.86
YDL163W	YDL163W	PTH2	P34222	208 aa		3.44	□□□□□ -1.86
YDL163W	YDL163W	PUG1	P40100	303 aa		3.44	□□□□□ -1.86
YDL163W	YDL163W	STB2	P46679	850 aa		3.44	□□□□□ -1.86
YDL163W	YDL163W	VPS25	P47142	202 aa		3.44	□□□□□ -1.86
YDL163W	YDL163W	UBX4	P54730	416 aa		3.44	□□□□□ -1.86
YDL163W	YDL163W	MOT3	P54785	490 aa	Known RBP	3.44	□□□□□ -1.86
YDL163W	YDL163W	PIG1	Q06216	648 aa		3.44	□□□□□ -1.86
YDL163W	YDL163W	PFA4	Q12006	378 aa		3.44	□□□□□ -1.86
YDL163W	YDL163W	YLR049C	Q12110	428 aa		3.44	□□□□□ -1.86
YDL163W	YDL163W	YCP4	P25349	247 aa	Known RBP	3.43	□□□□□ -1.86
YDL163W	YDL163W	YCR006C	P25350	157 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	ATO2	P32907	282 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	MRX1	P40050	688 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	PSF2	P40359	213 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	UBP7	P40453	1071 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	CDC1	P40986	491 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	YPT11	P48559	417 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	YPR003C	P53394	754 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	YLR281C	Q05863	155 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	POS5	Q06892	414 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	YOL057W	Q08225	711 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	SRL1	Q08673	210 aa		3.43	□□□□□ -1.86
YDL163W	YDL163W	GAL4	P04386	881 aa		3.42	□□□□□ -1.86
YDL163W	YDL163W	NUC1	P08466	329 aa		3.42	□□□□□ -1.86
YDL163W	YDL163W	YML003W	P0CF16	290 aa		3.42	□□□□□ -1.86
YDL163W	YDL163W	NCP1	P16603	691 aa	Known RBP	3.42	□□□□□ -1.86
YDL163W	YDL163W	LHS1	P36016	881 aa		3.42	□□□□□ -1.86
YDL163W	YDL163W	ASE1	P50275	885 aa		3.42	□□□□□ -1.86
YDL163W	YDL163W	ADE16	P54113	591 aa	Known RBP	3.42	□□□□□ -1.86
YDL163W	YDL163W	MRPL13	Q02204	264 aa		3.42	□□□□□ -1.86
YDL163W	YDL163W	ECI1	Q05871	280 aa		3.42	□□□□□ -1.86
YDL163W	YDL163W	BLS1	Q06071	122 aa		3.42	□□□□□ -1.86
YDL163W	YDL163W	VAM6	Q07468	1049 aa		3.42	□□□□□ -1.86
YDL163W	YDL163W	GSH2	Q08220	491 aa		3.42	□□□□□ -1.86
YDL163W	YDL163W	BUD7	Q08754	746 aa		3.42	□□□□□ -1.86
YDL163W	YDL163W	ATP2	P00830	511 aa	Known RBP	3.41	□□□□□ -1.86
YDL163W	YDL163W	RFA2	P26754	273 aa	Known RBP	3.41	□□□□□ -1.86
YDL163W	YDL163W	CDC15	P27636	974 aa		3.41	□□□□□ -1.86
YDL163W	YDL163W	XRS2	P33301	854 aa		3.41	□□□□□ -1.86
YDL163W	YDL163W	TFC3	P34111	1160 aa		3.41	□□□□□ -1.86
YDL163W	YDL163W	LYS20	P48570	428 aa	Known RBP	3.41	□□□□□ -1.86
YDL163W	YDL163W	SCS3	P53012	380 aa		3.41	□□□□□ -1.86
YDL163W	YDL163W	TAM41	P53230	385 aa		3.41	□□□□□ -1.86
YDL163W	YDL163W	SNA4	Q07549	140 aa		3.41	□□□□□ -1.86
YDL163W	YDL163W	DSE3	Q08729	430 aa		3.41	□□□□□ -1.86
YDL163W	YDL163W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
YDL163W	YDL163W	YPT1	P01123	206 aa	Known RBP	3.4	□□□□□ -1.87
YDL163W	YDL163W	YCL049C	P25577	312 aa		3.4	□□□□□ -1.87
YDL163W	YDL163W	RAD16	P31244	790 aa		3.4	□□□□□ -1.87
YDL163W	YDL163W	SOF1	P33750	489 aa	Known RBP	3.4	□□□□□ -1.87
YDL163W	YDL163W	YBR138C	P38277	524 aa		3.4	□□□□□ -1.87
YDL163W	YDL163W	RPN11	P43588	306 aa	Known RBP	3.4	□□□□□ -1.87
YDL163W	YDL163W	CSL4	P53859	292 aa	Predicted RBP	3.4	□□□□□ -1.87
YDL163W	YDL163W	EAF7	P53911	425 aa	Known RBP	3.4	□□□□□ -1.87
YDL163W	YDL163W	CAC2	Q04199	468 aa		3.4	□□□□□ -1.87
YDL163W	YDL163W	YLR455W	Q06188	304 aa		3.4	□□□□□ -1.87
YDL163W	YDL163W	SWA2	Q06677	668 aa		3.4	□□□□□ -1.87
YDL163W	YDL163W	ERG27	Q12452	347 aa	Known RBP	3.4	□□□□□ -1.87
YDL163W	YDL163W	TPK1	P06244	397 aa		3.39	□□□□□ -1.87
YDL163W	YDL163W	PGI1	P12709	554 aa	Known RBP	3.39	□□□□□ -1.87
YDL163W	YDL163W	PCT1	P13259	424 aa		3.39	□□□□□ -1.87
YDL163W	YDL163W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.39	□□□□□ -1.87	not detected
YDL163W	YDL163W	AAP1	P37898	856 aa	Known RBP	3.39	□□□□□ -1.87
YDL163W	YDL163W	RKM3	P38222	552 aa		3.39	□□□□□ -1.87
YDL163W	YDL163W	VPS41	P38959	992 aa		3.39	□□□□□ -1.87
YDL163W	YDL163W	SEC31	P38968	1273 aa	Known RBP	3.39	□□□□□ -1.87
YDL163W	YDL163W	PCL6	P40038	420 aa		3.39	□□□□□ -1.87
YDL163W	YDL163W	ERR3	P42222	437 aa		3.39	□□□□□ -1.87
YDL163W	YDL163W	VMS1	Q04311	632 aa	Known RBP	3.39	□□□□□ -1.87
YDL163W	YDL163W	GRS2	Q06817	618 aa		3.39	□□□□□ -1.87
YDL163W	YDL163W	NEW1	Q08972	1196 aa	Known RBP	3.39	□□□□□ -1.87
YDL163W	YDL163W	MTF2	P10849	440 aa		3.38	□□□□□ -1.87
YDL163W	YDL163W	UBC1	P21734	215 aa	Known RBP	3.38	□□□□□ -1.87
YDL163W	YDL163W	YSP3	P25036	478 aa		3.38	□□□□□ -1.87
YDL163W	YDL163W	EXO84	P38261	753 aa		3.38	□□□□□ -1.87
YDL163W	YDL163W	GND1	P38720	489 aa	Known RBP	3.38	□□□□□ -1.87
YDL163W	YDL163W	UME6	P39001	836 aa		3.38	□□□□□ -1.87
YDL163W	YDL163W	IST3	P40565	148 aa	Predicted RBP	3.38	□□□□□ -1.87
YDL163W	YDL163W	SMK1	P41808	388 aa		3.38	□□□□□ -1.87
YDL163W	YDL163W	CRN1	Q06440	651 aa		3.38	□□□□□ -1.87
YDL163W	YDL163W	CSR1	Q06705	408 aa	Known RBP	3.38	□□□□□ -1.87
YDL163W	YDL163W	PSR2	Q07949	397 aa		3.38	□□□□□ -1.87
YDL163W	YDL163W	MLH2	Q07980	695 aa		3.38	□□□□□ -1.87
YDL163W	YDL163W	GPA1	P08539	472 aa		3.37	□□□□□ -1.87
YDL163W	YDL163W	SRB5	P32585	307 aa		3.37	□□□□□ -1.87
YDL163W	YDL163W	GEX2	P36173	615 aa		3.37	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms