RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 PTPN21Q16825 1174 aa16.97■□□□□ 0.31
CHMP7-210ENST00000523091 TMC6Q7Z403 805 aa16.97■□□□□ 0.31
CHMP7-210ENST00000523091 PHF20Q9BVI0 1012 aa16.97■□□□□ 0.31
CHMP7-210ENST00000523091 CSRNP2Q9H175 543 aa16.97■□□□□ 0.31
CHMP7-210ENST00000523091 LRRC4BQ9NT99 713 aa16.97■□□□□ 0.31
CHMP7-210ENST00000523091 RIOK3O14730 519 aaKnown RBP16.96■□□□□ 0.31
CHMP7-210ENST00000523091 DIXDC1Q155Q3 683 aa16.96■□□□□ 0.31
CHMP7-210ENST00000523091 PDCL2Q8N4E4 241 aa16.96■□□□□ 0.31
CHMP7-210ENST00000523091 SMTNL1A8MU46 457 aa16.96■□□□□ 0.31
CHMP7-210ENST00000523091 ADAMTS3O15072 1205 aa16.96■□□□□ 0.31
CHMP7-210ENST00000523091 TPD52L1Q16890 204 aaPredicted RBP16.96■□□□□ 0.31
CHMP7-210ENST00000523091 TMTC3Q6ZXV5 915 aa16.96■□□□□ 0.31
CHMP7-210ENST00000523091 DYNLL2Q96FJ2 89 aa16.96■□□□□ 0.31
CHMP7-210ENST00000523091 ATP8A2Q9NTI2 1148 aa16.96■□□□□ 0.31
CHMP7-210ENST00000523091 TSPY2A6NKD2 308 aa16.95■□□□□ 0.3
CHMP7-210ENST00000523091 SPDYE4A6NLX3 237 aa16.95■□□□□ 0.3
CHMP7-210ENST00000523091 KRT2P35908 639 aa16.95■□□□□ 0.3
CHMP7-210ENST00000523091 FANCCQ00597 558 aa16.95■□□□□ 0.3
CHMP7-210ENST00000523091 PPP2R5BQ15173 497 aa16.95■□□□□ 0.3
CHMP7-210ENST00000523091 HSP90AA4PQ58FG1 418 aa16.95■□□□□ 0.3
CHMP7-210ENST00000523091 TAF3Q5VWG9 929 aa16.95■□□□□ 0.3
CHMP7-210ENST00000523091 DPF2Q92785 391 aa16.95■□□□□ 0.3
CHMP7-210ENST00000523091 TMEM51Q9NW97 253 aa16.95■□□□□ 0.3
CHMP7-210ENST00000523091 SRPRBQ9Y5M8 271 aaKnown RBP16.95■□□□□ 0.3
CHMP7-210ENST00000523091 PDS5AQ29RF7 1337 aaKnown RBP16.95■□□□□ 0.3
CHMP7-210ENST00000523091 ORC4O43929 436 aa16.95■□□□□ 0.3
CHMP7-210ENST00000523091 ZNF827Q17R98 1081 aa16.95■□□□□ 0.3
CHMP7-210ENST00000523091 SH3RF3Q8TEJ3 882 aaPredicted RBP16.95■□□□□ 0.3
CHMP7-210ENST00000523091 RBM28Q9NW13 759 aaKnown RBP16.95■□□□□ 0.3
CHMP7-210ENST00000523091 TRMT1Q9NXH9 659 aaKnown RBP16.95■□□□□ 0.3
CHMP7-210ENST00000523091 TNNT1P13805 278 aa16.94■□□□□ 0.3
CHMP7-210ENST00000523091 XBP1P17861 261 aa16.94■□□□□ 0.3
CHMP7-210ENST00000523091 GRAPQ13588 217 aa16.94■□□□□ 0.3
CHMP7-210ENST00000523091 NPY5RQ15761 445 aa16.94■□□□□ 0.3
CHMP7-210ENST00000523091 CNBD1Q8NA66 436 aa16.94■□□□□ 0.3
CHMP7-210ENST00000523091 GRAPLQ8TC17 118 aaPredicted RBP16.94■□□□□ 0.3
CHMP7-210ENST00000523091 EPSTI1Q96J88 318 aa16.94■□□□□ 0.3
CHMP7-210ENST00000523091 CNTNAP5Q8WYK1 1306 aa16.94■□□□□ 0.3
CHMP7-210ENST00000523091 IKBKBO14920 756 aa16.94■□□□□ 0.3
CHMP7-210ENST00000523091 PCP11498 1178 aaKnown RBP16.94■□□□□ 0.3
CHMP7-210ENST00000523091 TPM4P67936 248 aa16.94■□□□□ 0.3
CHMP7-210ENST00000523091 POSTNQ15063 836 aa16.94■□□□□ 0.3
CHMP7-210ENST00000523091 RCSD1Q6JBY9 416 aa16.94■□□□□ 0.3
CHMP7-210ENST00000523091 ARPP21Q9UBL0 812 aaPredicted RBP16.94■□□□□ 0.3
CHMP7-210ENST00000523091 A0A087X0B3 334 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 TRIM75PA6NK02 468 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 DDAH1O94760 285 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 LDHBP07195 334 aaKnown RBP16.93■□□□□ 0.3
CHMP7-210ENST00000523091 USP5P45974 858 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 ZNF174Q15697 407 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 ARMCX5Q6P1M9 558 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 CTCFLQ8NI51 663 aaPredicted RBP16.93■□□□□ 0.3
CHMP7-210ENST00000523091 FANCLQ9NW38 375 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 MAN1B1Q9UKM7 699 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 CALM1P0DP23 149 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 CALM2P0DP24 149 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 CALM3P0DP25 149 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 MYL5Q02045 173 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 NHSQ6T4R5 1651 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 TFAP4Q01664 338 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 SBK1Q52WX2 424 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 OLFM4Q6UX06 510 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 GJD4Q96KN9 370 aaPredicted RBP16.93■□□□□ 0.3
CHMP7-210ENST00000523091 OSBPL5Q9H0X9 879 aaPredicted RBP16.93■□□□□ 0.3
CHMP7-210ENST00000523091 CEP131Q9UPN4 1083 aa16.93■□□□□ 0.3
CHMP7-210ENST00000523091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.92■□□□□ 0.3
CHMP7-210ENST00000523091 ACTN4O43707 911 aaKnown RBP16.92■□□□□ 0.3
CHMP7-210ENST00000523091 NEMFO60524 1076 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 PRR5LQ6MZQ0 368 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 ZNF579Q8NAF0 562 aaKnown RBP16.92■□□□□ 0.3
CHMP7-210ENST00000523091 SLC44A5Q8NCS7 719 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 IL17RBQ9NRM6 502 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 MKRN1Q9UHC7 482 aaKnown RBP16.92■□□□□ 0.3
CHMP7-210ENST00000523091 MTMR7Q9Y216 660 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 TAF1LQ8IZX4 1826 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 SERPINC1P01008 464 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 CASP1P29466 404 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 GPSM2P81274 684 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 SPTY2D1Q68D10 685 aaPredicted RBP16.92■□□□□ 0.3
CHMP7-210ENST00000523091 TGFBRAP1Q8WUH2 860 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 ANKRD7Q92527 254 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 ZNF592Q92610 1267 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 TNFRSF25Q93038 417 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 DHX58Q96C10 678 aa16.92■□□□□ 0.3
CHMP7-210ENST00000523091 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
CHMP7-210ENST00000523091 CCDC88AQ3V6T2 1871 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 USP17L3A6NCW0 530 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 USP17L4A6NCW7 530 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 UBASH3AP57075 661 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 FMR1Q06787 632 aaKnown RBP eCLIP16.91■□□□□ 0.3
CHMP7-210ENST00000523091 C12orf60Q5U649 245 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 USP17L1Q7RTZ2 530 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 THSD7AQ9UPZ6 1657 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 KIAA1551Q9HCM1 1747 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 DLEC1Q9Y238 1755 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 TMEM232C9JQI7 657 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 GSDMDP57764 484 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 TRMT44Q8IYL2 757 aaKnown RBP16.91■□□□□ 0.3
CHMP7-210ENST00000523091 STAG2Q8N3U4 1231 aa16.91■□□□□ 0.3
CHMP7-210ENST00000523091 IMPACTQ9P2X3 320 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms