RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 MSX1P28360 303 aa8.76□□□□□ -1.01
CCDC60-205ENST00000546345 WEE1P30291 646 aa8.76□□□□□ -1.01
CCDC60-205ENST00000546345 ZNF280AP59817 542 aaPredicted RBP8.76□□□□□ -1.01
CCDC60-205ENST00000546345 SLC10A5Q5PT55 438 aa8.76□□□□□ -1.01
CCDC60-205ENST00000546345 LRP10Q7Z4F1 713 aa8.76□□□□□ -1.01
CCDC60-205ENST00000546345 STAG2Q8N3U4 1231 aa8.76□□□□□ -1.01
CCDC60-205ENST00000546345 C1orf216Q8TAB5 229 aa8.76□□□□□ -1.01
CCDC60-205ENST00000546345 SHISA4Q96DD7 197 aa8.76□□□□□ -1.01
CCDC60-205ENST00000546345 GPAMQ9HCL2 828 aa8.76□□□□□ -1.01
CCDC60-205ENST00000546345 H3BM21 787 aa8.75□□□□□ -1.01
CCDC60-205ENST00000546345 H7C1W4 665 aa8.75□□□□□ -1.01
CCDC60-205ENST00000546345 IGF2BP3O00425 579 aaKnown RBP eCLIP8.75□□□□□ -1.01
CCDC60-205ENST00000546345 GRAPQ13588 217 aa8.75□□□□□ -1.01
CCDC60-205ENST00000546345 PRAMEF18Q5VWM3 479 aa8.75□□□□□ -1.01
CCDC60-205ENST00000546345 NGEFQ8N5V2 710 aa8.75□□□□□ -1.01
CCDC60-205ENST00000546345 GRAPLQ8TC17 118 aaPredicted RBP8.75□□□□□ -1.01
CCDC60-205ENST00000546345 CD99L2Q8TCZ2 262 aa8.75□□□□□ -1.01
CCDC60-205ENST00000546345 PRIMPOLQ96LW4 560 aa8.75□□□□□ -1.01
CCDC60-205ENST00000546345 C2orf49Q9BVC5 232 aaPredicted RBP8.75□□□□□ -1.01
CCDC60-205ENST00000546345 ZDHHC3Q9NYG2 299 aa8.75□□□□□ -1.01
CCDC60-205ENST00000546345 POLLQ9UGP5 575 aa8.75□□□□□ -1.01
CCDC60-205ENST00000546345 PRUNE2Q8WUY3 3088 aa8.74□□□□□ -1.01
CCDC60-205ENST00000546345 MUC3AQ02505 3323 aa8.74□□□□□ -1.01
CCDC60-205ENST00000546345 EML1O00423 815 aa8.74□□□□□ -1.01
CCDC60-205ENST00000546345 PRMT3O60678 531 aa8.74□□□□□ -1.01
CCDC60-205ENST00000546345 BBOX1O75936 387 aa8.74□□□□□ -1.01
CCDC60-205ENST00000546345 VIL1P09327 827 aaKnown RBP8.74□□□□□ -1.01
CCDC60-205ENST00000546345 SREBF2Q12772 1141 aa8.74□□□□□ -1.01
CCDC60-205ENST00000546345 MCM10Q7L590 875 aa8.74□□□□□ -1.01
CCDC60-205ENST00000546345 PGBD3Q8N328 593 aa8.74□□□□□ -1.01
CCDC60-205ENST00000546345 CLP1Q92989 425 aaKnown RBP8.74□□□□□ -1.01
CCDC60-205ENST00000546345 GMCL1Q96IK5 515 aa8.74□□□□□ -1.01
CCDC60-205ENST00000546345 GMLQ99445 158 aa8.74□□□□□ -1.01
CCDC60-205ENST00000546345 COL25A1Q9BXS0 654 aaPredicted RBP8.74□□□□□ -1.01
CCDC60-205ENST00000546345 HCN4Q9Y3Q4 1203 aa8.74□□□□□ -1.01
CCDC60-205ENST00000546345 HCLS1P14317 486 aaPredicted RBP8.73□□□□□ -1.01
CCDC60-205ENST00000546345 TXLNAP40222 546 aa8.73□□□□□ -1.01
CCDC60-205ENST00000546345 PTPN12Q05209 780 aaKnown RBP8.73□□□□□ -1.01
CCDC60-205ENST00000546345 DCTN1Q14203 1278 aa8.73□□□□□ -1.01
CCDC60-205ENST00000546345 ARSJQ5FYB0 599 aaPredicted RBP8.73□□□□□ -1.01
CCDC60-205ENST00000546345 SH3PXD2AQ5TCZ1 1133 aa8.73□□□□□ -1.01
CCDC60-205ENST00000546345 KIF6Q6ZMV9 814 aa8.73□□□□□ -1.01
CCDC60-205ENST00000546345 TRIM22Q8IYM9 498 aa8.73□□□□□ -1.01
CCDC60-205ENST00000546345 VWA5B2Q8N398 1253 aa8.73□□□□□ -1.01
CCDC60-205ENST00000546345 NANOS1Q8WY41 292 aaKnown RBP8.73□□□□□ -1.01
CCDC60-205ENST00000546345 VTI1AQ96AJ9 217 aa8.73□□□□□ -1.01
CCDC60-205ENST00000546345 CUEDC1Q9NWM3 386 aaPredicted RBP8.73□□□□□ -1.01
CCDC60-205ENST00000546345 CDC14CA4D256 554 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 WFS1O76024 890 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 PRKAR2BP31323 418 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 GPSM2P81274 684 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 NFX1Q12986 1120 aaKnown RBP8.72□□□□□ -1.01
CCDC60-205ENST00000546345 CRHR2Q13324 411 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 DBN1Q16643 649 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 PARP10Q53GL7 1025 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 LDLRAD1Q5T700 205 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 SV2AQ7L0J3 742 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 CELF1Q92879 486 aaKnown RBP8.72□□□□□ -1.01
CCDC60-205ENST00000546345 IRF7Q92985 503 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 RUBCNLQ9H714 662 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.72□□□□□ -1.01
CCDC60-205ENST00000546345 FZD1Q9UP38 647 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 PTCH2Q9Y6C5 1203 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 TTC28Q96AY4 2481 aa8.72□□□□□ -1.01
CCDC60-205ENST00000546345 MYL6BP14649 208 aa8.71□□□□□ -1.02
CCDC60-205ENST00000546345 PDE4CQ08493 712 aa8.71□□□□□ -1.02
CCDC60-205ENST00000546345 NBPF9Q3BBW0 867 aa8.71□□□□□ -1.02
CCDC60-205ENST00000546345 EFHC2Q5JST6 749 aa8.71□□□□□ -1.02
CCDC60-205ENST00000546345 C1orf53Q5VUE5 145 aa8.71□□□□□ -1.02
CCDC60-205ENST00000546345 PPP1R42Q7Z4L9 355 aa8.71□□□□□ -1.02
CCDC60-205ENST00000546345 UBE2Q1Q7Z7E8 422 aa8.71□□□□□ -1.02
CCDC60-205ENST00000546345 ERO1AQ96HE7 468 aa8.71□□□□□ -1.02
CCDC60-205ENST00000546345 UTP14AQ9BVJ6 771 aaKnown RBP8.71□□□□□ -1.02
CCDC60-205ENST00000546345 NUCKS1Q9H1E3 243 aaKnown RBP8.71□□□□□ -1.02
CCDC60-205ENST00000546345 TMX4Q9H1E5 349 aaPredicted RBP8.71□□□□□ -1.02
CCDC60-205ENST00000546345 CRISPLD1Q9H336 500 aa8.71□□□□□ -1.02
CCDC60-205ENST00000546345 MYOZ2Q9NPC6 264 aa8.71□□□□□ -1.02
CCDC60-205ENST00000546345 USTQ9Y2C2 406 aa8.71□□□□□ -1.02
CCDC60-205ENST00000546345 COL1A1P02452 1464 aaPredicted RBP8.7□□□□□ -1.02
CCDC60-205ENST00000546345 DOCK3Q8IZD9 2030 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 CDH23Q9H251 3354 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 U2SURPO15042 1029 aaKnown RBP8.7□□□□□ -1.02
CCDC60-205ENST00000546345 ATP4AP20648 1035 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 LBRQ14739 615 aaKnown RBP8.7□□□□□ -1.02
CCDC60-205ENST00000546345 OCLNQ16625 522 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 PROSER3Q2NL68 480 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 TREML4Q6UXN2 200 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 NLRP10Q86W26 655 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 ALDH16A1Q8IZ83 802 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 AGBL3Q8NEM8 1001 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 TBC1D16Q8TBP0 767 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 CLMNQ96JQ2 1002 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 PHACTR1Q9C0D0 580 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 EFCC1Q9HA90 598 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 NEUROD4Q9HD90 331 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 MIS18AQ9NYP9 233 aa8.7□□□□□ -1.02
CCDC60-205ENST00000546345 CXXC1Q9P0U4 656 aaPredicted RBP8.7□□□□□ -1.02
CCDC60-205ENST00000546345 NSFL1CQ9UNZ2 370 aaKnown RBP8.7□□□□□ -1.02
CCDC60-205ENST00000546345 RRP7AQ9Y3A4 280 aaKnown RBP8.7□□□□□ -1.02
CCDC60-205ENST00000546345 DDX60LQ5H9U9 1706 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms