RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 CNTNAP5Q8WYK1 1306 aa15.92■□□□□ 0.14
CNTD1-204ENST00000588408 ORC4O43929 436 aa15.91■□□□□ 0.14
CNTD1-204ENST00000588408 GRAPQ13588 217 aa15.91■□□□□ 0.14
CNTD1-204ENST00000588408 ZNF827Q17R98 1081 aa15.91■□□□□ 0.14
CNTD1-204ENST00000588408 PRR5LQ6MZQ0 368 aa15.91■□□□□ 0.14
CNTD1-204ENST00000588408 CNBD1Q8NA66 436 aa15.91■□□□□ 0.14
CNTD1-204ENST00000588408 GRAPLQ8TC17 118 aaPredicted RBP15.91■□□□□ 0.14
CNTD1-204ENST00000588408 ATP8A2Q9NTI2 1148 aa15.91■□□□□ 0.14
CNTD1-204ENST00000588408 A0A087X0B3 334 aa15.91■□□□□ 0.14
CNTD1-204ENST00000588408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.91■□□□□ 0.14
CNTD1-204ENST00000588408 HSP90AA4PQ58FG1 418 aa15.91■□□□□ 0.14
CNTD1-204ENST00000588408 KRT2P35908 639 aa15.9■□□□□ 0.14
CNTD1-204ENST00000588408 GPSM2P81274 684 aa15.9■□□□□ 0.14
CNTD1-204ENST00000588408 TMC6Q7Z403 805 aa15.9■□□□□ 0.14
CNTD1-204ENST00000588408 SLC44A5Q8NCS7 719 aa15.9■□□□□ 0.14
CNTD1-204ENST00000588408 IL17RBQ9NRM6 502 aa15.9■□□□□ 0.14
CNTD1-204ENST00000588408 TSPY2A6NKD2 308 aa15.9■□□□□ 0.14
CNTD1-204ENST00000588408 RIOK3O14730 519 aaKnown RBP15.9■□□□□ 0.14
CNTD1-204ENST00000588408 SKILP12757 684 aa15.9■□□□□ 0.14
CNTD1-204ENST00000588408 EPSTI1Q96J88 318 aa15.9■□□□□ 0.14
CNTD1-204ENST00000588408 PRIMPOLQ96LW4 560 aa15.9■□□□□ 0.14
CNTD1-204ENST00000588408 ARPP21Q9UBL0 812 aaPredicted RBP15.9■□□□□ 0.14
CNTD1-204ENST00000588408 MKRN1Q9UHC7 482 aaKnown RBP15.9■□□□□ 0.14
CNTD1-204ENST00000588408 SRPRBQ9Y5M8 271 aaKnown RBP15.9■□□□□ 0.14
CNTD1-204ENST00000588408 CDK5RAP2Q96SN8 1893 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 DYNC1I1O14576 645 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 DDAH1O94760 285 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 LDHBP07195 334 aaKnown RBP15.89■□□□□ 0.13
CNTD1-204ENST00000588408 FANCCQ00597 558 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 ZNF174Q15697 407 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 TNFRSF25Q93038 417 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 MAN1B1Q9UKM7 699 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 USP17L3A6NCW0 530 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 USP17L4A6NCW7 530 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 CASP1P29466 404 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 USP5P45974 858 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 TFAP4Q01664 338 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 SBK1Q52WX2 424 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 ARMCX5Q6P1M9 558 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 RASGRP2Q7LDG7 609 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 USP17L1Q7RTZ2 530 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 RBM28Q9NW13 759 aaKnown RBP15.89■□□□□ 0.13
CNTD1-204ENST00000588408 SAP30BPQ9UHR5 308 aaKnown RBP15.89■□□□□ 0.13
CNTD1-204ENST00000588408 MTMR7Q9Y216 660 aa15.89■□□□□ 0.13
CNTD1-204ENST00000588408 UBR3Q6ZT12 1888 aa15.88■□□□□ 0.13
CNTD1-204ENST00000588408 ACTN4O43707 911 aaKnown RBP15.88■□□□□ 0.13
CNTD1-204ENST00000588408 PLCD1P51178 756 aa15.88■□□□□ 0.13
CNTD1-204ENST00000588408 AFF2P51816 1311 aa15.88■□□□□ 0.13
CNTD1-204ENST00000588408 POSTNQ15063 836 aa15.88■□□□□ 0.13
CNTD1-204ENST00000588408 PPP2R5BQ15173 497 aa15.88■□□□□ 0.13
CNTD1-204ENST00000588408 MEX3CQ5U5Q3 659 aaKnown RBP15.88■□□□□ 0.13
CNTD1-204ENST00000588408 C12orf60Q5U649 245 aa15.88■□□□□ 0.13
CNTD1-204ENST00000588408 SEPT12Q8IYM1 358 aa15.88■□□□□ 0.13
CNTD1-204ENST00000588408 STAG2Q8N3U4 1231 aa15.88■□□□□ 0.13
CNTD1-204ENST00000588408 TGFBRAP1Q8WUH2 860 aa15.88■□□□□ 0.13
CNTD1-204ENST00000588408 FANCLQ9NW38 375 aa15.88■□□□□ 0.13
CNTD1-204ENST00000588408 TRMT1Q9NXH9 659 aaKnown RBP15.88■□□□□ 0.13
CNTD1-204ENST00000588408 TRIM75PA6NK02 468 aa15.87■□□□□ 0.13
CNTD1-204ENST00000588408 SMTNL1A8MU46 457 aa15.87■□□□□ 0.13
CNTD1-204ENST00000588408 PCP11498 1178 aaKnown RBP15.87■□□□□ 0.13
CNTD1-204ENST00000588408 TPD52L1Q16890 204 aaPredicted RBP15.87■□□□□ 0.13
CNTD1-204ENST00000588408 CTCFLQ8NI51 663 aaPredicted RBP15.87■□□□□ 0.13
CNTD1-204ENST00000588408 XDHP47989 1333 aa15.87■□□□□ 0.13
CNTD1-204ENST00000588408 IKBKBO14920 756 aa15.87■□□□□ 0.13
CNTD1-204ENST00000588408 CALM1P0DP23 149 aa15.87■□□□□ 0.13
CNTD1-204ENST00000588408 CALM2P0DP24 149 aa15.87■□□□□ 0.13
CNTD1-204ENST00000588408 CALM3P0DP25 149 aa15.87■□□□□ 0.13
CNTD1-204ENST00000588408 GYS1P13807 737 aa15.87■□□□□ 0.13
CNTD1-204ENST00000588408 FMR1Q06787 632 aaKnown RBP eCLIP15.87■□□□□ 0.13
CNTD1-204ENST00000588408 MAPKAPK5Q8IW41 473 aa15.87■□□□□ 0.13
CNTD1-204ENST00000588408 BCL11BQ9C0K0 894 aaPredicted RBP15.87■□□□□ 0.13
CNTD1-204ENST00000588408 NAV1Q8NEY1 1877 aa15.87■□□□□ 0.13
CNTD1-204ENST00000588408 TMEM232C9JQI7 657 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 TNNT1P13805 278 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 XBP1P17861 261 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 MYL5Q02045 173 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 GOLGA8FQ08AF8 430 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 GOLGA8DPQ0D2H9 430 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 SLC35G1Q2M3R5 365 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 SPTY2D1Q68D10 685 aaPredicted RBP15.86■□□□□ 0.13
CNTD1-204ENST00000588408 TRMT44Q8IYL2 757 aaKnown RBP15.86■□□□□ 0.13
CNTD1-204ENST00000588408 ZNF710Q8N1W2 664 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 GPKOWQ92917 476 aaPredicted RBP eCLIP15.86■□□□□ 0.13
CNTD1-204ENST00000588408 DHX58Q96C10 678 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 MED15Q96RN5 788 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 OSBPL5Q9H0X9 879 aaPredicted RBP15.86■□□□□ 0.13
CNTD1-204ENST00000588408 LEMD3Q9Y2U8 911 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 UFL1O94874 794 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 ZNF579Q8NAF0 562 aaKnown RBP15.86■□□□□ 0.13
CNTD1-204ENST00000588408 RPGRQ92834 1020 aaKnown RBP15.86■□□□□ 0.13
CNTD1-204ENST00000588408 ARID3AQ99856 593 aa15.86■□□□□ 0.13
CNTD1-204ENST00000588408 SPATA31A6Q5VVP1 1343 aa15.85■□□□□ 0.13
CNTD1-204ENST00000588408 SCG2P13521 617 aa15.85■□□□□ 0.13
CNTD1-204ENST00000588408 PIK3AP1Q6ZUJ8 805 aa15.85■□□□□ 0.13
CNTD1-204ENST00000588408 WDR66Q8TBY9 1149 aa15.85■□□□□ 0.13
CNTD1-204ENST00000588408 SYMPKQ92797 1274 aaKnown RBP15.85■□□□□ 0.13
CNTD1-204ENST00000588408 SERPINB2P05120 415 aa15.85■□□□□ 0.13
CNTD1-204ENST00000588408 GTF2F1P35269 517 aaKnown RBP eCLIP15.85■□□□□ 0.13
CNTD1-204ENST00000588408 AFMP43652 599 aa15.85■□□□□ 0.13
CNTD1-204ENST00000588408 SARSP49591 514 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms