RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 GALNT17Q6IS24 598 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 FAM186BQ8IYM0 893 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 LSMEM1Q8N8F7 131 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 SLC7A3Q8WY07 619 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 EDEM1Q92611 657 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 FAM167BQ9BTA0 163 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 ZNF112Q9UJU3 913 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 RRP15Q9Y3B9 282 aaKnown RBP7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 ADAMTS12P58397 1594 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 TISP43B9A030 160 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 B9A039 149 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 K7ENM7 598 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 RTCAO00442 366 aaKnown RBP7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 PITPNM1O00562 1244 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 RRP9O43818 475 aaKnown RBP7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 PCBP1Q15365 356 aaKnown RBP eCLIP7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 SEPT7Q16181 437 aaKnown RBP7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 LYPD8Q6UX82 237 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 CATIPQ7Z7H3 387 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 ARHGEF25Q86VW2 580 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 BRSK2Q8IWQ3 736 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 NAT8LQ8N9F0 302 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 RNF217Q8TC41 542 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 DHX36Q9H2U1 1008 aaKnown RBP7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 GGNBP2Q9H3C7 697 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 MKS1Q9NXB0 559 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 SUCOQ9UBS9 1254 aaKnown RBP7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 FHAD1B1AJZ9 1412 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 F8W031 263 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 F12P00748 615 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 POLR2BP30876 1174 aaKnown RBP7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 HPDP32754 393 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 HOXD12P35452 270 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 CCDC158Q5M9N0 1113 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 DHRS4Q9BTZ2 278 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 ZNF358Q9NW07 568 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 DDAH1O94760 285 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 PDGFAP04085 211 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 IGFBP4P22692 258 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 DDIT3P35638 169 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 IARSP41252 1262 aaKnown RBP7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 ADCY1Q08828 1119 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 GBX1Q14549 363 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 ODF1Q14990 250 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 FBXW10Q5XX13 1052 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 PKN3Q6P5Z2 889 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 TAB3Q8N5C8 712 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 CCT6BQ92526 530 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 KIAA1586Q9HCI6 787 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 LUC7LQ9NQ29 371 aaKnown RBP7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 DDX21Q9NR30 783 aaKnown RBP eCLIP7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 GGA3Q9NZ52 723 aa7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 XPO7Q9UIA9 1087 aaKnown RBP7.35□□□□□ -1.23
TRAPPC11-209ENST00000512476 CPP00450 1065 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 GARTP22102 1010 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 RCAN1P53805 252 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 UBASH3AP57075 661 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 ZKSCAN8Q15776 578 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 BRICD5Q6PL45 260 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 CYP26C1Q6V0L0 522 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 ZBTB10Q96DT7 871 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 APOL5Q9BWW9 433 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 CTTNBP2Q8WZ74 1663 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 ARAP1Q96P48 1450 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 VPS8Q8N3P4 1428 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 FOXO3O43524 673 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 CCNFP41002 786 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 SKOR2Q2VWA4 1001 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 SYDE2Q5VT97 1194 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 CXorf57Q6NSI4 855 aaKnown RBP7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 CBARPQ8N350 705 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 CARNMT1Q8N4J0 409 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 FBXO27Q8NI29 283 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 CLIP3Q96DZ5 547 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 IWS1Q96ST2 819 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 NCOA5Q9HCD5 579 aaKnown RBP7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 VTA1Q9NP79 307 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 ATP8A2Q9NTI2 1148 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 MAPRE3Q9UPY8 281 aa7.34□□□□□ -1.23
TRAPPC11-209ENST00000512476 SNAPC4Q5SXM2 1469 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 ARHGAP35Q9NRY4 1499 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 TMEM229AB2RXF0 380 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 AHCYL1O43865 530 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 PLOD3O60568 738 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 PLCB4Q15147 1175 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 YOD1Q5VVQ6 348 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 RUFY4Q6ZNE9 571 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 NECAB2Q7Z6G3 386 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 NAXEQ8NCW5 288 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 ANP32BQ92688 251 aaKnown RBP7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 TNIP3Q96KP6 325 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 PLEKHA5Q9HAU0 1116 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 ZFYVE28Q9HCC9 887 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 TMEM51Q9NW97 253 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 COMMD8Q9NX08 183 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 FAM8A1Q9UBU6 413 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 CDC23Q9UJX2 597 aa7.33□□□□□ -1.24
TRAPPC11-209ENST00000512476 PRDM4Q9UKN5 801 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms