RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	YFH7	P43591	353 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	YGL176C	P46945	554 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	BNA3	P47039	444 aa	Known RBP	5.86	□□□□□ -1.47
SUB2	YDL084W	UPF3	P48412	387 aa	Known RBP	5.86	□□□□□ -1.47
SUB2	YDL084W	GNP1	P48813	663 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	RPA14	P50106	137 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	AIM14	P53109	570 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	SNF12	P53628	566 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	YNL181W	P53878	407 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	MFM1	Q02783	413 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	RMT2	Q03305	412 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	HER2	Q03557	464 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	YMR155W	Q03795	547 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	GYL1	Q04322	720 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	SPO77	Q06134	477 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	TDA5	Q06417	326 aa	Known RBP	5.86	□□□□□ -1.47
SUB2	YDL084W	THI3	Q07471	609 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	NBA1	Q08229	501 aa	Known RBP	5.86	□□□□□ -1.47
SUB2	YDL084W	PDH1	Q12428	516 aa	Known RBP	5.86	□□□□□ -1.47
SUB2	YDL084W	YCL001W-B	Q96VH2	84 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	UFD4	P33202	1483 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	MMS22	Q06164	1454 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	SSM4	P40318	1319 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	COX6	P00427	148 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	KIN2	P13186	1147 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	POL30	P15873	258 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	AAC3	P18238	307 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	PRP9	P19736	530 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	RNR1	P21524	888 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	RAD57	P25301	460 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	CTR86	P25355	563 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	YCR101C	P25607	182 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	RPD3	P32561	433 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	FRD1	P32614	470 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	SRP101	P32916	621 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	CSE4	P36012	229 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	AAP1	P37898	856 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	AKL1	P38080	1108 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	ECM2	P38241	364 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	RFC5	P38251	354 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	YBR225W	P38321	900 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	RCK2	P38623	610 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	REV7	P38927	245 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	SOP4	P39543	234 aa	Predicted RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	LSM5	P40089	93 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	LCB2	P40970	561 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	IMD3	P50095	523 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	SAM37	P50110	327 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	NUT1	P53114	1132 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	NPY1	P53164	384 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	ECM23	Q02710	187 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	HED1	Q03937	162 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	GTB1	Q04924	702 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	DUS3	Q06053	668 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	YPR084W	Q06821	456 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	BDS1	Q08347	646 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	YPL272C	Q08984	517 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	HER1	Q12276	1246 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	SNU23	Q12368	194 aa	Predicted RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	GRX6	Q12438	231 aa		5.85	□□□□□ -1.47
SUB2	YDL084W	RRP12	Q12754	1228 aa	Known RBP	5.85	□□□□□ -1.47
SUB2	YDL084W	SSA3	P09435	649 aa	Known RBP	5.84	□□□□□ -1.47
SUB2	YDL084W	SAM1	P10659	382 aa	Known RBP	5.84	□□□□□ -1.47
SUB2	YDL084W	GCD2	P12754	651 aa	Predicted RBP	5.84	□□□□□ -1.47
SUB2	YDL084W	UNG1	P12887	359 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	KRS1	P15180	591 aa	Known RBP	5.84	□□□□□ -1.47
SUB2	YDL084W	AEP2	P22136	580 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	STE50	P25344	346 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	PHO91	P27514	894 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	GPI10	P30777	616 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	MET22	P32179	357 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	ATO2	P32907	282 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	MYO3	P36006	1272 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	DID4	P36108	232 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	MRPL7	P36519	292 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	HMT1	P38074	348 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	SSH1	P38353	490 aa	Known RBP	5.84	□□□□□ -1.47
SUB2	YDL084W	LNP1	P38878	278 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	YDR089W	P38966	869 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	PZF1	P39933	429 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	RTR1	P40084	226 aa	Predicted RBP	5.84	□□□□□ -1.47
SUB2	YDL084W	CCT5	P40413	562 aa	Known RBP	5.84	□□□□□ -1.47
SUB2	YDL084W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
SUB2	YDL084W	AIM24	P47127	394 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	IBA57	P47158	497 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	BRO1	P48582	844 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	MND1	P53102	219 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	TYW3	P53177	273 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	RRN9	P53437	365 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	RCF2	P53721	224 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	CAF120	P53836	1060 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	ATC1	Q04005	294 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	HFD1	Q04458	532 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	DFG5	Q05031	458 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	YPR109W	Q06104	294 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	LEU9	Q12166	604 aa	Known RBP	5.84	□□□□□ -1.47
SUB2	YDL084W	LDB17	Q12342	491 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	SKM1	Q12469	655 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	MDM12	Q92328	271 aa		5.84	□□□□□ -1.47
SUB2	YDL084W	MET5	P47169	1442 aa		5.84	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms