RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W MSE1P48525 536 aa2.3□□□□□ -2.04
SNC1YAL030W MSY1P48527 492 aa2.3□□□□□ -2.04
SNC1YAL030W CTR1P49573 406 aa2.3□□□□□ -2.04
SNC1YAL030W NMA2P53204 395 aa2.3□□□□□ -2.04
SNC1YAL030W COQ6P53318 479 aa2.3□□□□□ -2.04
SNC1YAL030W YAT1P80235 687 aa2.3□□□□□ -2.04
SNC1YAL030W RAD30Q04049 632 aa2.3□□□□□ -2.04
SNC1YAL030W GFD1Q04839 188 aaKnown RBP2.3□□□□□ -2.04
SNC1YAL030W UTP21Q06078 939 aaPredicted RBP2.3□□□□□ -2.04
SNC1YAL030W SKG3Q06315 1026 aa2.3□□□□□ -2.04
SNC1YAL030W HBT1Q07653 1046 aaKnown RBP2.3□□□□□ -2.04
SNC1YAL030W YDL242WQ07746 117 aa2.3□□□□□ -2.04
SNC1YAL030W CIR2Q08822 631 aa2.3□□□□□ -2.04
SNC1YAL030W YPL191CQ08930 360 aa2.3□□□□□ -2.04
SNC1YAL030W LCB4Q12246 624 aa2.3□□□□□ -2.04
SNC1YAL030W TAF3Q12297 353 aa2.3□□□□□ -2.04
SNC1YAL030W PGA3Q12746 312 aaKnown RBP2.3□□□□□ -2.04
SNC1YAL030W HSH49Q99181 213 aaPredicted RBP2.3□□□□□ -2.04
SNC1YAL030W CET1O13297 549 aaPredicted RBP2.29□□□□□ -2.04
SNC1YAL030W YBR085C-AO43137 85 aa2.29□□□□□ -2.04
SNC1YAL030W CPA2P03965 1118 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W YPK1P12688 680 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W FUR1P18562 216 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W YCK1P23291 538 aa2.29□□□□□ -2.04
SNC1YAL030W ERG3P32353 365 aa2.29□□□□□ -2.04
SNC1YAL030W SIP1P32578 815 aa2.29□□□□□ -2.04
SNC1YAL030W PEX5P35056 612 aa2.29□□□□□ -2.04
SNC1YAL030W KES1P35844 434 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W AAP1P37898 856 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W AGP2P38090 596 aa2.29□□□□□ -2.04
SNC1YAL030W MUM2P38236 366 aa2.29□□□□□ -2.04
SNC1YAL030W CBR1P38626 284 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W PCL5P38794 229 aa2.29□□□□□ -2.04
SNC1YAL030W RTS1P38903 757 aa2.29□□□□□ -2.04
SNC1YAL030W FUN12P39730 1002 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W UBP5P39944 805 aa2.29□□□□□ -2.04
SNC1YAL030W TPA1P40032 644 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W LSM5P40089 93 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W OPT1P40897 799 aa2.29□□□□□ -2.04
SNC1YAL030W IME4P41833 600 aa2.29□□□□□ -2.04
SNC1YAL030W CCT7P42943 550 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W MRX6P48564 524 aa2.29□□□□□ -2.04
SNC1YAL030W STR3P53101 465 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W YGR066CP53242 292 aa2.29□□□□□ -2.04
SNC1YAL030W COG2P53271 262 aa2.29□□□□□ -2.04
SNC1YAL030W DCP2P53550 970 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W CPR8P53728 308 aa2.29□□□□□ -2.04
SNC1YAL030W KIN4Q01919 800 aa2.29□□□□□ -2.04
SNC1YAL030W RPT6Q01939 405 aaKnown RBP2.29□□□□□ -2.04
SNC1YAL030W NGL3Q03210 505 aa2.29□□□□□ -2.04
SNC1YAL030W TRS23Q03784 219 aa2.29□□□□□ -2.04
SNC1YAL030W SYF1Q04048 859 aaPredicted RBP2.29□□□□□ -2.04
SNC1YAL030W STP3Q05937 343 aa2.29□□□□□ -2.04
SNC1YAL030W ESC8Q08119 714 aa2.29□□□□□ -2.04
SNC1YAL030W GPN2Q08726 347 aaPredicted RBP2.29□□□□□ -2.04
SNC1YAL030W YPL272CQ08984 517 aa2.29□□□□□ -2.04
SNC1YAL030W SNU66Q12420 587 aaPredicted RBP2.29□□□□□ -2.04
SNC1YAL030W RTN2Q12443 393 aa2.29□□□□□ -2.04
SNC1YAL030W ZPS1Q12512 249 aa2.29□□□□□ -2.04
SNC1YAL030W YJR112W-AQ3E743 109 aa2.29□□□□□ -2.04
SNC1YAL030W Q0010Q9ZZX9 128 aa2.29□□□□□ -2.04
SNC1YAL030W YMR084WA2P2R3 262 aa2.28□□□□□ -2.04
SNC1YAL030W HSP82P02829 709 aaKnown RBP2.28□□□□□ -2.04
SNC1YAL030W ARG3P05150 338 aa2.28□□□□□ -2.04
SNC1YAL030W TPK2P06245 380 aa2.28□□□□□ -2.04
SNC1YAL030W DFR1P07807 211 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
SNC1YAL030W PCT1P13259 424 aa2.28□□□□□ -2.04
SNC1YAL030W CBS1P14066 229 aa2.28□□□□□ -2.04
SNC1YAL030W RNR3P21672 869 aaKnown RBP2.28□□□□□ -2.04
SNC1YAL030W YSP3P25036 478 aa2.28□□□□□ -2.04
SNC1YAL030W RPC53P25441 422 aa2.28□□□□□ -2.04
SNC1YAL030W LAC1P28496 418 aa2.28□□□□□ -2.04
SNC1YAL030W VMA8P32610 256 aaKnown RBP2.28□□□□□ -2.04
SNC1YAL030W GDA1P32621 518 aa2.28□□□□□ -2.04
SNC1YAL030W NTR2P36118 322 aaPredicted RBP2.28□□□□□ -2.04
SNC1YAL030W KTR3P38130 404 aaPredicted RBP2.28□□□□□ -2.04
SNC1YAL030W UBP13P38187 747 aa2.28□□□□□ -2.04
SNC1YAL030W VBA2P38358 474 aaKnown RBP2.28□□□□□ -2.04
SNC1YAL030W MUP3P38734 546 aa2.28□□□□□ -2.04
SNC1YAL030W CHS7P38843 316 aa2.28□□□□□ -2.04
SNC1YAL030W SEC31P38968 1273 aaKnown RBP2.28□□□□□ -2.04
SNC1YAL030W MIT1P40002 666 aa2.28□□□□□ -2.04
SNC1YAL030W RGI2P40188 164 aa2.28□□□□□ -2.04
SNC1YAL030W SEC24P40482 926 aaKnown RBP2.28□□□□□ -2.04
SNC1YAL030W SPO22P40511 975 aa2.28□□□□□ -2.04
SNC1YAL030W MET28P40573 187 aa2.28□□□□□ -2.04
SNC1YAL030W GLO1P50107 326 aa2.28□□□□□ -2.04
SNC1YAL030W YML6P51998 286 aa2.28□□□□□ -2.04
SNC1YAL030W DSD1P53095 428 aa2.28□□□□□ -2.04
SNC1YAL030W NNF2P53253 936 aa2.28□□□□□ -2.04
SNC1YAL030W IST1P53843 298 aaPredicted RBP2.28□□□□□ -2.04
SNC1YAL030W TIM44Q01852 431 aa2.28□□□□□ -2.04
SNC1YAL030W YPL071CQ02864 156 aa2.28□□□□□ -2.04
SNC1YAL030W YML119WQ03208 357 aa2.28□□□□□ -2.04
SNC1YAL030W SXM1Q04175 944 aaKnown RBP2.28□□□□□ -2.04
SNC1YAL030W PLM2Q04383 521 aa2.28□□□□□ -2.04
SNC1YAL030W ARP9Q05123 467 aa2.28□□□□□ -2.04
SNC1YAL030W PSR1Q07800 427 aa2.28□□□□□ -2.04
SNC1YAL030W TCO89Q08921 799 aa2.28□□□□□ -2.04
SNC1YAL030W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms