RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 PparaP23204 468 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Znf667Q2TL60 609 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Tbc1d2bQ3U0J8 965 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Map3k12Q60700 888 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Onecut3Q8K557 490 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 HibadhQ99L13 335 aaKnown RBP9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Tmem47Q9JJG6 181 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Chd5A2A8L1 1946 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Scn9aQ62205 1984 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Cyp2j7A0A140T8U1 504 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Dhx8A2A4P0 1244 aaKnown RBP9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Prpf38aQ4FK66 312 aaKnown RBP9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Large2Q5XPT3 690 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 DaglaQ6WQJ1 1044 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Pknox2Q8BG99 474 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Cdca8Q8BHX3 289 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Cdk8Q8R3L8 464 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Trmt44Q9D2Q2 713 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Xpo4Q9ESJ0 1151 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Mtmr2Q9Z2D1 643 aa9.69□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 UtrnE9Q6R7 3430 aa9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Gm30191A0A0U1RNT7 187 aa9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Tmem132bF7BAB2 1078 aa9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Eya3P97480 510 aa9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Armc2Q3URY6 854 aa9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Pdcl3Q8BVF2 240 aa9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Prpf3Q922U1 683 aaKnown RBP9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Myo3bQ1EG27 1305 aa9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ktn1Q61595 1327 aaKnown RBP9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ptgs1P22437 602 aa9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Usp5P56399 858 aaKnown RBP9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Arpp21Q9DCB4 807 aa9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ripk4Q9ERK0 786 aa9.68□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 A0A0U1RNP2 1173 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Nme9A0A1L1SUL6 329 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Copb2O55029 905 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Klhdc9Q3USL1 350 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Sun3Q5SS91 320 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Tm4sf1Q64302 202 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ano10Q8BH79 659 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Frmd3Q8BHD4 595 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ccz1Q8C1Y8 480 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Wasf1Q8R5H6 559 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Trim11Q99PQ2 467 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Mtfr1lQ9CWE0 289 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Cd2apQ9JLQ0 637 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Chaf1aQ9QWF0 911 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ltbp2O08999 1813 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Slc39a2G3X943 309 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Traf3ip1Q149C2 625 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Prom2Q3UUY6 835 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Kiaa1524Q8BWY9 907 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Lrrd1Q8C0R9 853 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Q8K2W9 541 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Atxn7Q8R4I1 867 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Rbm42Q91V81 474 aaKnown RBP9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Myo1hQ9D6A1 958 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Myoz2Q9JJW5 264 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ly75Q60767 1723 aa9.67□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Mboat4P0C7A3 435 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Bend4P86174 541 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 EgfrQ01279 1210 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Gas1Q01721 343 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Kif1bpQ6ZPU9 617 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Olfr119Q7TRJ5 321 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Dpp8Q80YA7 892 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Znf18Q810A1 556 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Slu7Q8BHJ9 585 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ppp1r11Q8K1L5 131 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Col23a1Q8K4G2 532 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Kri1Q8VDQ9 704 aaKnown RBP9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Tab2Q99K90 693 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Col20a1Q923P0 1320 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Lbhd1A0A087WPA0 259 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Nr5a1P33242 462 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Eef2P58252 858 aaKnown RBP9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Snap25P60879 206 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Lilrb3P97484 841 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 KhsrpQ3U0V1 748 aaKnown RBP9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ncbp1Q3UYV9 790 aaKnown RBP9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Fxr1Q61584 677 aaKnown RBP9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ube2oQ6ZPJ3 1288 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Fnbp4Q6ZQ03 1031 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Evc2Q8K1G2 1220 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Plcd3Q8K2J0 785 aa9.66□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Pfkfb3A7UAK5 555 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Gm5134E9QAB5 671 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 EzrP26040 586 aaKnown RBP9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 MarcksP26645 309 aaKnown RBP9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Cdh15P33146 784 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Wdhd1P59328 1117 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Sap30bpQ02614 308 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ttbk2Q3UVR3 1243 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Kif22Q3V300 660 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Oxr1Q4KMM3 866 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Krt39Q6IFX4 482 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Calhm4Q8CE93 315 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Tfap4Q9JIZ5 338 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Hmgn5Q9JL35 406 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Akr1c19G3X9Y6 323 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms