RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	AXL1	P40851	1208 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	ECL1	P48235	211 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	NGL3	Q03210	505 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	RCF1	Q03713	159 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	CIR2	Q08822	631 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	SWT1	Q12104	458 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	NMD4	Q12129	218 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	NOP58	Q12499	511 aa	Known RBP	4.57	□□□□□ -1.68
RTK1	YDL025C	USO1	P25386	1790 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	VTH1	P40438	1549 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	VTH2	P40890	1549 aa		4.57	□□□□□ -1.68
RTK1	YDL025C	SOD2	P00447	233 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	RPC53	P25441	422 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	ERG3	P32353	365 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	UTP9	P38882	575 aa	Known RBP	4.56	□□□□□ -1.68
RTK1	YDL025C	FLC2	P39719	783 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	YJL163C	P46996	555 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	AAD10	P47182	288 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	MCM6	P53091	1017 aa	Known RBP	4.56	□□□□□ -1.68
RTK1	YDL025C	MAK10	Q02197	733 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	PSK2	Q08217	1101 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	FRE5	Q08908	694 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	MLH3	Q12083	715 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	PDX1	P16451	410 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	ROX1	P25042	368 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	EFT1	P32324	842 aa	Known RBP	4.56	□□□□□ -1.68
RTK1	YDL025C	OMA1	P36163	345 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	YHR097C	P38809	366 aa	Known RBP	4.56	□□□□□ -1.68
RTK1	YDL025C	JHD1	P40034	492 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	MFM1	Q02783	413 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	MUB1	Q03162	620 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	YDL086W	Q07505	273 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	RTN2	Q12443	393 aa		4.56	□□□□□ -1.68
RTK1	YDL025C	PGA3	Q12746	312 aa	Known RBP	4.56	□□□□□ -1.68
RTK1	YDL025C	PDR12	Q02785	1511 aa		4.55	□□□□□ -1.68
RTK1	YDL025C	IQG1	Q12280	1495 aa		4.55	□□□□□ -1.68
RTK1	YDL025C	ABF1	P14164	731 aa		4.55	□□□□□ -1.68
RTK1	YDL025C	OCA4	P25366	362 aa		4.55	□□□□□ -1.68
RTK1	YDL025C	SDH8	P38345	138 aa		4.55	□□□□□ -1.68
RTK1	YDL025C	LSM5	P40089	93 aa	Known RBP	4.55	□□□□□ -1.68
RTK1	YDL025C	SLZ1	P40167	298 aa		4.55	□□□□□ -1.68
RTK1	YDL025C	YML6	P51998	286 aa		4.55	□□□□□ -1.68
RTK1	YDL025C	DIP5	P53388	608 aa		4.55	□□□□□ -1.68
RTK1	YDL025C	YSH1	Q06224	779 aa	Predicted RBP	4.55	□□□□□ -1.68
RTK1	YDL025C	RIX7	Q07844	837 aa	Known RBP	4.55	□□□□□ -1.68
RTK1	YDL025C	USV1	Q12132	391 aa		4.55	□□□□□ -1.68
RTK1	YDL025C	TRM13	Q12383	476 aa		4.55	□□□□□ -1.68
RTK1	YDL025C	YOR019W	Q99248	730 aa		4.55	□□□□□ -1.68
RTK1	YDL025C	CBS1	P14066	229 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	LCB1	P25045	558 aa	Known RBP	4.54	□□□□□ -1.68
RTK1	YDL025C	TOD6	P34219	525 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	MAL33	P38157	468 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	BUD16	P39988	312 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	FMP52	P40008	231 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	PIL1	P53252	339 aa	Known RBP	4.54	□□□□□ -1.68
RTK1	YDL025C	YGR250C	P53316	781 aa	Known RBP	4.54	□□□□□ -1.68
RTK1	YDL025C	INN1	P53901	409 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	NGL2	Q03264	515 aa	Known RBP	4.54	□□□□□ -1.68
RTK1	YDL025C	TCO89	Q08921	799 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	YER175W-A	Q8TGU4	54 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	SIR3	P06701	978 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	THR1	P17423	357 aa	Known RBP	4.54	□□□□□ -1.68
RTK1	YDL025C	PDE1	P22434	369 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	POL4	P25615	582 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	TOA1	P32773	286 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
RTK1	YDL025C	IME4	P41833	600 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	MNN10	P50108	393 aa	Known RBP	4.54	□□□□□ -1.68
RTK1	YDL025C	IMO32	P53219	342 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	FHN1	P53279	174 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	YGR151C	P53287	111 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	YNR061C	P53747	219 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	YPL216W	Q08964	1102 aa		4.54	□□□□□ -1.68
RTK1	YDL025C	BNR1	P40450	1375 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	HSP82	P02829	709 aa	Known RBP	4.53	□□□□□ -1.68
RTK1	YDL025C	GAS1	P22146	559 aa	Known RBP	4.53	□□□□□ -1.68
RTK1	YDL025C	ECM32	P32644	1121 aa	Known RBP	4.53	□□□□□ -1.68
RTK1	YDL025C	GEX2	P36173	615 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	SRO77	P38163	1010 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	REG2	P38232	338 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	APE4	P38821	490 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	ARO9	P38840	513 aa	Predicted RBP	4.53	□□□□□ -1.68
RTK1	YDL025C	YJL206C	P39529	758 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	THI6	P41835	540 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	GLO1	P50107	326 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	RIM8	P53179	542 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	NMA2	P53204	395 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	DAK1	P54838	584 aa	Known RBP	4.53	□□□□□ -1.68
RTK1	YDL025C	ATG23	Q06671	453 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	GET3	Q12154	354 aa	Known RBP	4.53	□□□□□ -1.68
RTK1	YDL025C	ISA2	Q12425	185 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	YBR255C-A	Q3E776	120 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	SMC4	Q12267	1418 aa		4.53	□□□□□ -1.68
RTK1	YDL025C	BUD3	P25558	1636 aa		4.52	□□□□□ -1.69
RTK1	YDL025C	YML003W	P0CF16	290 aa		4.52	□□□□□ -1.69
RTK1	YDL025C	KAR3	P17119	729 aa		4.52	□□□□□ -1.69
RTK1	YDL025C	STE11	P23561	717 aa		4.52	□□□□□ -1.69
RTK1	YDL025C	ERG4	P25340	473 aa		4.52	□□□□□ -1.69
RTK1	YDL025C	CDC15	P27636	974 aa		4.52	□□□□□ -1.69
RTK1	YDL025C	AUR1	P36107	401 aa	Predicted RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms