RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 NRBP1Q9UHY1 535 aa22.23■■□□□ 1.15
LAPTM4B-204ENST00000619747 PYCARDQ9ULZ3 195 aa22.23■■□□□ 1.15
LAPTM4B-204ENST00000619747 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.23■■□□□ 1.15
LAPTM4B-204ENST00000619747 PCDHB6Q9Y5E3 794 aa22.23■■□□□ 1.15
LAPTM4B-204ENST00000619747 TULP2O00295 520 aa22.23■■□□□ 1.15
LAPTM4B-204ENST00000619747 CMA1P23946 247 aa22.23■■□□□ 1.15
LAPTM4B-204ENST00000619747 TFAP4Q01664 338 aa22.23■■□□□ 1.15
LAPTM4B-204ENST00000619747 PDE4BQ07343 736 aa22.23■■□□□ 1.15
LAPTM4B-204ENST00000619747 CRY2Q49AN0 593 aa22.23■■□□□ 1.15
LAPTM4B-204ENST00000619747 SYKP43405 635 aa22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 PLCD1P51178 756 aa22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 IQCB1Q15051 598 aa22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 ZRSR1Q15695 479 aaKnown RBP22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 POLRMTO00411 1230 aaKnown RBP22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 SLC3A2P08195 630 aaKnown RBP22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 PKN1Q16512 942 aa22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 DPCR1Q3MIW9 517 aa22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 NOM1Q5C9Z4 860 aaKnown RBP22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 MKNK2Q9HBH9 465 aa22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 KIAA1468Q9P260 1216 aa22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 ARPP21Q9UBL0 812 aaPredicted RBP22.22■■□□□ 1.15
LAPTM4B-204ENST00000619747 USP17L3A6NCW0 530 aa22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 USP17L4A6NCW7 530 aa22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 F8W031 263 aaPredicted RBP22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 EARS2Q5JPH6 523 aaKnown RBP22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 SLC27A3Q5K4L6 730 aa22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 USP17L1Q7RTZ2 530 aa22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 PDS5AQ29RF7 1337 aaKnown RBP22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 FGRP09769 529 aa22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 CHRM1P11229 460 aaPredicted RBP22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 MFSD14BQ5SR56 506 aa22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 AOPEPQ8N6M6 819 aa22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 KIAA1524Q8TCG1 905 aa22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 SRBD1Q8N5C6 995 aaKnown RBP22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 MTA3Q9BTC8 594 aa22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 ANO10Q9NW15 660 aa22.21■■□□□ 1.15
LAPTM4B-204ENST00000619747 DUOX1Q9NRD9 1551 aa22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 PTGS1P23219 599 aa22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 FUT2Q10981 343 aa22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 ZNF827Q17R98 1081 aa22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 MSL1Q68DK7 614 aa22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 TBC1D16Q8TBP0 767 aa22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 C12orf60Q5U649 245 aa22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 PDILTQ8N807 584 aa22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 JMYQ8N9B5 988 aa22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 CTCFLQ8NI51 663 aaPredicted RBP22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 NOL10Q9BSC4 688 aaKnown RBP22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 RNF26Q9BY78 433 aaPredicted RBP22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 CALCOCO1Q9P1Z2 691 aa22.2■■□□□ 1.14
LAPTM4B-204ENST00000619747 BAG3O95817 575 aa22.19■■□□□ 1.14
LAPTM4B-204ENST00000619747 BTDP43251 543 aa22.19■■□□□ 1.14
LAPTM4B-204ENST00000619747 MORC2Q9Y6X9 1032 aaPredicted RBP22.19■■□□□ 1.14
LAPTM4B-204ENST00000619747 ECM29Q5VYK3 1845 aa22.19■■□□□ 1.14
LAPTM4B-204ENST00000619747 ORC4O43929 436 aa22.19■■□□□ 1.14
LAPTM4B-204ENST00000619747 PNOCQ13519 176 aa22.19■■□□□ 1.14
LAPTM4B-204ENST00000619747 IL17RBQ9NRM6 502 aa22.19■■□□□ 1.14
LAPTM4B-204ENST00000619747 UTRNP46939 3433 aa22.19■■□□□ 1.14
LAPTM4B-204ENST00000619747 PPP6R2O75170 966 aa22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 GTF2IP78347 998 aa22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 RCSD1Q6JBY9 416 aa22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 CCDC186Q7Z3E2 898 aa22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 KCNF1Q9H3M0 494 aa22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 MKRN1Q9UHC7 482 aaKnown RBP22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 STX8Q9UNK0 236 aa22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 APBA3O96018 575 aa22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 ZNF75DP51815 510 aa22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 LONRF3Q496Y0 759 aa22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 DHX40Q8IX18 779 aaKnown RBP22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 FOXP1Q9H334 677 aaPredicted RBP22.18■■□□□ 1.14
LAPTM4B-204ENST00000619747 FOXN1O15353 648 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 BBOX1O75936 387 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 ATP2B4P23634 1241 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 RASGRP2Q7LDG7 609 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 CEP57L1Q8IYX8 460 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 MXD3Q9BW11 206 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 NID2Q14112 1375 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 UBR3Q6ZT12 1888 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 WNT7AO00755 349 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 SBK1Q52WX2 424 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 TMTC3Q6ZXV5 915 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 USP49Q70CQ1 688 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 COL23A1Q86Y22 540 aaPredicted RBP22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 KIF18AQ8NI77 898 aa22.17■■□□□ 1.14
LAPTM4B-204ENST00000619747 ADAMTS3O15072 1205 aa22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 LRMPQ12912 555 aa22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 STAG2Q8N3U4 1231 aa22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 KRI1Q8N9T8 703 aaKnown RBP22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 KCNH3Q9ULD8 1083 aa22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 CCDC88AQ3V6T2 1871 aa22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 TSPY3P0CV98 308 aa22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 TSPY8P0CW00 308 aa22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 RTFDC1Q9BY42 306 aaPredicted RBP22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 PRPF3O43395 683 aaKnown RBP22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 PCP11498 1178 aaKnown RBP22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 XBP1P17861 261 aa22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 RILPL1Q5EBL4 403 aa22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 KAT14Q9H8E8 782 aa22.16■■□□□ 1.14
LAPTM4B-204ENST00000619747 RCAN1P53805 252 aa22.15■■□□□ 1.14
LAPTM4B-204ENST00000619747 GSTO1P78417 241 aa22.15■■□□□ 1.14
LAPTM4B-204ENST00000619747 DOK7Q18PE1 504 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms