RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	AIM17	P23180	465 aa	Known RBP	4.13	□□□□□ -1.75
ATP16	YDL004W	YCP4	P25349	247 aa	Known RBP	4.13	□□□□□ -1.75
ATP16	YDL004W	YCR006C	P25350	157 aa		4.13	□□□□□ -1.75
ATP16	YDL004W	GND1	P38720	489 aa	Known RBP	4.13	□□□□□ -1.75
ATP16	YDL004W	ACA1	P39970	489 aa		4.13	□□□□□ -1.75
ATP16	YDL004W	MDV1	P47025	714 aa		4.13	□□□□□ -1.75
ATP16	YDL004W	YPT11	P48559	417 aa		4.13	□□□□□ -1.75
ATP16	YDL004W	ATX2	Q12067	313 aa		4.13	□□□□□ -1.75
ATP16	YDL004W	TOM71	P38825	639 aa	Known RBP	4.12	□□□□□ -1.75
ATP16	YDL004W	PSF2	P40359	213 aa		4.12	□□□□□ -1.75
ATP16	YDL004W	DJP1	P40564	432 aa		4.12	□□□□□ -1.75
ATP16	YDL004W	YJR008W	P47085	338 aa		4.12	□□□□□ -1.75
ATP16	YDL004W	LYS20	P48570	428 aa	Known RBP	4.12	□□□□□ -1.75
ATP16	YDL004W	YGL036W	P53185	909 aa	Predicted RBP	4.12	□□□□□ -1.75
ATP16	YDL004W	MCH4	Q08268	501 aa		4.12	□□□□□ -1.75
ATP16	YDL004W	YER145C-A	A0A023PYF4	145 aa		4.11	□□□□□ -1.75
ATP16	YDL004W	ATP2	P00830	511 aa	Known RBP	4.11	□□□□□ -1.75
ATP16	YDL004W	PCT1	P13259	424 aa		4.11	□□□□□ -1.75
ATP16	YDL004W	OCT1	P35999	772 aa		4.11	□□□□□ -1.75
ATP16	YDL004W	SCS3	P53012	380 aa		4.11	□□□□□ -1.75
ATP16	YDL004W	UBX4	P54730	416 aa		4.11	□□□□□ -1.75
ATP16	YDL004W	VTC3	Q02725	835 aa		4.11	□□□□□ -1.75
ATP16	YDL004W	ATG23	Q06671	453 aa		4.11	□□□□□ -1.75
ATP16	YDL004W	SNA4	Q07549	140 aa		4.11	□□□□□ -1.75
ATP16	YDL004W	SWT1	Q12104	458 aa		4.11	□□□□□ -1.75
ATP16	YDL004W	BAG7	Q12128	409 aa		4.11	□□□□□ -1.75
ATP16	YDL004W	YPT1	P01123	206 aa	Known RBP	4.1	□□□□□ -1.75
ATP16	YDL004W	NUC1	P08466	329 aa		4.1	□□□□□ -1.75
ATP16	YDL004W	MSM1	P22438	575 aa		4.1	□□□□□ -1.75
ATP16	YDL004W	YSP3	P25036	478 aa		4.1	□□□□□ -1.75
ATP16	YDL004W	LRE1	P25579	583 aa	Known RBP	4.1	□□□□□ -1.75
ATP16	YDL004W	PXL1	P36166	706 aa		4.1	□□□□□ -1.75
ATP16	YDL004W	EXO84	P38261	753 aa		4.1	□□□□□ -1.75
ATP16	YDL004W	YIL161W	P40449	235 aa	Known RBP	4.1	□□□□□ -1.75
ATP16	YDL004W	PAP2	P53632	584 aa	Known RBP	4.1	□□□□□ -1.75
ATP16	YDL004W	ARC35	P53731	342 aa	Known RBP	4.1	□□□□□ -1.75
ATP16	YDL004W	CIA1	Q05583	330 aa		4.1	□□□□□ -1.75
ATP16	YDL004W	VAM6	Q07468	1049 aa		4.1	□□□□□ -1.75
ATP16	YDL004W	COX17	Q12287	69 aa		4.1	□□□□□ -1.75
ATP16	YDL004W	PGI1	P12709	554 aa	Known RBP	4.09	□□□□□ -1.75
ATP16	YDL004W	ATO2	P32907	282 aa		4.09	□□□□□ -1.75
ATP16	YDL004W	NUP120	P35729	1037 aa		4.09	□□□□□ -1.75
ATP16	YDL004W	MRPL36	P36531	177 aa		4.09	□□□□□ -1.75
ATP16	YDL004W	ADE17	P38009	592 aa	Known RBP	4.09	□□□□□ -1.75
ATP16	YDL004W	TPA1	P40032	644 aa	Known RBP	4.09	□□□□□ -1.75
ATP16	YDL004W	ASG1	P40467	964 aa		4.09	□□□□□ -1.75
ATP16	YDL004W	TDA9	Q04545	1251 aa		4.09	□□□□□ -1.75
ATP16	YDL004W	SWA2	Q06677	668 aa		4.09	□□□□□ -1.75
ATP16	YDL004W	FRE3	Q08905	711 aa		4.09	□□□□□ -1.75
ATP16	YDL004W	PCD1	Q12524	340 aa		4.09	□□□□□ -1.75
ATP16	YDL004W	GPA1	P08539	472 aa		4.08	□□□□□ -1.76
ATP16	YDL004W	RPL42A	P0CX27	106 aa	Known RBP	4.08	□□□□□ -1.76
ATP16	YDL004W	RPL42B	P0CX28	106 aa	Known RBP	4.08	□□□□□ -1.76
ATP16	YDL004W	MRP2	P10663	115 aa	Predicted RBP	4.08	□□□□□ -1.76
ATP16	YDL004W	YCL049C	P25577	312 aa		4.08	□□□□□ -1.76
ATP16	YDL004W	UBP13	P38187	747 aa		4.08	□□□□□ -1.76
ATP16	YDL004W	VPS41	P38959	992 aa		4.08	□□□□□ -1.76
ATP16	YDL004W	BOP3	P53958	396 aa		4.08	□□□□□ -1.76
ATP16	YDL004W	PIG1	Q06216	648 aa		4.08	□□□□□ -1.76
ATP16	YDL004W	GSH2	Q08220	491 aa		4.08	□□□□□ -1.76
ATP16	YDL004W	YLR112W	Q12130	139 aa		4.08	□□□□□ -1.76
ATP16	YDL004W	UBX3	Q12229	455 aa		4.08	□□□□□ -1.76
ATP16	YDL004W	TPK1	P06244	397 aa		4.07	□□□□□ -1.76
ATP16	YDL004W	GEX2	P36173	615 aa		4.07	□□□□□ -1.76
ATP16	YDL004W	IFA38	P38286	347 aa		4.07	□□□□□ -1.76
ATP16	YDL004W	VPS25	P47142	202 aa		4.07	□□□□□ -1.76
ATP16	YDL004W	UBP8	P50102	471 aa		4.07	□□□□□ -1.76
ATP16	YDL004W	COG1	P53079	417 aa		4.07	□□□□□ -1.76
ATP16	YDL004W	MRPL13	Q02204	264 aa		4.07	□□□□□ -1.76
ATP16	YDL004W	BLS1	Q06071	122 aa		4.07	□□□□□ -1.76
ATP16	YDL004W	YLR049C	Q12110	428 aa		4.07	□□□□□ -1.76
ATP16	YDL004W	SPO16	P17122	198 aa		4.06	□□□□□ -1.76
ATP16	YDL004W	DBF20	P32328	564 aa		4.06	□□□□□ -1.76
ATP16	YDL004W	NPR3	P38742	1146 aa		4.06	□□□□□ -1.76
ATP16	YDL004W	PHM8	P40025	321 aa		4.06	□□□□□ -1.76
ATP16	YDL004W	DCP2	P53550	970 aa	Known RBP	4.06	□□□□□ -1.76
ATP16	YDL004W	LSC1	P53598	329 aa	Known RBP	4.06	□□□□□ -1.76
ATP16	YDL004W	YMR034C	Q05131	434 aa	Predicted RBP	4.06	□□□□□ -1.76
ATP16	YDL004W	CRN1	Q06440	651 aa		4.06	□□□□□ -1.76
ATP16	YDL004W	TMA16	Q08687	178 aa		4.06	□□□□□ -1.76
ATP16	YDL004W	DSE3	Q08729	430 aa		4.06	□□□□□ -1.76
ATP16	YDL004W	TY2A-LR1	P0C2J4	438 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	TY2A-F	P0CX61	438 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	TY2A-GR2	P0CX62	438 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	TY2A-C	P25383	438 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	EAF7	P53911	425 aa	Known RBP	4.05	□□□□□ -1.76
ATP16	YDL004W	PFA5	Q03289	374 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	IZH1	Q03419	316 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	TY2A-DR2	Q03483	438 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	YLR455W	Q06188	304 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	BUD7	Q08754	746 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	TY2A-B	Q12260	438 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	TY2A-OR2	Q12293	438 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	TY2A-DR1	Q12392	438 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	TY2A-OR1	Q12439	438 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	TY2A-DR3	Q99303	438 aa		4.05	□□□□□ -1.76
ATP16	YDL004W	SRP54	P20424	541 aa	Known RBP	4.04	□□□□□ -1.76
ATP16	YDL004W	UBC1	P21734	215 aa	Known RBP	4.04	□□□□□ -1.76
ATP16	YDL004W	YCR043C	P25361	127 aa		4.04	□□□□□ -1.76
ATP16	YDL004W	RAD16	P31244	790 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms