RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Tacc2Q9JJG0 1149 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Myh9Q8VDD5 1960 aaKnown RBP5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Col20a1Q923P0 1320 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Tbc1d2B1AVH7 922 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Prl3d1P18121 224 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Slc12a2P55012 1205 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cpa2Q504N0 417 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Tbc1d5Q80XQ2 815 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Slit1Q80TR4 1531 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Irf5P56477 497 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Snrpa1P57784 255 aaKnown RBP5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Edem3Q2HXL6 931 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ecm2Q5FW85 670 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Serpinb6Q60854 378 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Clasp2Q8BRT1 1286 aaKnown RBP5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Golim4Q8BXA1 655 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Apol8A2VDH7 339 aaKnown RBP5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ccdc33Q3ULW6 985 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Serpinb1cQ5SV42 375 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 AceP09470 1312 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ncoa7Q6DFV7 943 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Snd1Q78PY7 910 aaKnown RBP5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Snip1Q8BIZ6 383 aaKnown RBP5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Lmbr1lQ9D1E5 489 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 IqcdQ9D3V1 458 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 CrklP47941 303 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Fhdc1Q3ULZ2 1149 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Zscan22Q8BGS5 496 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ankrd49Q8VE42 238 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cep19Q9CQA8 163 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 HdxQ14B70 692 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ccdc125Q5U465 500 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Leo1Q5XJE5 667 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Erich5Q8K0S2 362 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Bcl11bQ99PV8 884 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Sar1bQ9CQC9 198 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 ParvgQ9ERD8 331 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Krt13P08730 437 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 IntuQ059U7 942 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Rab34Q64008 259 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Lmod1Q8BVA4 595 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cd209bQ8CJ91 325 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Frat2Q8K025 231 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Gngt1Q61012 74 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Coro7Q9D2V7 922 aa5.05□□□□□ -1.6
Prkdc-201ENSMUST00000023352 DSCC1Q14AI0 399 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Gas2l3Q3UWW6 683 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Krt77Q6IFZ6 572 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ctnnbl1Q9CWL8 563 aaKnown RBP5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cdhr2E9Q7P9 1308 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Gm1141B9EJU1 475 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 CidebO70303 219 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 LdhaP06151 332 aaKnown RBP5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 NeblQ0II04 452 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Xpo5Q924C1 1204 aaKnown RBP5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 WtapQ9ER69 396 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Eps15P42567 897 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Sdc2P43407 202 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Pfdn4Q3UWL8 134 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ccdc160Q3UYG1 323 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Sorbs1Q62417 1290 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Retreg2Q6NS82 541 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ano2Q8CFW1 1002 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Enox2Q8R0Z2 598 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cul1Q9WTX6 776 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Mical3Q8CJ19 1993 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Kifc2O08672 792 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Zap70P43404 618 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Olfm3P63056 478 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Gbp10Q000W5 611 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ppp1r21Q3TDD9 780 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ddx24Q9ESV0 857 aaKnown RBP5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Arhgap6O54834 987 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Nub1P54729 614 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 YwhaeP62259 255 aaKnown RBP5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Hspa8P63017 646 aaKnown RBP5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Dact3Q0PHV7 610 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Exoc5Q3TPX4 708 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cdc23Q8BGZ4 597 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 ApobrQ8VBT6 942 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Map3k13Q1HKZ5 959 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Rnf40Q3U319 1001 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Igf2bp2Q5SF07 592 aaKnown RBP5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Slf2Q6P9P0 1278 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Srrm3Q80WV7 648 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Atad2Q8CDM1 1040 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ccdc28bQ8CEG5 200 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Bbs5Q9CZQ9 341 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Fmnl1Q9JL26 1094 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Med1Q925J9 1575 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Kifap3P70188 793 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 KaznQ69ZS8 779 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Cttnbp2nlQ99LJ0 638 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Atp6v1e1P50518 226 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Rnf216P58283 853 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Vps37bQ8R0J7 285 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Klc3Q91W40 508 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Ubxn1Q922Y1 297 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Kif9Q9WV04 790 aa5.04□□□□□ -1.6
Prkdc-201ENSMUST00000023352 Aox4Q3TYQ9 1336 aa5.04□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms