RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 FOXP1Q9H334 677 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-204ENST00000395756 IL17RBQ9NRM6 502 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 DOK7Q18PE1 504 aa20.55■□□□□ 0.88
SREBF1-204ENST00000395756 CCDC144BQ3MJ40 725 aa20.55■□□□□ 0.88
SREBF1-204ENST00000395756 GPKOWQ92917 476 aaPredicted RBP eCLIP20.55■□□□□ 0.884e-7■■■□□ 16.3
SREBF1-204ENST00000395756 NAT10Q9H0A0 1025 aaKnown RBP20.55■□□□□ 0.88
SREBF1-204ENST00000395756 POLRMTO00411 1230 aaKnown RBP20.55■□□□□ 0.88
SREBF1-204ENST00000395756 FUT2Q10981 343 aa20.55■□□□□ 0.88
SREBF1-204ENST00000395756 MYH2Q9UKX2 1941 aa20.55■□□□□ 0.88
SREBF1-204ENST00000395756 C4AP0C0L4 1744 aa20.55■□□□□ 0.88
SREBF1-204ENST00000395756 C4BP0C0L5 1744 aa20.55■□□□□ 0.88
SREBF1-204ENST00000395756 APBA3O96018 575 aa20.54■□□□□ 0.88
SREBF1-204ENST00000395756 PTPN21Q16825 1174 aa20.54■□□□□ 0.88
SREBF1-204ENST00000395756 RILPL1Q5EBL4 403 aa20.54■□□□□ 0.88
SREBF1-204ENST00000395756 TMTC3Q6ZXV5 915 aa20.54■□□□□ 0.88
SREBF1-204ENST00000395756 PLA2G4DQ86XP0 818 aa20.54■□□□□ 0.88
SREBF1-204ENST00000395756 TEX11Q8IYF3 940 aa20.54■□□□□ 0.88
SREBF1-204ENST00000395756 NLRP5P59047 1200 aa20.54■□□□□ 0.88
SREBF1-204ENST00000395756 RCSD1Q6JBY9 416 aa20.54■□□□□ 0.88
SREBF1-204ENST00000395756 AMOTL1Q8IY63 956 aa20.54■□□□□ 0.88
SREBF1-204ENST00000395756 ORC4O43929 436 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 FGRP09769 529 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 LMOD1P29536 600 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-204ENST00000395756 KRT2P35908 639 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 ZNF827Q17R98 1081 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 CRY2Q49AN0 593 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 RESP18Q5W5W9 173 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 SCN7AQ01118 1682 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 TNRC6CQ9HCJ0 1690 aaKnown RBP20.53■□□□□ 0.88
SREBF1-204ENST00000395756 PRPF3O43395 683 aaKnown RBP20.53■□□□□ 0.88
SREBF1-204ENST00000395756 CUTAO60888 179 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 SMC2O95347 1197 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 ATP2B4P23634 1241 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 PNMA1Q8ND90 353 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 MTA3Q9BTC8 594 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 MYH13Q9UKX3 1938 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 LAMB2P55268 1798 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 PIK3AP1Q6ZUJ8 805 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 FOXP4Q8IVH2 680 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-204ENST00000395756 CSRNP2Q9H175 543 aa20.53■□□□□ 0.88
SREBF1-204ENST00000395756 GSTO1P78417 241 aa20.52■□□□□ 0.88
SREBF1-204ENST00000395756 SLC27A3Q5K4L6 730 aa20.52■□□□□ 0.88
SREBF1-204ENST00000395756 RASGRP4Q8TDF6 673 aa20.52■□□□□ 0.88
SREBF1-204ENST00000395756 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.52■□□□□ 0.88
SREBF1-204ENST00000395756 RBM28Q9NW13 759 aaKnown RBP20.52■□□□□ 0.88
SREBF1-204ENST00000395756 BBOX1O75936 387 aa20.52■□□□□ 0.88
SREBF1-204ENST00000395756 EPSTI1Q96J88 318 aa20.52■□□□□ 0.88
SREBF1-204ENST00000395756 SERTAD1Q9UHV2 236 aa20.52■□□□□ 0.88
SREBF1-204ENST00000395756 HPSEQ9Y251 543 aa20.52■□□□□ 0.88
SREBF1-204ENST00000395756 PCDHA5Q9Y5H7 936 aa20.52■□□□□ 0.88
SREBF1-204ENST00000395756 CAVIN2O95810 425 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 LDHCP07864 332 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 CALM1P0DP23 149 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 CALM2P0DP24 149 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 CALM3P0DP25 149 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 SBK1Q52WX2 424 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 METTL16Q86W50 562 aaKnown RBP20.51■□□□□ 0.87
SREBF1-204ENST00000395756 COL23A1Q86Y22 540 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-204ENST00000395756 RTFDC1Q9BY42 306 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-204ENST00000395756 VAT1LQ9HCJ6 419 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 FBXO2Q9UK22 296 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-204ENST00000395756 THSD7AQ9UPZ6 1657 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 PDS5AQ29RF7 1337 aaKnown RBP20.51■□□□□ 0.87
SREBF1-204ENST00000395756 TRIM75PA6NK02 468 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 SCNN1DP51172 638 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 PHF20Q9BVI0 1012 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 MKRN1Q9UHC7 482 aaKnown RBP20.51■□□□□ 0.87
SREBF1-204ENST00000395756 G3V3G9 751 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 CASP1P29466 404 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 DCAF8Q5TAQ9 597 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 KRBA2Q6ZNG9 492 aa20.51■□□□□ 0.87
SREBF1-204ENST00000395756 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.871e-6■■□□□ 12.2
SREBF1-204ENST00000395756 NHSQ6T4R5 1651 aa20.5■□□□□ 0.87
SREBF1-204ENST00000395756 PPEF1O14829 653 aaPredicted RBP20.5■□□□□ 0.87
SREBF1-204ENST00000395756 DDAH1O94760 285 aa20.5■□□□□ 0.87
SREBF1-204ENST00000395756 EIF6P56537 245 aaKnown RBP20.5■□□□□ 0.87
SREBF1-204ENST00000395756 NLRP12P59046 1061 aa20.5■□□□□ 0.87
SREBF1-204ENST00000395756 CACTINQ8WUQ7 758 aaKnown RBP20.5■□□□□ 0.87
SREBF1-204ENST00000395756 STAMQ92783 540 aa20.5■□□□□ 0.87
SREBF1-204ENST00000395756 SLURP2P0DP57 97 aa20.5■□□□□ 0.87
SREBF1-204ENST00000395756 PCP11498 1178 aaKnown RBP20.5■□□□□ 0.87
SREBF1-204ENST00000395756 DHX58Q96C10 678 aa20.5■□□□□ 0.87
SREBF1-204ENST00000395756 CNTNAP5Q8WYK1 1306 aa20.49■□□□□ 0.87
SREBF1-204ENST00000395756 PTPREP23469 700 aa20.49■□□□□ 0.87
SREBF1-204ENST00000395756 MCM7P33993 719 aa20.49■□□□□ 0.87
SREBF1-204ENST00000395756 AFMP43652 599 aa20.49■□□□□ 0.87
SREBF1-204ENST00000395756 HOMER1Q86YM7 354 aa20.49■□□□□ 0.87
SREBF1-204ENST00000395756 BRMS1Q9HCU9 246 aa20.49■□□□□ 0.87
SREBF1-204ENST00000395756 PRR29P0C7W0 189 aa20.49■□□□□ 0.87
SREBF1-204ENST00000395756 SCG2P13521 617 aa20.49■□□□□ 0.87
SREBF1-204ENST00000395756 ATP1A3P13637 1013 aa20.49■□□□□ 0.87
SREBF1-204ENST00000395756 PPP2R5BQ15173 497 aa20.49■□□□□ 0.87
SREBF1-204ENST00000395756 ZC3H12CQ9C0D7 883 aaKnown RBP20.49■□□□□ 0.87
SREBF1-204ENST00000395756 IFNKQ9P0W0 207 aa20.49■□□□□ 0.87
SREBF1-204ENST00000395756 VWA3AA6NCI4 1184 aa20.48■□□□□ 0.87
SREBF1-204ENST00000395756 RCAN1P53805 252 aa20.48■□□□□ 0.87
SREBF1-204ENST00000395756 SMAP1Q8IYB5 467 aaPredicted RBP20.48■□□□□ 0.87
SREBF1-204ENST00000395756 KIAA1524Q8TCG1 905 aa20.48■□□□□ 0.87
SREBF1-204ENST00000395756 IPO4Q8TEX9 1081 aaKnown RBP20.48■□□□□ 0.87
SREBF1-204ENST00000395756 MMP10P09238 476 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms